BAC Information

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BAC

Clone NameB6Ng01-228P15
Chromosome16 (Build37)
Map Location 3,858,366 - 3,859,350
singlet/doubletsinglet
Overlap geneZfp174
Upstream geneLOC100042177, LOC100042915, LOC100042188, LOC100042251, LOC100042925, LOC100042270, LOC100042937, LOC100042283, Olfr161, Olfr162-ps1, Olfr163-ps1, LOC100042949, Mefv, EG620395, Zfp263, Olfr15
Downstream geneZfp597, 1200013P24Rik, 1700037C18Rik, Cluap1, LOC664851, Nlrc3, Btbd12, Dnase1, Trap1, Crebbp, EG436332, Adcy9, EG620313, Srl, Tcfap4, Glis2, Magmas, Coro7, Vasn, Dnaja3, Nmral1, Hmox2, 5730403B10Rik, 4930562C15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228P15.bB6Ng01-228P15.g
ACCGA042248GA042249
length255995
definitionB6Ng01-228P15.b B6Ng01-228P15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atcatgttttggaggcagagagagcatgtgagatctcaggtggagtggcc
attggccgcttctctgactgagcctggggtagcagtagaaagattagaaa
tgtaactaagctgagggcagatttagaggtgttcagctgggagtgaaggt
gagggcacattagctgcaggaggcttagaagtgtctggccattgagacca
ttattaaaaataagtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgt
gaattctttaaatattctgggatgaagtccttatgatgaagtccttgaaa
acagtttctcccattctttggaaatacattcttgtgtaattgttttgttt
ttgcagtgagggttgatacaatctccagcataactcaggctagcctcaaa
cttgcaatcctcctgtcctaaccaggatgggatgacagatgtacacgcgt
gcccagcggtacatatctgtaatgaaaacagctgttacttgtcaaaatac
aaggaaccaaattctctgtttctaaattgccagtgtaaagtagcctgaca
tccctgtgatttaatgaaattaaggacccttggagcacaatttctatcat
tcctccaagcctgttgggtcacatcacccacagacttccctgtgccagtc
atgcatggcttgtggttcctaaggaaaatttaaatatctattaaaatagt
tctattagtctttggaataaacattttcccactgaaataaagatggtatt
gattacttcataagcaacagatgttggtaagtacttgacatacaagactt
ttttccaattatggggactgaactcatctcatgcagcagacttgagagac
tatttttctattgttattactattttaggaagaaaacccccacaaatgtt
cagaatccacatactctagaccacatcacatagccagacagacaattaag
agcagatctgagttccaggttgttgtttcttagtttactaactgggtctt
tggttggtatgggttgatgggatttcactgtgttgcctaggattggcctc
aaattcttggactcaggcagttcctcctgccccagcctcctgagtttcta
ggacaacaaaacacatgacacaattactgttttatttttttcatggaatt
cctgtcttagttaatggttctattactgtaaggagataccgtgaccaagg
cacatttcaataaagaaaatggttaaattggggggtttacttata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_3858366_3859350
seq2: B6Ng01-228P15.g_69_1061

seq1  GAATTCTTTAAATATTCTGGGATGAAGTCCTTATGATGAAGTCCTTGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAATATTCTGGGATGAAGTCCTTATGATGAAGTCCTTGAAA  50

seq1  ACAGTTTCTCCCATTCTTTGGAAATACATTCTTGTGTAATTGTTTTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTCTCCCATTCTTTGGAAATACATTCTTGTGTAATTGTTTTGTTT  100

seq1  TTGCAGTGAGGGTTGATACAATCTCCAGCATAACTCAGGCTAGCCTCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGTGAGGGTTGATACAATCTCCAGCATAACTCAGGCTAGCCTCAAA  150

seq1  CTTGCAATCCTCCTGTCCTAACCAGGATGGGATGACAGATGTACACGCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAATCCTCCTGTCCTAACCAGGATGGGATGACAGATGTACACGCGT  200

seq1  GCCCAGCGGTACATATCTGTAATGAAAACAGCTGTTACTTGTCAAAATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGCGGTACATATCTGTAATGAAAACAGCTGTTACTTGTCAAAATAC  250

seq1  AAGGAACCAAATTCTCTGTTTCTAAATTGCCAGTGTAAAGTAGCCTGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACCAAATTCTCTGTTTCTAAATTGCCAGTGTAAAGTAGCCTGACA  300

seq1  TCCCTGTGATTTAATGAAATTAAGGACCCTTGGAGCACAATTTCTATCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTGATTTAATGAAATTAAGGACCCTTGGAGCACAATTTCTATCAT  350

seq1  TCCTCCAAGCCTGTTGGGTCACATCACCCACAGACTTCCCTGTGCCAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCAAGCCTGTTGGGTCACATCACCCACAGACTTCCCTGTGCCAGTC  400

seq1  ATGCATGGCTTGTGGTTCCTAAGGAAAATTTAAATATCTATTAAAATAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGGCTTGTGGTTCCTAAGGAAAATTTAAATATCTATTAAAATAGT  450

seq1  TCTATTAGTCTTTGGAATAAACATTTTCCCACTGAAATAAAGATGGTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTAGTCTTTGGAATAAACATTTTCCCACTGAAATAAAGATGGTATT  500

seq1  GATTACTTCATAAGCAACAGATGTTGGTAAGTACTTGACATACAAGACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACTTCATAAGCAACAGATGTTGGTAAGTACTTGACATACAAGACTT  550

seq1  TTTTCCAATTATGGGGACTGAACTCATCTCATGCAGCAGACTTGAGAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAATTATGGGGACTGAACTCATCTCATGCAGCAGACTTGAGAGAC  600

seq1  TATTTTTCTATTGTTATTACTATTTTAGGAAGAAAACCCCCACAAATGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCTATTGTTATTACTATTTTAGGAAGAAAACCCCCACAAATGTT  650

seq1  CAGAATCCACATACTCTAGACCACATCACATAGCCAGACAGACAATTAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATCCACATACTCTAGACCACATCACATAGCCAGACAGACAATTAAG  700

seq1  AGCAGATCTGAGTTCCAGGTTGTTGTTTCTTAGTTTACTAACTGGGTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGATCTGAGTTCCAGGTTGTTGTTTCTTAGTTTACTAACTGGGTCTT  750

seq1  TGGTTGGTATGGGTTGATGGGATTTCACTGTGTTGCCTAGGA-TGGCCTC  799
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGGTTGGTATGGGTTGATGGGATTTCACTGTGTTGCCTAGGATTGGCCTC  800

seq1  AAATTCTTGGACTCAGGCAG-TCCTCCTGCCCCAGCCTCCTGAGTTTCTA  848
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAATTCTTGGACTCAGGCAGTTCCTCCTGCCCCAGCCTCCTGAGTTTCTA  850

seq1  GGACAACAAAACACATGACACAATTACTGTTTTATTTTTTTCATGG-ATT  897
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGACAACAAAACACATGACACAATTACTGTTTTATTTTTTTCATGGAATT  900

seq1  TCTGTCTTAGTT-ATTGTTCTATTACTGTAAGGAGATACCGTGACCAAGG  946
       ||||||||||| || ||||||||||||||||||||||||||||||||||
seq2  CCTGTCTTAGTTAATGGTTCTATTACTGTAAGGAGATACCGTGACCAAGG  950

seq1  CA-ATTTCAA-AAAGAAAATGTTTAA--TTGGGGGTTTACTTA  985
      || ||||||| |||||||||| ||||  | |||||||||||||
seq2  CACATTTCAATAAAGAAAATGGTTAAATTGGGGGGTTTACTTA  993