BAC Information

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BAC

Clone NameB6Ng01-226I18
Chromosome16 (Build37)
Map Location 59,592,048 - 59,592,564
singlet/doubletsinglet
Overlap geneLOC672884
Upstream geneGm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195, Olfr196, Olfr197, Olfr198, Olfr199, Olfr200-ps1, Olfr201, Olfr202, Olfr203, Olfr204, Olfr205, GA_x5J8B7U0478-6-340, Olfr206, Olfr207, Gabrr3, LOC100043803, Mina, BC043118
Downstream geneArl6, Epha6, LOC100043804
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226I18.bB6Ng01-226I18.g
ACCGA040461GA040462
length5111,111
definitionB6Ng01-226I18.b B6Ng01-226I18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tgtgatagagtcaggtgtggggagatttgcaacctgggctctgaagaagc
tggatgtataaaactagaagaggcaactaaccagccatgtggcagacttg
gaataggataaacaggttatataagccacacgctagtgaggggtggggga
ggaggtgtagcctaaccttacggccataagcattgtgataatcaataggc
ctctgagttgtgatccaagaaattgatcgtgggtgaaaaaaatcaaggtt
accagagaaaggagtttgccaatatagtggtgcacgcctgtgatgccagt
atcagagaggctaagcaggaaggtcttaagttcaaggccaatctgagcta
cttactcggtgagtttaagagtggcatccagtcacagaaagaaagaaaga
aagaaagaaagaaagaaagaaagaaagaaagaaagaaaaagaaaggaagg
aaggaaggaaggaagagagggagatagagaataaaaagaaaaaaagaaag
aaagaagagaa
gaattctttgaagtagcagtttaatgtctacattcatttcggagcgactt
gggtgagactgccccatcagaactgtgggtcatagatgagtatccacata
tacagacactgctggacctccccagtcaaagcaatgcatgagaaagaaag
cccagatgcatattggtatccggcagatcatattccagaaataaaaatca
ctaccgatttatatgattacaaagacattttcccctcttgaaaacctagc
tgtaaagtactcatgggaacatgtagcatgcatacatcactaccttgcct
gtggtatgctgagggcagagttcatccaggacctcaagcaaatcaaagga
agggccgtatttcattgatcagcactcgaaagtctttcatatcatttcgt
tggttctgttggtattaaagaccagcctttgtccatggtgactggatagg
atgcatggggttatttcaatctttttgtatttgtttaggcctgttttatg
accattatatggacaattttggagaaagtatcatgaagtgatgagaagta
cttatattcttttgctttaggatgaaattttctataaatatctgttagat
tcatttggttcataacttctgttagttttaccgtgtctctgtttagtctc
tgtttccatgatctttcctgatctttccattgctgagagttgtggtgttg
aggtctcccactattaatgtgtggggtgccatgtgtgctttgagctttag
taaagtttcttttatgaatgtgggtaccgtggcatttggagcatagatgt
tcatatttgggagttcatcttggtagatttttcctttgaccagtatgaag
tgtccttccttatctcttttgataacttttagttaaaagttgattttgtt
gatattagaatggctactccagcttgtttcttagaacgacttgcttggaa
aattgttttccaaccttttactctgaggtaatgtctgtatttgtcattga
gtgcgttttctgtatgcagcaaaatgctggttctgttacatatcagttgt
agtctatgtcttgttggagggggattagttcattgatgaatcgggatatt
taaaggaatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_59592048_59592564
seq2: B6Ng01-226I18.b_44_560

seq1  GAATTCTGTGATAGAGTCAGGTGTGGGGAGATTTGCAACCTGGGCTCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGATAGAGTCAGGTGTGGGGAGATTTGCAACCTGGGCTCTGA  50

seq1  AGAAGCTGGATGTATAAAACTAGAAGAGGCAACTAACCAGCCATGTGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTGGATGTATAAAACTAGAAGAGGCAACTAACCAGCCATGTGGCA  100

seq1  GACTTGGAATAGGATAAACAGGTTATATAAGCCACACGCTAGTGAGGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGGAATAGGATAAACAGGTTATATAAGCCACACGCTAGTGAGGGGT  150

seq1  GGGGGAGGAGGTGTAGCCTAACCTTACGGCCATAAGCATTGTGATAATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAGGAGGTGTAGCCTAACCTTACGGCCATAAGCATTGTGATAATCA  200

seq1  ATAGGCCTCTGAGTTGTGATCCAAGAAATTGATCGTGGGTGAAAAAAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCCTCTGAGTTGTGATCCAAGAAATTGATCGTGGGTGAAAAAAATC  250

seq1  AAGGTTACCAGAGAAAGGAGTTTGCCAATATAGTGGTGCACGCCTGTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTACCAGAGAAAGGAGTTTGCCAATATAGTGGTGCACGCCTGTGAT  300

seq1  GCCAGTATCAGAGAGGCTAAGCAGGAAGGTCTTAAGTTCAAGGCCAATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTATCAGAGAGGCTAAGCAGGAAGGTCTTAAGTTCAAGGCCAATCT  350

seq1  GAGCTACTTACTCGGTGAGTTTAAGAGTGGCATCCAGTCACAGAAAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTACTTACTCGGTGAGTTTAAGAGTGGCATCCAGTCACAGAAAGAAA  400

seq1  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAA  450

seq1  GGAAGGAAGGAAGGAAGGAAGAGAGGGAGAGAGAGAAAAAAAAGAAAAAA  500
      |||||||||||||||||||||||||||||| |||||| ||||||||||||
seq2  GGAAGGAAGGAAGGAAGGAAGAGAGGGAGATAGAGAATAAAAAGAAAAAA  500

seq1  AGAAAGAAAGAAGAGAA  517
      |||||||||||||||||
seq2  AGAAAGAAAGAAGAGAA  517