BAC Information

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BAC

Clone NameB6Ng01-227A13
Chromosome16 (Build37)
Map Location 70,175,642 - 70,408,380
singlet/doubletdoublet
Overlap geneEG664930, Gbe1
Upstream geneSpeer2
Downstream geneD16Ertd519e, LOC100039231
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-227A13.bB6Ng01-227A13.g
ACCGA040809GA040810
length1,1361,192
definitionB6Ng01-227A13.b B6Ng01-227A13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,407,232 - 70,408,380)(70,175,642 - 70,176,830)
sequence
gaattcaaacaggagaacaacaggaagagaatcccatgtcttagtatgaa
ggccactctgaacaatgtatgaaaattgggacaggaaatatgaagttttg
taatgatatggtcatttttggaaaacaatatgaaactgaaactgtgttta
gggcacatagtaataaacgcttggcttgggtttggtttttcttgtactgt
actacaaagtcaagagaaaaactgccattggccctcccttccttccttgt
gtccagaactgacagtgggatactcccaggaaaaaaaaaaaaaaaaacca
cacataaaatccaatccttgttaactactatattaggaaagaaaaaggaa
aaaaaaatgattgttcttaagttataggtaaaagcataaaatacaaaaag
gaacacatctactttcccacttatctttgcagtcacaaataaagaacaga
taaaaatataatattactttatatatttacaatttttttgtgtttcctat
caatatgctaaggaatttacatgcacatacacaaacacacacgaaagaaa
agagggaagaagagtcacttcttaacagggctttattctcatctacagga
aagaggcccttctctgctcctttatttgagttcattaacattcattgtat
ttgcaaacacaaagaatcatcatatttgccgtaaagggaagcatctaatt
ctacctgtgcactctctcaaaaattagatgtttcagggtcttaaggttga
ttaagttgaactgggtaacaaatgaagtgaatgaggattttctgtgggtc
acagaagcaaaaagaaatatcacatataataataagtaaggccattgcat
gcgacagataataagaataggcagaatcttatgatccgcgtacactgcag
gaaaggaaggacccagtggaggcctcaaatcattaagtattctcctgagc
aatgtgctctccacttcttgcatctagaggggttatttttgaagttggaa
taaaaggacaatttccccatggttcttttcttcgcccgagcaataagtaa
tgcaaaataaagtaacagaagaagaaaaaaaaagtcataactgcatgaaa
tttataaattgaaagcagttaacgttaagaaactaa
gaattccaggaagacgtttgcttctaacacaaacagtgcatcttttcctt
atcagcaaatgggggttctgcagctcagatgcagtttgcctgttacatct
ccccagccctgagctcaaaagaaaacaacctctccagttatatccagggc
ccaaaccataaacccaccgacagaaaactgtctcaatgtggtgtggctcc
tttagccaaccctcttgtttttcccctagttgtttgtgtttctctctgct
aacaaagctcctttagcccttaagaggtcgtaaacctaagtggagagtcg
ctggattttcttgccagggagtgttgccttcagcaaggacaaccctccaa
atggatctcctcctctctccatagaaatttctcactgttctctctggctg
tctttcctatgggggacaggggaaggttaattggtagttttttctttgaa
tataaatctatttagcgagttatttgattattttgatgttagttttagaa
ggctagtttgcagagtgcccttttgttttctttcttttattttgagattt
atttttaaatgtagatgcatataaaccaagtccaggtctgtttctaaatt
atttaatcgagtagacatatttcgccaggcagcttatccttgcggctcag
tgtgtgtctgtaaaaactggaaagaaaataataaaaatgaaagataaaaa
aaaagcatggataaaaatctcttgcacagaaggaactcagatccagttct
caattttatgtgaactatgatacataaagaaagaggttataaaataccaa
agattcaaagttttgtccttaagttcagtaaactcaactaaacatcagtt
cctggagtcaccactccctatgttcgaccttcctgtcactcttcacaagc
ctcctgatgttttcttacacagctcttgtgatagtctgaaacgttggctc
tttaaacttgttaattaacccccctgtacccaagaaaaagtagatttcca
gagacaaggacacgtttgacatttccttataactgaagcatcttctcaaa
atggagattggtagaattttataaattatttgttccaccaacaagaaact
aaaatctggaagtggcaaatgttcaagttgagataatattcacttcctaa
aacactagctgctgatttagagaacattcacatcacggtttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_70407232_70408380
seq2: B6Ng01-227A13.b_44_1179 (reverse)

seq1  TTAGTTTCCTAACCTTTTAACTGCTTTCCATTTTTATAAAATTTCATTGC  50
      |||||||| ||||   |||||||||||| |||| |   |||||||| |||
seq2  TTAGTTTCTTAAC--GTTAACTGCTTTCAATTTAT---AAATTTCA-TGC  44

seq1  AATTTATGACTTTTTTTTTCCTTTCTCTGTTACTTTATTTTTGCCATTAC  100
       | |||||||||||||||| |||  ||||||||||||||||   ||||||
seq2  -AGTTATGACTTTTTTTTT-CTTCTTCTGTTACTTTATTTT--GCATTAC  90

seq1  TTATTTGCTCGGGCG-AGAAAAGAAACCATGGGGAATTTGTCCTTTTTAA  149
      ||| ||||||||||| ||||||| |||||||||||| ||||||||||  |
seq2  TTA-TTGCTCGGGCGAAGAAAAG-AACCATGGGGAAATTGTCCTTTT--A  136

seq1  TTCCAACTTC-AAAATAACCCCTCTTAGATGCAAGAAGTGGAGAGCACAT  198
      |||||||||| ||||||||||||| |||||||||||||||||||||||||
seq2  TTCCAACTTCAAAAATAACCCCTC-TAGATGCAAGAAGTGGAGAGCACAT  185

seq1  TGCTCAGGAGAATACTTAATGATTTGAGGCCTCCACTGGGTCCTTCCTTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGGAGAATACTTAATGATTTGAGGCCTCCACTGGGTCCTTCCTTT  235

seq1  CCTGCAGTGTACGCGGATCATAAGATTCTGCCTATTCTTATTATCTGTCG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGTGTACGCGGATCATAAGATTCTGCCTATTCTTATTATCTGTCG  285

seq1  CATGCAATGGCCTTACTTATTATTATATGTGATATTTCTTTTTGCTTCTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAATGGCCTTACTTATTATTATATGTGATATTTCTTTTTGCTTCTG  335

seq1  TGACCCACAGAAAATCCTCATTCACTTCATTTGTTACCCAGTTCAACTTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCACAGAAAATCCTCATTCACTTCATTTGTTACCCAGTTCAACTTA  385

seq1  ATCAACCTTAAGACCCTGAAACATCTAATTTTTGAGAGAGTGCACAGGTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACCTTAAGACCCTGAAACATCTAATTTTTGAGAGAGTGCACAGGTA  435

seq1  GAATTAGATGCTTCCCTTTACGGCAAATATGATGATTCTTTGTGTTTGCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAGATGCTTCCCTTTACGGCAAATATGATGATTCTTTGTGTTTGCA  485

seq1  AATACAATGAATGTTAATGAACTCAAATAAAGGAGCAGAGAAGGGCCTCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAATGAATGTTAATGAACTCAAATAAAGGAGCAGAGAAGGGCCTCT  535

seq1  TTCCTGTAGATGAGAATAAAGCCCTGTTAAGAAGTGACTCTTCTTCCCTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTAGATGAGAATAAAGCCCTGTTAAGAAGTGACTCTTCTTCCCTC  585

seq1  TTTTCTTTCGTGTGTGTTTGTGTATGTGCATGTAAATTCCTTAGCATATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCGTGTGTGTTTGTGTATGTGCATGTAAATTCCTTAGCATATT  635

seq1  GATAGGAAACACAAAAAAATTGTAAATATATAAAGTAATATTATATTTTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGAAACACAAAAAAATTGTAAATATATAAAGTAATATTATATTTTT  685

seq1  ATCTGTTCTTTATTTGTGACTGCAAAGATAAGTGGGAAAGTAGATGTGTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTCTTTATTTGTGACTGCAAAGATAAGTGGGAAAGTAGATGTGTT  735

seq1  CCTTTTTGTATTTTATGCTTTTACCTATAACTTAAGAACAATCATTTTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTGTATTTTATGCTTTTACCTATAACTTAAGAACAATCATTTTTT  785

seq1  TTTCCTTTTTCTTTCCTAATATAGTAGTTAACAAGGATTGGATTTTATGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTTTCTTTCCTAATATAGTAGTTAACAAGGATTGGATTTTATGT  835

seq1  GTGGTTTTTTTTTTTTTTTTTCCTGGGAGTATCCCACTGTCAGTTCTGGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTTTTTTTTTTTTTTTCCTGGGAGTATCCCACTGTCAGTTCTGGA  885

seq1  CACAAGGAAGGAAGGGAGGGCCAATGGCAGTTTTTCTCTTGACTTTGTAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGGAAGGAAGGGAGGGCCAATGGCAGTTTTTCTCTTGACTTTGTAG  935

seq1  TACAGTACAAGAAAAACCAAACCCAAGCCAAGCGTTTATTACTATGTGCC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTACAAGAAAAACCAAACCCAAGCCAAGCGTTTATTACTATGTGCC  985

seq1  CTAAACACAGTTTCAGTTTCATATTGTTTTCCAAAAATGACCATATCATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACACAGTTTCAGTTTCATATTGTTTTCCAAAAATGACCATATCATT  1035

seq1  ACAAAACTTCATATTTCCTGTCCCAATTTTCATACATTGTTCAGAGTGGC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACTTCATATTTCCTGTCCCAATTTTCATACATTGTTCAGAGTGGC  1085

seq1  CTTCATACTAAGACATGGGATTCTCTTCCTGTTGTTCTCCTGTTTGAATT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATACTAAGACATGGGATTCTCTTCCTGTTGTTCTCCTGTTTGAATT  1135

seq1  C  1149
      |
seq2  C  1136

seq1: chr16_70175642_70176830
seq2: B6Ng01-227A13.g_66_1257

seq1  GAATTCCAGGAAGACGTTTGCTTCTAACACAAACAGTGCATCTTTTCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGAAGACGTTTGCTTCTAACACAAACAGTGCATCTTTTCCTT  50

seq1  ATCAGCAAATGGGGGTTCTGCAGCTCAGATGCAGTTTGCCTGTTACATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCAAATGGGGGTTCTGCAGCTCAGATGCAGTTTGCCTGTTACATCT  100

seq1  CCCCAGCCCTGAGCTCAAAAGAAAACAACCTCTCCAGTTATATCCAGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGCCCTGAGCTCAAAAGAAAACAACCTCTCCAGTTATATCCAGGGC  150

seq1  CCAAACCATAAACCCACCGACAGAAAACTGTCTCAATGTGGTGTGGCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCATAAACCCACCGACAGAAAACTGTCTCAATGTGGTGTGGCTCC  200

seq1  TTTAGCCAACCCTCTTGTTTTTCCCCTAGTTGTTTGTGTTTCTCTCTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCCAACCCTCTTGTTTTTCCCCTAGTTGTTTGTGTTTCTCTCTGCT  250

seq1  AACAAAGCTCCTTTAGCCCTTAAGAGGTCGTAAACCTAAGTGGAGAGTCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGCTCCTTTAGCCCTTAAGAGGTCGTAAACCTAAGTGGAGAGTCG  300

seq1  CTGGATTTTCTTGCCAGGGAGTGTTGCCTTCAGCAAGGACAACCCTCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATTTTCTTGCCAGGGAGTGTTGCCTTCAGCAAGGACAACCCTCCAA  350

seq1  ATGGATCTCCTCCTCTCTCCATAGAAATTTCTCACTGTTCTCTCTGGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATCTCCTCCTCTCTCCATAGAAATTTCTCACTGTTCTCTCTGGCTG  400

seq1  TCTTTCCTATGGGGGACAGGGGAAGGTTAATTGGTAGTTTTTTCTTTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTATGGGGGACAGGGGAAGGTTAATTGGTAGTTTTTTCTTTGAA  450

seq1  TATAAATCTATTTAGCGAGTTATTTGATTATTTTGATGTTAGTTTTAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATCTATTTAGCGAGTTATTTGATTATTTTGATGTTAGTTTTAGAA  500

seq1  GGCTAGTTTGCAGAGTGCCCTTTTGTTTTCTTTCTTTTATTTTGAGATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGTTTGCAGAGTGCCCTTTTGTTTTCTTTCTTTTATTTTGAGATTT  550

seq1  ATTTTTAAATGTAGATGCATATAAACCAAGTCCAGGTCTGTTTCTAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAAATGTAGATGCATATAAACCAAGTCCAGGTCTGTTTCTAAATT  600

seq1  ATTTAATCGAGTAGACATATTTCGCCAGGCAGCTTATCCTTGCGGCTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATCGAGTAGACATATTTCGCCAGGCAGCTTATCCTTGCGGCTCAG  650

seq1  TGTGTGTCTGTAAAAACTGGAAAGAAAATAATAAAAATGAAAGATAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTCTGTAAAAACTGGAAAGAAAATAATAAAAATGAAAGATAAAAA  700

seq1  AAAAGCATGGATAAAAATCTCTTGCACAGAAGGAACTCAGATCCAGTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCATGGATAAAAATCTCTTGCACAGAAGGAACTCAGATCCAGTTCT  750

seq1  CAATTTTATGTGAACTATGATACAT-AAGAAAGAGGTTATAAAATACCAA  799
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CAATTTTATGTGAACTATGATACATAAAGAAAGAGGTTATAAAATACCAA  800

seq1  AGATTCAAAG-TTTGTCCTTAAGTTCAGTAAACTCAACTAAACATCAGTT  848
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGATTCAAAGTTTTGTCCTTAAGTTCAGTAAACTCAACTAAACATCAGTT  850

seq1  CCTGGAGTCACCACTCCCTATGTTCGACC-TCCTGTCACTCTTCACAAGC  897
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CCTGGAGTCACCACTCCCTATGTTCGACCTTCCTGTCACTCTTCACAAGC  900

seq1  CTCCTGATGTTTTCTTACACAGCTCTTGTGATAGTCTGAAACG-TGGCTC  946
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTCCTGATGTTTTCTTACACAGCTCTTGTGATAGTCTGAAACGTTGGCTC  950

seq1  TTTAAACTTGTTAATTAA-CCCCCTGTACCCCAAGAAAAAGTAGATTCCA  995
      |||||||||||||||||| ||||||||| |||||||||||||||||| | 
seq2  TTTAAACTTGTTAATTAACCCCCCTGTA-CCCAAGAAAAAGTAGATTTCC  999

seq1  AGAGACAAGGAACCACGTTTGACATTTTCCTTATAACTGAAGCATCTTCT  1045
      |||||||||||  ||||||||||| |||||||||||||||||||||||||
seq2  AGAGACAAGGA--CACGTTTGACA-TTTCCTTATAACTGAAGCATCTTCT  1046

seq1  CCAAAAATGGAGATGGGTAAGAATTTTATAAA-TATTTGTT-CAACAACA  1093
      |  ||||||||||| ||| ||||||||||||| |||||||| || |||||
seq2  C--AAAATGGAGATTGGT-AGAATTTTATAAATTATTTGTTCCACCAACA  1093

seq1  AG-AACAAAAATCCGGAAGTGGGCAAATGT--CAGTGTAGA-AATATTCA  1139
      || ||| |||||| |||||| |||||||||   |||  ||| ||||||| 
seq2  AGAAACTAAAATCTGGAAGT-GGCAAATGTTCAAGTTGAGATAATATTC-  1141

seq1  ACTTCCTAAAACACTAGCTGCTGAGTTTAGAGAACAT--CCATCACGGTT  1187
      |||||||||||||||||||||||| ||||||||||||   ||||||||||
seq2  ACTTCCTAAAACACTAGCTGCTGA-TTTAGAGAACATTCACATCACGGTT  1190

seq1  TG  1189
      ||
seq2  TG  1192