BAC Information

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BAC

Clone NameB6Ng01-224B21
Chromosome16 (Build37)
Map Location 27,761,417 - 27,906,671
singlet/doubletdoublet
Overlap genenone
Upstream geneGm606, Ostn, Uts2d, Ccdc50
Downstream geneFgf12, 1600021P15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224B21.bB6Ng01-224B21.g
ACCGA038669GA038670
length1,107594
definitionB6Ng01-224B21.b B6Ng01-224B21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,761,417 - 27,762,528)(27,906,131 - 27,906,671)
sequence
gaattcttcttaccgacataataattcttacgtgtcttcctgacagcata
atttaccatgatccatcatgaatacactcttgtttcctcaaagtaactgc
aatagtaaatatattaacattttctcatcaagaagtggtgacaatcacct
cctttaccagaaaacctttttctttaaaattgggtacatagtttcaactc
ctaattaaacctcacctcttactacatgttggcttcctaacaaaaaactc
atgtcttcatcttctttaccctcctcgtgaaacagggatatgtcaatgtc
aacgattctgcagcatggccatctttgcagcattttgtttctatcgggct
ggaatgactcatacctgaggtgtgccataccttaatgtttggctcttttg
ccttttcagtggtacatgagctagcatttaagacttgaagatacaagtta
catataatttgggagaacataagaatgaaaggtcagtgataaacctcaag
attctcattgcatttgactagcttttatccaattgtaaaatgtctgtatt
ttaaaaatatcttagtaactctattgcattaaccctactttcttctattt
tatacctaatattttagatttgattatgtaactctgataatactgatacc
ctgttaaaattattatagagaagaatctagaaagttcatttaaatatttt
ccaggttttcaagatagctttgaataaaatttcaaaaaaatattttaaac
atctatttagtattctcttttctgcttcttgagtttttaaagaccctgta
taagttatcaccaaggatgtagctttcccacttcctatagcatatttaaa
tatttttctgcctgcctgtgccatttaaattaaaagctagagataaaagt
tgactatgtccaagtataatattcctcatatttatttcagagttggaaca
ttatattttatccatagtagatagggcatagtacttagtgtataattgtc
ccattgtcaacaatttgtctatcatatattagcagcagtgtcagcttcag
tcatgtacattgtaataaaatattcaagactaaatatggacaatatgcta
atttttt

gaattcactgccaggtggacacagatacacccatatgtccctagtgaagt
acagtctggccccaacacataaagttccaaccagctgtaaaccgatttat
caacacatgaacctgtggacacatttcagattcaaactcatattctttct
tttagtgtttgtctgtctctctgtaatgtggcacattgaaaataatgaca
tatgggtgttcccttcccccagtcttgagcaggctaaacagacctccagt
gcttgccacaatgcctttaacaacccaggtggagtcattgtcttactgcc
tgcacctgcaatttcctacaggaacttagaagaatagattgcccactgag
cttgctttgcaatttaatcaagctaaaacaaaggataggttttgtggctt
tccctttataaactggagatgctgaattaaagtttgagccttgatcagaa
cctttgtcttggcttcctccttctctctcatcctgttcttttcaagtcta
gctcccctttcaggaaatccagttcacccatggctgctggatggctacag
gttgcaaccaaatgaggggtctgaaaacgggggggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_27761417_27762528
seq2: B6Ng01-224B21.b_47_1153

seq1  GAATTCTTCTTACCGACATAATAATTCTTACGTGTCTTCCTGACAGCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTACCGACATAATAATTCTTACGTGTCTTCCTGACAGCATA  50

seq1  ATTTACCATGATCCATCATGAATACACTCTTGTTTCCTCAAAGTAACTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACCATGATCCATCATGAATACACTCTTGTTTCCTCAAAGTAACTGC  100

seq1  AATAGTAAATATATTAACATTTTCTCATCAAGAAGTGGTGACAATCACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTAAATATATTAACATTTTCTCATCAAGAAGTGGTGACAATCACCT  150

seq1  CCTTTACCAGAAAACCTTTTTCTTTAAAATTGGGTACATAGTTTCAACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTACCAGAAAACCTTTTTCTTTAAAATTGGGTACATAGTTTCAACTC  200

seq1  CTAATTAAACCTCACCTCTTACTACATGTTGGCTTCCTAACAAAAAACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTAAACCTCACCTCTTACTACATGTTGGCTTCCTAACAAAAAACTC  250

seq1  ATGTCTTCATCTTCTTTACCCTCCTCGTGAAACAGGGATATGTCAATGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTCATCTTCTTTACCCTCCTCGTGAAACAGGGATATGTCAATGTC  300

seq1  AACGATTCTGCAGCATGGCCATCTTTGCAGCATTTTGTTTCTATCGGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGATTCTGCAGCATGGCCATCTTTGCAGCATTTTGTTTCTATCGGGCT  350

seq1  GGAATGACTCATACCTGAGGTGTGCCATACCTTAATGTTTGGCTCTTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGACTCATACCTGAGGTGTGCCATACCTTAATGTTTGGCTCTTTTG  400

seq1  CCTTTTCAGTGGTACATGAGCTAGCATTTAAGACTTGAAGATACAAGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCAGTGGTACATGAGCTAGCATTTAAGACTTGAAGATACAAGTTA  450

seq1  CATATAATTTGGGAGAACATAAGAATGAAAGGTCAGTGATAAACCTCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAATTTGGGAGAACATAAGAATGAAAGGTCAGTGATAAACCTCAAG  500

seq1  ATTCTCATTGCATTTGACTAGCTTTTATCCAATTGTAAAATGTCTGTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCATTGCATTTGACTAGCTTTTATCCAATTGTAAAATGTCTGTATT  550

seq1  TTAAAAATATCTTAGTAACTCTATTGCATTAACCCTACTTTCTTCTATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATATCTTAGTAACTCTATTGCATTAACCCTACTTTCTTCTATTT  600

seq1  TATACCTAATATTTTAGATTTGATTATGTAACTCTGATAATACTGATACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCTAATATTTTAGATTTGATTATGTAACTCTGATAATACTGATACC  650

seq1  CTGTTAAAATTATTATAGAGAAGAATCTAGAAAGTTCATTTAAATATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAAAATTATTATAGAGAAGAATCTAGAAAGTTCATTTAAATATTTT  700

seq1  CCAGGTTTTCAAGATAGCTTTGAATAAAATTTCAAAAAAATATTTTAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTTTTCAAGATAGCTTTGAATAAAATTTCAAAAAAATATTTTAAAC  750

seq1  ATCTATTTAGTATTCTCTTTTCTGCTTCTTGAGTTTTTAAAGACCCTGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTTAGTATTCTCTTTTCTGCTTCTTGAGTTTTTAAAGACCCTGTA  800

seq1  TAAGTTATCACCAAGGATGTAGCTTTCCCACTTCCTATAGCATATTTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTATCACCAAGGATGTAGCTTTCCCACTTCCTATAGCATATTTAAA  850

seq1  TATTTTTCTGCCTGCCTGTGCCATTTAAATTAAAAGCTAGAGATAAAAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCTGCCTGCCTGTGCCATTTAAATTAAAAGCTAGAGATAAAAGT  900

seq1  TGACTATGTCCAAGTATAATATTCCTCATATTTATTTCAGAGTTGGAACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTATGTCCAAGTATAATATTCCTCATATTTATTTCAGAGTTGGAACA  950

seq1  TTATATTTTATCCATAGTAGATAGGGCATAGTACTTAGTTGTATAATTGT  1000
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTATATTTTATCCATAGTAGATAGGGCATAGTACTTAG-TGTATAATTGT  999

seq1  CCCATTGTCCAACAATTTGTCTATCATATATTAGCAAGCAGTGGTCAGCT  1050
      |||||||| |||||||||||||||||||||||||| |||||| |||||||
seq2  CCCATTGT-CAACAATTTGTCTATCATATATTAGC-AGCAGT-GTCAGCT  1046

seq1  TCAGTCATGTACATTGT-ATAAAATATTCCAGACATAAATAATTGACAAT  1099
      ||||||||||||||||| ||||||||||| |||| ||||| || ||||||
seq2  TCAGTCATGTACATTGTAATAAAATATTCAAGAC-TAAAT-ATGGACAAT  1094

seq1  ATGCTAAATTTTT  1112
      ||||||| |||||
seq2  ATGCTAATTTTTT  1107


seq1: chr16_27906131_27906671
seq2: B6Ng01-224B21.g_119_659 (reverse)

seq1  CCCCCCCCCCCCCCCCGTTTTCAGACCCCTCATTTGGTTGCAACCTGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCCCCCCGTTTTCAGACCCCTCATTTGGTTGCAACCTGTAG  50

seq1  CCATCCAGCAGCCATGGGTGAACTGGATTTCCTGAAAGGGGAGCTAGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCAGCAGCCATGGGTGAACTGGATTTCCTGAAAGGGGAGCTAGACT  100

seq1  TGAAAAGAACAGGATGAGAGAGAAGGAGGAAGCCAAGACAAAGGTTCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGAACAGGATGAGAGAGAAGGAGGAAGCCAAGACAAAGGTTCTGA  150

seq1  TCAAGGCTCAAACTTTAATTCAGCATCTCCAGTTTATAAAGGGAAAGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGCTCAAACTTTAATTCAGCATCTCCAGTTTATAAAGGGAAAGCCA  200

seq1  CAAAACCTATCCTTTGTTTTAGCTTGATTAAATTGCAAAGCAAGCTCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCTATCCTTTGTTTTAGCTTGATTAAATTGCAAAGCAAGCTCAGT  250

seq1  GGGCAATCTATTCTTCTAAGTTCCTGTAGGAAATTGCAGGTGCAGGCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAATCTATTCTTCTAAGTTCCTGTAGGAAATTGCAGGTGCAGGCAGT  300

seq1  AAGACAATGACTCCACCTGGGTTGTTAAAGGCATTGTGGCAAGCACTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAATGACTCCACCTGGGTTGTTAAAGGCATTGTGGCAAGCACTGGA  350

seq1  GGTCTGTTTAGCCTGCTCAAGACTGGGGGAAGGGAACACCCATATGTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTTTAGCCTGCTCAAGACTGGGGGAAGGGAACACCCATATGTCAT  400

seq1  TATTTTCAATGTGCCACATTACAGAGAGACAGACAAACACTAAAAGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCAATGTGCCACATTACAGAGAGACAGACAAACACTAAAAGAAAG  450

seq1  AATATGAGTTTGAATCTGAAATGTGTCCACAGGTTCATGTGTTGATAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGAGTTTGAATCTGAAATGTGTCCACAGGTTCATGTGTTGATAAAT  500

seq1  CGGTTTACAGCTGGTTGGAACTTTATGTGTTGGGGCCAGAC  541
      |||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTTACAGCTGGTTGGAACTTTATGTGTTGGGGCCAGAC  541


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