BAC Information

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BAC

Clone NameB6Ng01-234C19
Chromosome16 (Build37)
Map Location 83,302,599 - 83,303,681
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665260
Downstream geneEG545172, LOC100039572, EG621729, LOC640489
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234C19.bB6Ng01-234C19.g
ACCGA046012GA046013
length1,0811,158
definitionB6Ng01-234C19.b B6Ng01-234C19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaaccaaccaaagtgccaaattatacacaactgagtacccact
cttagtatatgggaggtatatagcacgcgagtgtgattattaaacaaagc
aactttgctgatgtgttctccgagtcatcttcctgcttagagtaccaaaa
tacacttacttgttagttatatctttaaaatgccctggacttgtctattt
ttctttttcctcatcctaaagtaattcttggagaatttcatacaatgtaa
tttgatcatattcatcctttagccaccactcccagatcatgcaactttta
cacagttttaagcccgcacgtacagtttatgattcccttttatttctaat
tgaattgtctttcattgtagcttggtcaatttgtgcctgggccaccatct
taaaattgactgactccctccctgaagctatcaattattaataatttctt
acatattggtgggaattaattccaacctctgctgtgcatgttggcatttg
tctgtcttaaacttctataggacttaaacacaccatcacagttcttaaag
tccagtagtgggtctttctactaatcaacagttataaaaaagaaagagag
agaaagaaaggaagaaaagaaaagaaaagaaaagaaaagaaaagaaaaga
aagagaagaaaaaggaagaaaaaaagaaaagaaagttctgatgaaatttg
agaaatgaaataatctataggtaacatgataaggtaagcttattaggaca
ttagaacttagcttatttcgatgtctatttagcaaagaaacagtagtagg
catttccccacagtctaatacctgtctagatttgtttgccagaatatatg
ggtcagctattaagtttccacttgtagaacatgtcttatgctcacagtca
gctaatggatggatcacagggctcccaatggaggagctagagaaagtagc
caaggagccaaagggatctgcaccctatagtggaacaacattatgaacta
accagtaccctggagctcttgactctagctgcatataatatcaaaaaaat
gcctagtcgccatcactggaagagaaggccc

gaattctcacctgaggaatacctaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcactcctgtcagaatggctaagataaaaaattcaggtgacagc
agatgttggtgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttctacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtattactggaggatcccgcaatacctatcctgggc
atatatccagaagatgtcccaaccagtaagaaggacacatggtccactat
gttcatagccgccctatttataatagccagaagctgaaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactgagctattaaaaaatgaatttatgaaattcctaggtaaat
ggatggacctggagggcatcatcctgagtgaggtagcccaatcacaaagg
aattcacacaatatgtactcactgataagtggatattagcccagaaactt
aggatacccaagatataagatacaatttgctaaacgcatgaaattcaaga
agaacgaagaccaaagtgtggacactttgccccttcttagaaatgggaac
aaaacacccatggaaggagttacagagacaaaatttggaggtgtgacgaa
aggattgactatctagtgattgccatatgcagggatccatcccataatca
gcttccaaacgctgacaccattgcatatactagcaagattttgttgaaag
gacccaaatatagctgtctattgtgatactatgctgggacctagcaaaca
ctgaagtggatgatcacagtcagctattcgatgggtcacacggcccccaa
tggaggagctatagaaatgacccaaggagctaagggaactgcaacctata
gtgacaacaatatgaactaaccagtacccgagctcttactctagctgcaa
tatgttatcaaagatgcctagtttgccatcactgcaagagaagccatgac
ttgcaagcttatatgccagtcagtaatcccaggccaatagggggatttgt
gtgtagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_83302599_83303681
seq2: B6Ng01-234C19.b_46_1126

seq1  GAATTCAAAACCAACCAAAGTGCCAAATTATACACAACTGAGTACCCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAACCAACCAAAGTGCCAAATTATACACAACTGAGTACCCACT  50

seq1  CTTAGTATATGGGAGGTATATAGCACGCGAGTGTGATTATTAAACAAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTATATGGGAGGTATATAGCACGCGAGTGTGATTATTAAACAAAGC  100

seq1  AACTTTGCTGATGTGTTCTCCGAGTCATCTTCCTGCTTAGAGTACCAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGCTGATGTGTTCTCCGAGTCATCTTCCTGCTTAGAGTACCAAAA  150

seq1  TACACTTACTTGTTAGTTATATCTTTAAAATGCCCTGGACTTGTCTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTTACTTGTTAGTTATATCTTTAAAATGCCCTGGACTTGTCTATTT  200

seq1  TTCTTTTTCCTCATCCTAAAGTAATTCTTGGAGAATTTCATACAATGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTCCTCATCCTAAAGTAATTCTTGGAGAATTTCATACAATGTAA  250

seq1  TTTGATCATATTCATCCTTTAGCCACCACTCCCAGATCATGCAACTTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATCATATTCATCCTTTAGCCACCACTCCCAGATCATGCAACTTTTA  300

seq1  CACAGTTTTAAGCCCGCACGTACAGTTTATGATTCCCTTTTATTTCTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTTTAAGCCCGCACGTACAGTTTATGATTCCCTTTTATTTCTAAT  350

seq1  TGAATTGTCTTTCATTGTAGCTTGGTCAATTTGTGCCTGGGCCACCATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGTCTTTCATTGTAGCTTGGTCAATTTGTGCCTGGGCCACCATCT  400

seq1  TAAAATTGACTGACTCCCTCCCTGAAGCTATCAATTATTAATAATTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTGACTGACTCCCTCCCTGAAGCTATCAATTATTAATAATTTCTT  450

seq1  ACATATTGGTGGGAATTAATTCCAACCTCTGCTGTGCATGTTGGCATTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTGGTGGGAATTAATTCCAACCTCTGCTGTGCATGTTGGCATTTG  500

seq1  TCTGTCTTAAACTTCTATAGGACTTAAACACACCATCACAGTTCTTAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTTAAACTTCTATAGGACTTAAACACACCATCACAGTTCTTAAAG  550

seq1  TCCAGTAGTGGGTCTTTCTACTAATCAACAGTTATAAAAAAGAAAGAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTAGTGGGTCTTTCTACTAATCAACAGTTATAAAAAAGAAAGAGAG  600

seq1  AGAAAGAAAGGAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAGGAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGA  650

seq1  AAGAGAAGAAAAAGGAAGAAAAAAAGAAAAGAAAGTTCTGATGAAATTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAGAAAAAGGAAGAAAAAAAGAAAAGAAAGTTCTGATGAAATTTG  700

seq1  AGAAATGAAATAATCTATAGGTAACATGATAAGGTAAGCTTATTAGGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGAAATAATCTATAGGTAACATGATAAGGTAAGCTTATTAGGACA  750

seq1  TTAGAACTTAGCTTATTTCGATGTCTATTTAGCAAAGAAACAGTAGTAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAACTTAGCTTATTTCGATGTCTATTTAGCAAAGAAACAGTAGTAGG  800

seq1  CATTTCCCCACAGTCTAATACCTGTCTAGATTTGTTTGCCAGAATATATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCCCACAGTCTAATACCTGTCTAGATTTGTTTGCCAGAATATATG  850

seq1  GGTCAGCTATTAAGTTTCCACTTGTAGAACATGTCTTATGCTCACAGTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGCTATTAAGTTTCCACTTGTAGAACATGTCTTATGCTCACAGTCA  900

seq1  GCTAATGGATGGATCACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTAGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATGGATGGATCACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTAGC  950

seq1  CAAGGAGCCAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATGAAC  1000
      ||||||||||||||||||||| |||||||| |||||||||||||||||||
seq2  CAAGGAGCCAAAGGGATCTGC-ACCCTATA-GTGGAACAACATTATGAAC  998

seq1  TAACCAGTACCCTGGAGCTCTTGACTCTAGCTGCATAT-ATATCAAAAGA  1049
      |||||||||||||||||||||||||||||||||||||| ||||||||| |
seq2  TAACCAGTACCCTGGAGCTCTTGACTCTAGCTGCATATAATATCAAAAAA  1048

seq1  TGGCCTAGTCGGCCATCACTGGAAAGAG-AGGCCC  1083
        |||||||| ||||||||||| ||||| ||||||
seq2  ATGCCTAGTC-GCCATCACTGG-AAGAGAAGGCCC  1081


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