BAC Information

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BAC

Clone NameB6Ng01-223O07
Chromosome16 (Build37)
Map Location 82,993,260 - 82,994,382
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665260
Downstream geneEG545172, LOC100039572
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223O07.bB6Ng01-223O07.g
ACCGA038509GA038510
length1,1221,166
definitionB6Ng01-223O07.b B6Ng01-223O07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtgaacttatgttgacataacatattagcattgaaaagatttt
tttttttcctgagaggtatgtcctgctgaaagatctttctatttgggggc
ccaattggttggtctgcctgcttgactgtttctcttgtggttttgagcat
aatactatcaatttcaaagcttgatggagcactttggggcttctagagtt
ggaatcacaagaatattcctctagggttgtgtcactaactaagcttggat
cttcttaaattatatctgtggaaaaagagaatattgcatcagggtgagat
aggctggggaagcttagcattaaaagctttctgcctacaatatcctgggg
ttttgaattactaacagagagttgtctttcactgatctccaaaatgtgtc
catgatttcataaaatttgccttttataatcaacacttgatgtaaaaaag
ttatgctttgttatttagcttctccaaagaaatttaagtattatttattt
gaacaatttgtcagtggggtatttgagatttctatgtttctcagtgaact
catactatgttattcatgaagattttatttgtttgagacaacatctcact
ttataggtgcgtgaaacttgatagatagtttaagatagccacaaactcat
agtagcaacctgcctcagtcttatgcacgctagtatcatatcagtgagct
atcatagcaagaatggtaaacagcattttaatatatttatttttagaaaa
gtcactttatgcattatatctcattttttcattttaattgagctctatat
ttgtattgcatccttgaacttattattttagtttttgtcatactttgaaa
tagcagaaacagacactctttcaaatgacaggctgggcattgatatttgt
taaactcttgaaataagtaatatagttttctaaaactgtattatctttgg
aggttgcagtcttatacatgggttaacacaaactgacacaaactgttatg
acacattcattttttatggggttgtttttacatttttctagtgctccgct
agaagaagtcagataacatcttgcactcattagtcagcgacattaatatc
actccatatttcagttatgatg
gaattctttgtttagctctgtaccccatttttacgagggttatttggttt
tctggagtctaacttcttgagttctttatatatattggatattagccgcc
taatggatttaggcttggtaaatatcttctcccaatctgttggttgccct
tttgtcttattgacggtgtcttttgccttacggaagctttgtaattttat
gaggtcctatttgtcgatttatcctgagcttatccctgtcccacaggaaa
taaacacaggacacgccaggttcttccgtggttaactttacttcaataac
atagtgaggtagacagaaggctcagaaagtgtgtggcttaaatacttttt
ggtgatgtgtctaaactaggactggtagcaacactcacgattctcatgca
acctagggataggctaaacaccccaggggttgggctagtgccctggggga
tggaccagtgccccgaaaatgggctggtaacttttggtgggtttttgctt
ttagcacatgcgcatatagcttgttctttgtttaggtggcataaggcaca
gcggagccagcgccatcttaagatggtaaatgttattgcggctctccaca
tcaattcttttcttagagcacaaaccattggtgctatgttcaggaatttt
tcccctgtgcccaaatcttctaggctctttcccactttctcctctatccc
tcacaccagtcagaatggccaagatcaaaaactcaggtgacagcagatgc
tagcaaggatatggagaaagaggaacactcctccattgctggtgggattg
caagatggtacaaccactctggaaagagtttggcagtttctcatcaagtt
gaacatagtattactagaagatccagcaataccctgaattcatgaattct
tagacaaatgtatggatttggaggatatcattctaagtgaggcacccaat
cacaaaagacacacatgatttgcactgactgacaaatggatattagccag
atcttagataccaagatacaatttgcaaaacacatgaaactcaggagagg
aatgccaagtgtgatacttcaatctcctttgagagaaccaataccattga
aggagttttagaccagtccgagtgcagaaccttgatgatgaccattccag
aacctatgggaatact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_82993260_82994382
seq2: B6Ng01-223O07.b_46_1167 (reverse)

seq1  CATCATAACTGAAATAATGGGAAGTGATTAATAAATGTCGCTGACTTAAA  50
      ||||||||||||||| ||||  ||||||  || |||||||||||||  ||
seq2  CATCATAACTGAAAT-ATGG--AGTGAT--ATTAATGTCGCTGACT--AA  43

seq1  TGAGTTGCCAGATG-TATCTGACT--CTCTAGC-GAGCACTAGAAAAATG  96
      |||| ||| ||||| |||||||||   |||||| ||||||||||||||||
seq2  TGAG-TGCAAGATGTTATCTGACTTCTTCTAGCGGAGCACTAGAAAAATG  92

seq1  T-AAAACAACCCCAT--AAAATGAATGTGTCATAACAGTTTGTGTCAGTT  143
      | |||||||||||||  |||||||||||||||||||||||||||||||||
seq2  TAAAAACAACCCCATAAAAAATGAATGTGTCATAACAGTTTGTGTCAGTT  142

seq1  TGTGTTAA-CCATGTATAAGACTGCAACCTCCAAAGATAATACAGTTTTA  192
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTAACCCATGTATAAGACTGCAACCTCCAAAGATAATACAGTTTTA  192

seq1  GAAAACTATATTACTTATTTCAAGAGTTTAACAAATATCAATGCCCAGCC  242
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GAAAACTATATTACTTATTTCAAGAGTTTAACAAATATCAATGCCCAG-C  241

seq1  CTGTCATTTGAAAGAGTGTCTGTTTCTGCTATTTCAAAGTATGACAAAAA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCATTTGAAAGAGTGTCTGTTTCTGCTATTTCAAAGTATGACAAAAA  291

seq1  CTAAAATAATAAGTTCAAGGATGCAATACAAATATAGAGCTCAATTAAAA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATAATAAGTTCAAGGATGCAATACAAATATAGAGCTCAATTAAAA  341

seq1  TGAAAAAATGAGATATAATGCATAAAGTGACTTTTCTAAAAATAAATATA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAATGAGATATAATGCATAAAGTGACTTTTCTAAAAATAAATATA  391

seq1  TTAAAATGCTGTTTACCATTCTTGCTATGATAGCTCACTGATATGATACT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGCTGTTTACCATTCTTGCTATGATAGCTCACTGATATGATACT  441

seq1  AGCGTGCATAAGACTGAGGCAGGTTGCTACTATGAGTTTGTGGCTATCTT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTGCATAAGACTGAGGCAGGTTGCTACTATGAGTTTGTGGCTATCTT  491

seq1  AAACTATCTATCAAGTTTCACGCACCTATAAAGTGAGATGTTGTCTCAAA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATCTATCAAGTTTCACGCACCTATAAAGTGAGATGTTGTCTCAAA  541

seq1  CAAATAAAATCTTCATGAATAACATAGTATGAGTTCACTGAGAAACATAG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAAATCTTCATGAATAACATAGTATGAGTTCACTGAGAAACATAG  591

seq1  AAATCTCAAATACCCCACTGACAAATTGTTCAAATAAATAATACTTAAAT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCAAATACCCCACTGACAAATTGTTCAAATAAATAATACTTAAAT  641

seq1  TTCTTTGGAGAAGCTAAATAACAAAGCATAACTTTTTTACATCAAGTGTT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGGAGAAGCTAAATAACAAAGCATAACTTTTTTACATCAAGTGTT  691

seq1  GATTATAAAAGGCAAATTTTATGAAATCATGGACACATTTTGGAGATCAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATAAAAGGCAAATTTTATGAAATCATGGACACATTTTGGAGATCAG  741

seq1  TGAAAGACAACTCTCTGTTAGTAATTCAAAACCCCAGGATATTGTAGGCA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGACAACTCTCTGTTAGTAATTCAAAACCCCAGGATATTGTAGGCA  791

seq1  GAAAGCTTTTAATGCTAAGCTTCCCCAGCCTATCTCACCCTGATGCAATA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTTTTAATGCTAAGCTTCCCCAGCCTATCTCACCCTGATGCAATA  841

seq1  TTCTCTTTTTCCACAGATATAATTTAAGAAGATCCAAGCTTAGTTAGTGA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTTTCCACAGATATAATTTAAGAAGATCCAAGCTTAGTTAGTGA  891

seq1  CACAACCCTAGAGGAATATTCTTGTGATTCCAACTCTAGAAGCCCCAAAG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACCCTAGAGGAATATTCTTGTGATTCCAACTCTAGAAGCCCCAAAG  941

seq1  TGCTCCATCAAGCTTTGAAATTGATAGTATTATGCTCAAAACCACAAGAG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCATCAAGCTTTGAAATTGATAGTATTATGCTCAAAACCACAAGAG  991

seq1  AAACAGTCAAGCAGGCAGACCAACCAATTGGGCCCCCAAATAGAAAGATC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTCAAGCAGGCAGACCAACCAATTGGGCCCCCAAATAGAAAGATC  1041

seq1  TTTCAGCAGGACATACCTCTCAGGAAAAAAAAAAATCTTTTCAATGCTAA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCAGGACATACCTCTCAGGAAAAAAAAAAATCTTTTCAATGCTAA  1091

seq1  TATGTTATGTCAACATAAGTTCACTGAATTC  1123
      |||||||||||||||||||||||||||||||
seq2  TATGTTATGTCAACATAAGTTCACTGAATTC  1122