BAC Information

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BAC

Clone NameB6Ng01-232P14
Chromosome16 (Build37)
Map Location 64,344,852 - 64,346,017
singlet/doubletsinglet
Overlap genenone
Upstream geneEpha3, LOC100043540
Downstream geneCkt2, 4930453N24Rik, Zfp654, LOC433036, Cggbp1, LOC668242, LOC100043815, LOC677448, Htr1f, LOC668247, LOC672931
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232P14.bB6Ng01-232P14.g
ACCGA045171GA045172
length1,1791,131
definitionB6Ng01-232P14.b B6Ng01-232P14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctaaaagtttcatccattgtattttgaatacattcactcacca
actcctcccataaccaccttctctacccttacgatcttcccactgaactt
ggagatttcttctccaatcaagtttatcaaatccaggttatgttgctagg
caagtcttctaagtggagtctggactttggtagacctcccaagggtaagt
gatttccaagagaaagatcatggacattgctagtcattggtagaggtcac
agcctttacaatggtcattcagagctaagtagggatctttcaacctttct
gcctcaacctctctctctctctctctctctctctctctatatatatatat
atatatatatatatatatatatatataagcacgtgcatttgcatgtgcat
atgtatatccatatgtttgtatcagggagagttggagacaataggaagag
ttggaagttagaaagggtcaatgaacacttactcaaatatgaatttcccc
aaaattaaaaattcaaacaagatataaccaaaatgctcatttagaaattt
acacgaataatgataggagtagctagcattcctgagtgttttgcatgcta
atttacatgccatttctcagttagatgttataaaaacctattgtttagtc
cagattgcaccaaaaagattgctgatgaaacacacatggaaagtgtcact
gcagataatatcagtagttttatctatctatataagtacatacatatagc
tatatgtgtgtctattttaaaatattttttattagatattttctttattt
acgtttcaaatgttatcccctttccaagtttctcctccgaaaatccccta
tcccctccccctccaagtaaagaattatttctgatattagaatctatttc
tatgtgacttttacagaaaatatgtttttccctgctgccttcttctgttt
taattagggggaaaaaaagcacaggacttttggggaacttttctaaagag
acagacaaatcaaatgtggtggagttctttaaacattattggtgttcaaa
tattttataggtttgcgagggagttctgacaaggcaggaaagggagcaat
tgagataaatggtgggggacttggaccttccgtggggactgaaaggtctg
ggagctgttatactaggtctggtctacag
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccccgagat
tccaccacctcacaccagtcagaatggctaagatcaaaaattcaggtgat
agcagatgctggcaaggatgtggagaaagaggaacactccttcattgttg
gtgggattgcaagcttgtacaaccactctggaaatcagtctggcagttcc
tcagaaaattgggcatactactaccggaggatcccgcaatacctctcctg
ggcatatatccagaagatgttccaaccggtaagaaggacacatgctctac
tatgttcatagcagccttatttataatagccagaagctggaaagaaccca
gatgcccctcaacagaggaatggatacagaaaatgtggtacatttacaca
atggaccactactcagctattaaaaagaatgaatttatgaaattcctggg
caaatggatggacctggagggtatcatcctgagtgaggtaacacaatcac
aaaggaactcgcacaatatgtactcactgataagtggatattagcccaga
aacttaggatacacaaaatataagatataatttgctaaacgcatgaaact
caagaagaacgaagaccaaagtgtggacactttgccccttcctagaaatg
ggaacaaaacacccatggaaggagttacagagacaaaatttggagctgtg
aggaaaggatggaccatctactgattgccatatccagggatccatcccat
aatcagcttccaaaggcttacaccattgcatacactagcaagattttgct
gtaaggacccagatatagctgtctcttgtgagactatgcccgggggctta
gtaaacacagaagtgggatgctcacagtcagctattggaatggatcacag
agctctcattggaagaagctagaagaaagcacccaaggagctaaagggaa
ctgcaccctataggttgaacacaatatgaactaaccagtactcgggagtt
cttgtcttagcctgcatatgtattcaaggatgcctagtgggtccatcacc
tgccaaggaggagctcattgaacttgcaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_64344852_64346017
seq2: B6Ng01-232P14.b_45_1223 (reverse)

seq1  CTGTAGACAGGGAACCTAG-ATAACAGCCTTCAGACCCTTCCAGTCCCCA  49
      ||||||||  |  |||||| ||||||||   |||| |||| |||||||||
seq2  CTGTAGACCAG--ACCTAGTATAACAGCTCCCAGA-CCTTTCAGTCCCCA  47

seq1  -GGAAG--TCAAGTCCCCAACCATT--ACTCAAATGCT-CCTTTCTTGCC  93
       |||||   ||||||||| ||||||   ||||| |||| |||||| ||||
seq2  CGGAAGGTCCAAGTCCCCCACCATTTATCTCAATTGCTCCCTTTCCTGCC  97

seq1  TTGTCAGAACTTCCTCTGCAAACCTAT-AAATATTTGAACA-CAATAATT  141
      ||||||||||| |||| |||||||||| ||||||||||||| |||||| |
seq2  TTGTCAGAACTCCCTC-GCAAACCTATAAAATATTTGAACACCAATAA-T  145

seq1  GTTTAAAG-ACT-CACAACATTTGATTTGTCTGTCTCTTTAG-AAAGTT-  187
      |||||||| ||| ||| ||||||||||||||||||||||||| |||||| 
seq2  GTTTAAAGAACTCCACCACATTTGATTTGTCTGTCTCTTTAGAAAAGTTC  195

seq1  CCCAAAAGTCCTGTGCTTTTTTT-CCCCTAAATTAAACAGAAG-AGGCAG  235
      ||||||||||||||||||||||| ||||||| | ||||||||| ||||||
seq2  CCCAAAAGTCCTGTGCTTTTTTTCCCCCTAATTAAAACAGAAGAAGGCAG  245

seq1  CAGGG-AAAACATA-TTTCTGTTAAAGTCACATAGAAATAGATTCTAATA  283
      ||||| |||||||| ||||||| |||||||||||||||||||||||||||
seq2  CAGGGAAAAACATATTTTCTGTAAAAGTCACATAGAAATAGATTCTAATA  295

seq1  TCAGAAAT-ATTCTTTACTTGGGAGGGGGAGGGGATAGGGGATTTTCGGA  332
      |||||||| ||||||||||| |||||||||||||||||||||||||||||
seq2  TCAGAAATAATTCTTTACTT-GGAGGGGGAGGGGATAGGGGATTTTCGGA  344

seq1  GGAGAAACTTGGAAAGGGGATAACATTTGAAACGTAAATAAAGAAAATAT  382
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAACTTGGAAAGGGGATAACATTTGAAACGTAAATAAAGAAAATAT  394

seq1  CTAAT-AAAAATATTTTAAAATAGACACACATATAGCTATATGTATGTAC  431
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAAAAAATATTTTAAAATAGACACACATATAGCTATATGTATGTAC  444

seq1  TTATATAGATAGATAAAACTACTGATATTATCTGCAGTGACACTTTCCAT  481
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAGATAGATAAAACTACTGATATTATCTGCAGTGACACTTTCCAT  494

seq1  GTGTGTTTCATCAGCAATCTTTTTGGTGCAATCTGGACTAAACAATAGGT  531
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTTCATCAGCAATCTTTTTGGTGCAATCTGGACTAAACAATAGGT  544

seq1  TTTTATAACATCTAACTGAGAAATGGCATGTAAATTAGCATGCAAAACAC  581
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAACATCTAACTGAGAAATGGCATGTAAATTAGCATGCAAAACAC  594

seq1  TCAGGAATGCTAGCTACTCCTATCATTATTCGTGTAAATTTCTAAATGAG  631
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAATGCTAGCTACTCCTATCATTATTCGTGTAAATTTCTAAATGAG  644

seq1  CATTTTGGTTATATCTTGTTTGAATTTTTAATTTTGGGGAAATTCATATT  681
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGGTTATATCTTGTTTGAATTTTTAATTTTGGGGAAATTCATATT  694

seq1  TGAGTAAGTGTTCATTGACCCTTTCTAACTTCCAACTCTTCCTATTGTCT  731
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAAGTGTTCATTGACCCTTTCTAACTTCCAACTCTTCCTATTGTCT  744

seq1  CCAACTCTCCCTGATACAAACATATGGATATACATATGCACATGCAAATG  781
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTCTCCCTGATACAAACATATGGATATACATATGCACATGCAAATG  794

seq1  CACGTGCTTATATATATATATATATATATATATATATATATATATATATA  831
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CACGTGCTTATATATATATATATATATATATATATATATATATATATAGA  844

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGGTTGAGGCAGAAAGGTTGAAAGA  881
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGGTTGAGGCAGAAAGGTTGAAAGA  894

seq1  TCCCTACTTAGCTCTGAATGACCATTGTAAAGGCTGTGACCTCTACCAAT  931
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTACTTAGCTCTGAATGACCATTGTAAAGGCTGTGACCTCTACCAAT  944

seq1  GACTAGCAATGTCCATGATCTTTCTCTTGGAAATCACTTACCCTTGGGAG  981
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGCAATGTCCATGATCTTTCTCTTGGAAATCACTTACCCTTGGGAG  994

seq1  GTCTACCAAAGTCCAGACTCCACTTAGAAGACTTGCCTAGCAACATAACC  1031
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACCAAAGTCCAGACTCCACTTAGAAGACTTGCCTAGCAACATAACC  1044

seq1  TGGATTTGATAAACTTGATTGGAGAAGAAATCTCCAAGTTCAGTGGGAAG  1081
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTGATAAACTTGATTGGAGAAGAAATCTCCAAGTTCAGTGGGAAG  1094

seq1  ATCGTAAGGGTAGAGAAGGTGGTTATGGGAGGAGTTGGTGAGTGAATGTA  1131
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTAAGGGTAGAGAAGGTGGTTATGGGAGGAGTTGGTGAGTGAATGTA  1144

seq1  TTCAAAATACAATGGATGAAACTTTTAGAGAATTC  1166
      |||||||||||||||||||||||||||||||||||
seq2  TTCAAAATACAATGGATGAAACTTTTAGAGAATTC  1179