BAC Information

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BAC

Clone NameB6Ng01-234C18
Chromosome16 (Build37)
Map Location 68,136,220 - 68,238,531
singlet/doubletdoublet
Overlap genenone
Upstream geneCadm2, 9330155M09Rik
Downstream geneEG626609
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234C18.bB6Ng01-234C18.g
ACCGA046010GA046011
length760958
definitionB6Ng01-234C18.b B6Ng01-234C18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,237,773 - 68,238,531)(68,136,220 - 68,137,151)
sequence
gaattctgcactaacagattaaaaaatcaaatccaagtatttgagatatt
gctacaaagataatgaatggatattttggtaatctctctctctctctctc
tctctctctctctctctctctctctctctcttatgtgtgtccatgtacag
atttattctccctctatattgaatgatcttggtattatatattatacaag
ctttacagatgacaaaatgaatttttaatttttttatataagagcatctg
atctttgtggagttttttttcttttcttttcttttttttttttttttgaa
aaattcagcttaagttttgcttttagtgacttaccaataaaaaaattaaa
agtatatagaataatatgcaactttaatctgtatttatctcttgggttgt
atctgtgcaaatacgtgcctaaatatgttttcgaactgggcctattgtgc
ttcatacctggagaattttggggggattttttttatgtaaatattttatc
atttagcagagatctttgtataaaaatcttcatttttttatatttgggga
acatcatactatacaacctgtgcaccactgggcccaggcatgaagcaagt
ctgatatgtaccttgacaggtgccacatgacttgaataaggcagagcaat
ctctgagaccactctctgtgaggatctgagacatccacaaacctctttga
tgagcacataagtgatggctactatgaaggataaggagaaacagaagatg
gggcacaata
gaattcagaagaaaatgtaattagtaaaactctaatgagagcatattaat
ttataggattttaggacaaacttctcaaatggtgttgtctcattagatca
ctgttaattcgatatcaaaagttaagattgttaagtagagatgatgcaaa
ctttggaaattaaataattcatgaccttacaggacaattcatatagttat
ttttcaataaataaatatgatctagaaacttcataggctacttgctttat
gtatacaacaaatttaatataatttatattactttctattcattggtatt
ttatataggtaatcattctagttattatccctaagcctaggtttcaaagg
ttacttgtgaaactccagtatgtatgggaaacccaagtaaaacatatttg
tgatataaaacaaatgtatacaatgttacgtttttgtagaggaattttaa
tccattataatgacttctctggcaaaggatcacacacaaaaacctagggt
tgtatgatcctacatctttaatgacactgtctgaaacacagacatgccct
tagtacatattttaatctcaaacaatgaaagaaaggttattttatagaag
gaagcagtcatgtttgaaagtgacattttaagacatttcattgaaaagca
gacaaagtaataaatcagagaaagaccaggatggttcatagataggatag
tccctgttcttaagaacagaacaataaagaaagccaactcaagagagcag
tgcagagaaagagggaaagatacatagatagatgatagttggatagatag
atagatagatagatagatagatagatagatagatagacagacagatagat
gatagatagatagatagatagatagatagatagatagatagatagatcca
gaccacagggagaaacagagacagagacaagagaggaggaaattttactg
ggatcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_68237773_68238531
seq2: B6Ng01-234C18.b_31_790 (reverse)

seq1  TATTGTGCCCCATCTTCTGTTTTTCCTTCTCCTTCAT-CTTGCCATCACT  49
      |||||||||||||||||||||| ||||| ||||||||  | |||||||||
seq2  TATTGTGCCCCATCTTCTGTTTCTCCTTATCCTTCATAGTAGCCATCACT  50

seq1  TATTTGCTCATC-AAGTGGTTTGTGGATGTCTCAGATCATCACAGA-AGT  97
      ||| |||||||| ||| ||||||||||||||||||||| ||||||| |||
seq2  TATGTGCTCATCAAAGAGGTTTGTGGATGTCTCAGATCCTCACAGAGAGT  100

seq1  GGTCTCAG-GATTGCTCTGCCCTATCCAAGTCATGTGGCACCCGTCAAGG  146
      |||||||| |||||||||||| ||| |||||||||||||||| |||||||
seq2  GGTCTCAGAGATTGCTCTGCCTTATTCAAGTCATGTGGCACCTGTCAAGG  150

seq1  TTCATCTCAGACTTGCTTCCTGCCTGGGCCCTGTGGTGCTAAGGTTGTAT  196
      | ||| ||||||||||||| ||||||||||| |||||||  |||||||||
seq2  TACATATCAGACTTGCTTCATGCCTGGGCCCAGTGGTGCACAGGTTGTAT  200

seq1  AGTATGATGTGTACACAAATCTGAAAAAAAATGAAGATTTTTATACAAAG  246
      |||||||||| | | ||||| |  ||||||||||||||||||||||||||
seq2  AGTATGATGT-TCCCCAAATAT--AAAAAAATGAAGATTTTTATACAAAG  247

seq1  ATCTCTGCTAAATGATAAAATATTTACATAGAAAAAATCCCCCCAAAATT  296
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATCTCTGCTAAATGATAAAATATTTACATAAAAAAAATCCCCCCAAAATT  297

seq1  CTCAAGGTATGAAGCACAATAGGACCAGTTTGAAAACATATTTAGGCACG  346
      ||| ||||||||||||||||||| |||||| |||||||||||||||||||
seq2  CTCCAGGTATGAAGCACAATAGGCCCAGTTCGAAAACATATTTAGGCACG  347

seq1  TATTTGCACAGATACAACACAAGAGATAAATACAGATTAAAGTTGCATAT  396
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TATTTGCACAGATACAACCCAAGAGATAAATACAGATTAAAGTTGCATAT  397

seq1  TATTCTATATACTTTTAATTTTTTTACTGGTAAGTCACTAAAAGCAAAAC  446
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TATTCTATATACTTTTAATTTTTTTATTGGTAAGTCACTAAAAGCAAAAC  447

seq1  TTAAGCTGAATTTTTCAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCTGAATTTTTCAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAAA  497

seq1  ACTCCACAAAGATCAGATGCTCTTATTTGCTATAATTTAAAATTCATTTT  546
      |||||||||||||||||||||||||| |   | |||| ||||||||||||
seq2  ACTCCACAAAGATCAGATGCTCTTATATAAAAAAATTAAAAATTCATTTT  547

seq1  GTCATCTGTAAAGCTTCTATAATATATAATACCAAGATCATTCAATATAG  596
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTCATCTGTAAAGCTTGTATAATATATAATACCAAGATCATTCAATATAG  597

seq1  AGGGAGAATAAATCTGTACATGGACACACATAGGAGAGAGAGAGAGAGAG  646
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGGGAGAATAAATCTGTACATGGACACACATAAGAGAGAGAGAGAGAGAG  647

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTACCAAAATATCCATTCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTACCAAAATATCCATTCA  697

seq1  TTATCTTTGTAGCAATATCTCAAATACTTGGATTTGATTTTTTAATCTGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTTGTAGCAATATCTCAAATACTTGGATTTGATTTTTTAATCTGT  747

seq1  TAGTGCAGAATTC  759
      |||||||||||||
seq2  TAGTGCAGAATTC  760

seq1: chr16_68136220_68137151
seq2: B6Ng01-234C18.g_67_995

seq1  GAATTCAGAAGAAAATGTAATTAGTAAAACTCTAATGAGAGCATATTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAGAAAATGTAATTAGTAAAACTCTAATGAGAGCATATTAAT  50

seq1  TTATAGGATTTTAGGACAAACTTCTCAAATGGTGTTGTCTCATTAGATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGGATTTTAGGACAAACTTCTCAAATGGTGTTGTCTCATTAGATCA  100

seq1  CTGTTAATTCGATATCAAAAGTTAAGATTGTTAAGTAGAGATGATGCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAATTCGATATCAAAAGTTAAGATTGTTAAGTAGAGATGATGCAAA  150

seq1  CTTTGGAAATTAAATAATTCATGACCTTACAGGACAATTCATATAGTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAAATTAAATAATTCATGACCTTACAGGACAATTCATATAGTTAT  200

seq1  TTTTCAATAAATAAATATGATCTAGAAACTTCATAGGCTACTTGCTTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAATAAATAAATATGATCTAGAAACTTCATAGGCTACTTGCTTTAT  250

seq1  GTATACAACAAATTTAATATAATTTATATTACTTTCTATTCATTGGTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACAACAAATTTAATATAATTTATATTACTTTCTATTCATTGGTATT  300

seq1  TTATATAGGTAATCATTCTAGTTATTATCCCTAAGCCTAGGTTTCAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAGGTAATCATTCTAGTTATTATCCCTAAGCCTAGGTTTCAAAGG  350

seq1  TTACTTGTGAAACTCCAGTATGTATGGGAAACCCAAGTAAAACATATTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTGTGAAACTCCAGTATGTATGGGAAACCCAAGTAAAACATATTTG  400

seq1  TGATATAAAACAAATGTATACAATGTTACGTTTTTGTAGAGGAATTTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATAAAACAAATGTATACAATGTTACGTTTTTGTAGAGGAATTTTAA  450

seq1  TCCATTATAATGACTTCTCTGGCAAAGGATCACACACAAAAACCTAGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTATAATGACTTCTCTGGCAAAGGATCACACACAAAAACCTAGGGT  500

seq1  TGTATGATCCTACATCTTTAATGACACTGTCTGAAACACAGACATGCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGATCCTACATCTTTAATGACACTGTCTGAAACACAGACATGCCCT  550

seq1  TAGTACATATTTTAATCTCAAACAATGAAAGAAAGGTTATTTTATAGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACATATTTTAATCTCAAACAATGAAAGAAAGGTTATTTTATAGAAG  600

seq1  GAAGCAGTCATGTTTGAAAGTGACATTTTAAGACATTTCATTGAAAAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGTCATGTTTGAAAGTGACATTTTAAGACATTTCATTGAAAAGCA  650

seq1  GACAAAGTAATAAATCAGAGAAAGACCAGGATGGTTCATAGATAGGATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGTAATAAATCAGAGAAAGACCAGGATGGTTCATAGATAGGATAG  700

seq1  TCCCTGTTCTTAAGAACAGAACAATAAAGAAAGCCAACTCAAGAGAGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTTCTTAAGAACAGAACAATAAAGAAAGCCAACTCAAGAGAGCAG  750

seq1  TGCAGAGAAAGAGGGAAAGATACATAGATAGATGATAGTTGGATAGATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGAAAGAGGGAAAGATACATAGATAGATGATAGTTGGATAGATAG  800

seq1  ATAGATAGATAGATAGATAGATAGATAGATAGATAGACAGACAGATAGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAGATAGATAGATAGATAGATAGATAGATAGACAGACAGATAGAT  850

seq1  GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATACA  900
      |||||||||||||||||||||||||||||||||||||||||||||||   
seq2  GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT--C  898

seq1  CAGACACACAGGGAGAAACAGAGACAGAGACA  932
      ||||| ||||||||||||||||||||||||||
seq2  CAGAC-CACAGGGAGAAACAGAGACAGAGACA  929