BAC Information

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BAC

Clone NameB6Ng01-223L20
Chromosome16 (Build37)
Map Location 58,625,753 - 58,626,880
singlet/doubletsinglet
Overlap genenone
Upstream geneCol8a1, LOC435480, LOC629342, LOC100043477, Dcbld2, St3gal6, LOC100043480, Gm813
Downstream geneE330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195, Olfr196, Olfr197, Olfr198, Olfr199, Olfr200-ps1, Olfr201, Olfr202, Olfr203, Olfr204, Olfr205, GA_x5J8B7U0478-6-340, Olfr206, Olfr207, Gabrr3, LOC100043803, Mina, BC043118, LOC672884, Arl6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223L20.bB6Ng01-223L20.g
ACCGA038395GA038396
length1,1341,199
definitionB6Ng01-223L20.b B6Ng01-223L20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatttaatgaaatggttgtgttcttagagaggcgctactgattc
tcatgggaacccctattttctttgttttagaggccttcatgatagtcacc
tgagtaattataaacctagataactgaaaaatctattccggctgtgatgg
tatttctggtcttcttgtgcacaaattgtagtttgttaccctgcttttaa
ttaaatgtcaccagtccccccaagaacactgttcaaatgtcagttacccc
attctacttactgtgtgcaggacaatgcgcttattgtgaaagatacaaac
tttatgttagctcttcagtccacagttcattagggaataagagtgtcttc
aatgttcactgattaatcctgtcacttagaaagtaagcttctagtgtttg
gctactgttggtatgttgctcagttcatgcacagtgcatagaggtacata
gctgtattatttctgtgtctccctggagtagactgatgtgccagtttata
aaacagaatgataggcggggctggcaagatggcttggtgtctgttcttcc
aaaggtcctgagttcaaatcccagcaaccacatggtggctcacaaccatc
tgtaatgagatctgatgccctcttctggcgtatctgaagacagatacagt
gtacttacttataataataaataaatcttaaaaaaaataatgatagggag
aaggaacatggatgagagtgaaagaaggaagtggaaaatgacaacactga
ggggtgaaaatctagtcaaccctaaatgaaattatagaagataatagggt
aaatacatctctttatctctctaactctctctctctctctctctctctct
ctctctctagtcagggaaagcagaaccaggagtgatcttgggtatacatg
tgttcacatagaacaaacacagatgtattattatgtagagagacagagac
aaagtaagacaaaagagggagactaagaccagtagaggggagaaggatct
ttattattaaggactttgggctctggcaagttccactatcctctagggat
gggggaggggtccagctagctggagagcctaggtagatcatgctcttgtt
ccagttgtttcttgccaaagagaatttccagtat
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattgggcatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaaatgaagactgaagtgtggacactatgcccctccttagaagtggga
acaaaacacccatggaaggagttacagaaacaaagtatggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcttccaaatgctgacaccattgcatacactagcaagattttactgaa
aggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacagggctccc
aatggaggagctagagaagtacccaaggagctaaagggatcttcaaccct
ataggtggaaccacataatgaacttaccagtacccctgagctctgactct
agctgcaatattgttatcaaaggatgggcctagttcggccattccactga
aagagaggcccattggacactgcagactttgtgtgcctgtaacagggaac
tgcctaggccaaaaagggcgtgtgagaacattgtgcagtacaggactta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_58625753_58626880
seq2: B6Ng01-223L20.b_47_1180

seq1  GAATTCCATTTAATGAAATGGTTGTGTTCTTAGAGAGGCGCTACTGATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTAATGAAATGGTTGTGTTCTTAGAGAGGCGCTACTGATTC  50

seq1  TCATGGGAACCCCTATTTTCTTTGTTTTAGAGGCCTTCATGATAGTCACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGGAACCCCTATTTTCTTTGTTTTAGAGGCCTTCATGATAGTCACC  100

seq1  TGAGTAATTATAAACCTAGATAACTGAAAAATCTATTCCGGCTGTGATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAATTATAAACCTAGATAACTGAAAAATCTATTCCGGCTGTGATGG  150

seq1  TATTTCTGGTCTTCTTGTGCACAAATTGTAGTTTGTTACCCTGCTTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTGGTCTTCTTGTGCACAAATTGTAGTTTGTTACCCTGCTTTTAA  200

seq1  TTAAATGTCACCAGTCCCCCCAAGAACACTGTTCAAATGTCAGTTACCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGTCACCAGTCCCCCCAAGAACACTGTTCAAATGTCAGTTACCCC  250

seq1  ATTCTACTTACTGTGTGCAGGACAATGCGCTTATTGTGAAAGATACAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTACTTACTGTGTGCAGGACAATGCGCTTATTGTGAAAGATACAAAC  300

seq1  TTTATGTTAGCTCTTCAGTCCACAGTTCATTAGGGAATAAGAGTGTCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTTAGCTCTTCAGTCCACAGTTCATTAGGGAATAAGAGTGTCTTC  350

seq1  AATGTTCACTGATTAATCCTGTCACTTAGAAAGTAAGCTTCTAGTGTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTCACTGATTAATCCTGTCACTTAGAAAGTAAGCTTCTAGTGTTTG  400

seq1  GCTACTGTTGGTATGTTGCTCAGTTCATGCACAGTGCATAGAGGTACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTGTTGGTATGTTGCTCAGTTCATGCACAGTGCATAGAGGTACATA  450

seq1  GCTGTATTATTTCTGTGTCTCCCTGGAGTAGACTGATGTGCCAGTTTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTATTATTTCTGTGTCTCCCTGGAGTAGACTGATGTGCCAGTTTATA  500

seq1  AAACAGAATGATAGGCGGGGCTGGCAAGATGGCTTGGTGTCTGTTCTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAATGATAGGCGGGGCTGGCAAGATGGCTTGGTGTCTGTTCTTCC  550

seq1  AAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATC  600

seq1  TGTAATGAGATCTGATGCCCTCTTCTGGCGTATCTGAAGACAGATACAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGAGATCTGATGCCCTCTTCTGGCGTATCTGAAGACAGATACAGT  650

seq1  GTACTTACTTATAATAATAAATAAATCTTAAAAAAAATAATGATAGGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTACTTATAATAATAAATAAATCTTAAAAAAAATAATGATAGGGAG  700

seq1  AAGGAACATGGATGAGAGTGAAAGAAGGAAGTGGAAAATGACAACACTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACATGGATGAGAGTGAAAGAAGGAAGTGGAAAATGACAACACTGA  750

seq1  GGGGTGAAAATCTAGTCAACCCTAAATGAAATTATAGAAGATAATAGGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGAAAATCTAGTCAACCCTAAATGAAATTATAGAAGATAATAGGGT  800

seq1  AAATACATCTCTTTATCTCTCTAACTCTCTCTCTCTCTCTCTCTCTCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACATCTCTTTATCTCTCTAACTCTCTCTCTCTCTCTCTCTCTCTCT  850

seq1  CTCTCTCTAGTCAGGG-AAGCAGAACCAGGAGTGATCTTGGGTATACATG  899
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTCTCTCTAGTCAGGGAAAGCAGAACCAGGAGTGATCTTGGGTATACATG  900

seq1  TGTTCACATAGAACAAACACAGATGTATTATTATGTAGAGAGACAGAGAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCACATAGAACAAACACAGATGTATTATTATGTAGAGAGACAGAGAC  950

seq1  AAAGTAAGACAAAAAGAGGGAGACTAAGACAAGGTAGAGGGGAGAAGGGA  999
      |||||||||| ||||||||||||||||||| | ||||||||||||| |||
seq2  AAAGTAAGAC-AAAAGAGGGAGACTAAGACCA-GTAGAGGGGAGAA-GGA  997

seq1  TCTTTA-TATTAAGGACTTTGGGCTCTGGCAAG-TCCACTAT-CTCTAGG  1046
      |||||| |||||||||||||||||||||||||| |||||||| |||||||
seq2  TCTTTATTATTAAGGACTTTGGGCTCTGGCAAGTTCCACTATCCTCTAGG  1047

seq1  GATGGGGGAGGGG-CCAGCAGGCTGGAGAG-CTAGGGAGAGCATGCTCTG  1094
      ||||||||||||| |||||  ||||||||| ||||| ||| |||||||| 
seq2  GATGGGGGAGGGGTCCAGCTAGCTGGAGAGCCTAGGTAGATCATGCTCTT  1097

seq1  GTTCAA---GTGTCTTTGCAAAGAGAATTTGCAGTAT  1128
      |||| |   || ||||  |||||||||||| ||||||
seq2  GTTCCAGTTGTTTCTTGCCAAAGAGAATTTCCAGTAT  1134