BAC Information

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BAC

Clone NameB6Ng01-224F10
Chromosome16 (Build37)
Map Location 47,857,841 - 47,858,951
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC628757, LOC628776
Downstream geneEG667741, EG639644, EG637273, Dppa4, Dppa2, EG433023, Morc1, Trat1, EG667501, Retnlb, Retnla
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224F10.bB6Ng01-224F10.g
ACCGA038824GA038825
length1,116720
definitionB6Ng01-224F10.b B6Ng01-224F10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaccagatcacatatcagggtagaagagataacacatcaaatct
atagtgccctctcagctgcttcccaaggtgagtgacattaactttgtgtc
atacagaccagttctttgtcagaggtttttgcacccatatggatagaacc
accgagtttctcccaaggcagagtcagaaggacgagctttagataatttt
tctctgtgcaatatttttgggtaagtgtagcaatttaagaacagttcggt
gcagctctttacaatcaaagatgtcatcgctatccctaaacagactgaat
gcaggcacctaggaggtgtggaaatggtgatagagtagtttttaaatgtg
tccatatttcatgtgggtgggttgctgttgtttttgttggatgtttttta
tgctattttgtgggatgacttctgtctcagttctgttttaagaaactcta
agccccaaccattcaacatgtcattaccatcctgattttattgagagtat
tatatcttcaactaccaaaatagaactaactgaaattaacaaatgtaaaa
atcattctgataaaaaaaaaaggatactggaaaatcggatttcagcctgc
ttcatcaataattgataatagcctcgatgttccaatttgcccttttctgt
taaatactgtgaaaaaaaagatttgaaaattatttgaactatgtcttaga
aatgatttatgccccctccatactccatctatacattttcacagttctat
tctctcaaactgtgtatagaactgttatcaaccaagaattgagtcattaa
aagcatgcaactaataaaactgaggaacgcaatcagagggaagtggaaat
tgtaataaactagaaaatacattatcctaaaagtatttaggttaattttt
ttttataacagtttagtagatttttgacggtcttctgtgtctcagaagct
accagttcattatttacaaagcctggggtatcctcctcctctttaggttt
taactggcactccagtggtcaccagctagtgttcagcaacctctttcact
tctgggaaagtatacagagtacagtttcagaatactgcagtggagaacaa
gatgggggtggggtgg

gaattctttgtttagctctgagccccattttttttttctgttcttatgcc
attttttattaggtatttagctcatttacatttccaatgctataccaaaa
gtcccccatacccacccacccccactcccctacccatccactcccccttt
ttggccctggcgttcccctgtactggggcatataaagtttgcgtgtccaa
tggagccccatttttttaatggggttatttgaatttctggagtccatctt
cttgagctctttgtatatattggatattagtcccctatcagatttatgat
tggtaaaaattctttccaaatctgttggtggcctttttgttttattgaca
gtatcttttgccttacagaaactttgcaattttatgagatatcatttgtt
gattcttgatcttgtagcacaagccatttctgttctgttcaggatgtttt
cccttgtgcccatatctttgaggctttcccccactttttcctttataaat
ttcagtgtctctggttttatgtggagttctttgatccacatagagttgag
ctttgtacaaggagataagaattgatcaactctcattcttctacatgaca
acctccatttgtgccagcaccattttgttgaaaatgctgtctttttttcc
acctggatgggttttagctccccttgtccgaagatcaagtgaccataggt
tgtgtgggtttcatgtctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_47857841_47858951
seq2: B6Ng01-224F10.b_46_1161

seq1  GAATTCAACCAGATCACATATCAGGGTAGAAGAGATAACACATCAAATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCAGATCACATATCAGGGTAGAAGAGATAACACATCAAATCT  50

seq1  ATAGTGCCCTCTCAGCTGCTTCCCAAGGTGAGTGACATTAACTTTGTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGCCCTCTCAGCTGCTTCCCAAGGTGAGTGACATTAACTTTGTGTC  100

seq1  ATACAGACCAGTTCTTTGTCAGAGGTTTTTGCACCCATATGGATAGAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGACCAGTTCTTTGTCAGAGGTTTTTGCACCCATATGGATAGAACC  150

seq1  ACCGAGTTTCTCCCAAGGCAGAGTCAGAAGGACGAGCTTTAGATAATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGAGTTTCTCCCAAGGCAGAGTCAGAAGGACGAGCTTTAGATAATTTT  200

seq1  TCTCTGTGCAATATTTTTGGGTAAGTGTAGCAATTTAAGAACAGTTCGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGCAATATTTTTGGGTAAGTGTAGCAATTTAAGAACAGTTCGGT  250

seq1  GCAGCTCTTTACAATCAAAGATGTCATCGCTATCCCTAAACAGACTGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTCTTTACAATCAAAGATGTCATCGCTATCCCTAAACAGACTGAAT  300

seq1  GCAGGCACCTAGGAGGTGTGGAAATGGTGATAGAGTAGTTTTTAAATGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCACCTAGGAGGTGTGGAAATGGTGATAGAGTAGTTTTTAAATGTG  350

seq1  TCCATATTTCATGTGGGTGGGTTGCTGTTGTTTTTGTTGGATGTTTTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATTTCATGTGGGTGGGTTGCTGTTGTTTTTGTTGGATGTTTTTTA  400

seq1  TGCTATTTTGTGGGATGACTTCTGTCTCAGTTCTGTTTTAAGAAACTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATTTTGTGGGATGACTTCTGTCTCAGTTCTGTTTTAAGAAACTCTA  450

seq1  AGCCCCAACCATTCAACATGTCATTACCATCCTGATTTTATTGAGAGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCAACCATTCAACATGTCATTACCATCCTGATTTTATTGAGAGTAT  500

seq1  TATATCTTCAACTACCAAAATAGAACTAACTGAAATTAACAAATGTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTTCAACTACCAAAATAGAACTAACTGAAATTAACAAATGTAAAA  550

seq1  ATCATTCTGATAAAAAAAAAAGGATACTGGAAAATCGGATTTCAGCCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCTGATAAAAAAAAAAGGATACTGGAAAATCGGATTTCAGCCTGC  600

seq1  TTCATCAATAATTGATAATAGCCTCGATGTTCCAATTTGCCCTTTTCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCAATAATTGATAATAGCCTCGATGTTCCAATTTGCCCTTTTCTGT  650

seq1  TAAATACTGTGAAAAAAAAGATTTGAAAATTATTTGAACTATGTCTTAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACTGTGAAAAAAAAGATTTGAAAATTATTTGAACTATGTCTTAGA  700

seq1  AATGATTTATGCCCCCTCCATACTCCATCTATACATTTTCACAGTTCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTTATGCCCCCTCCATACTCCATCTATACATTTTCACAGTTCTAT  750

seq1  TCTCTCAAACTGTGTATAGAACTGTTATCAACCAAGAATTGAGTCATTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCAAACTGTGTATAGAACTGTTATCAACCAAGAATTGAGTCATTAA  800

seq1  AAGCATGCAACTAATAAAACTGAGGAACGCAATCAGAGGGAAGTGGAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATGCAACTAATAAAACTGAGGAACGCAATCAGAGGGAAGTGGAAAT  850

seq1  TGTAATAAACTAGAAAATACA-TATCCTAAAAGTATTTAGGTTAATTTTT  899
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGTAATAAACTAGAAAATACATTATCCTAAAAGTATTTAGGTTAATTTTT  900

seq1  TTTTATAACAG-TTAGTAGATTTTTGACGGTCTTCTGTGTCTCAGAAGCT  948
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAACAGTTTAGTAGATTTTTGACGGTCTTCTGTGTCTCAGAAGCT  950

seq1  ACCAGTTCA-TATTTACAAAGCCTGGGGTATCCTCCTCCTCTTTA-GTTT  996
      ||||||||| ||||||||||||||||||||||||||||||||||| ||||
seq2  ACCAGTTCATTATTTACAAAGCCTGGGGTATCCTCCTCCTCTTTAGGTTT  1000

seq1  TTACTGGCCACT-CAGTGGTCACCAGCTAGTGTTCAGCAAACTCTTTTCA  1045
      | ||||| |||| ||||||||||||||||||||||||||| ||| |||||
seq2  TAACTGG-CACTCCAGTGGTCACCAGCTAGTGTTCAGCAACCTC-TTTCA  1048

seq1  CTCCT-GGAAAGTATACAGAGTACCAGTTCCAG-ATACTGCAAGTGAGAA  1093
      || || ||||||||||||||||| ||||| ||| ||||||||   |||||
seq2  CTTCTGGGAAAGTATACAGAGTA-CAGTTTCAGAATACTGCAGTGGAGAA  1097

seq1  CAAGA--GGGGTGGGTGTGG  1111
      |||||  |||||||| ||||
seq2  CAAGATGGGGGTGGG-GTGG  1116


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