BAC Information

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BAC

Clone NameB6Ng01-234O16
Chromosome16 (Build37)
Map Location 23,598,704 - 23,599,800
singlet/doubletsinglet
Overlap genenone
Upstream geneDgkg, LOC666459, Crygs, Tbccd1, Dnajb11, Ahsg, Fetub, Hrg, Kng2, LOC624311, LOC666486, LOC666489, Kng1, LOC666493, Eif4a2, Rfc4, Adipoq, LOC100043541, EG625835, BC106179, St6gal1, Rtp1, Masp1, LOC100043018
Downstream geneRtp4, EG625969, LOC100043023, Sst, Rtp2, Bcl6, EG433009, LOC666580, LOC100043564, 1110054M08Rik, Lpp, A730098P11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234O16.bB6Ng01-234O16.g
ACCGA046534GA046535
length1,1011,228
definitionB6Ng01-234O16.b B6Ng01-234O16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaggctagggttccttcattattcatgatgataagtttgcagtt
ccttcctgacccagaggagtccgctaagctgtagagaagtgctcagattt
ctctgctgccatactctcagggaggtatgcacactctaagacaggacaag
ttggcagcagcaaccaaagcacgagaggcatggggaaatatcaatgggtg
tatttatactgcttccctgagaatcttttcgtgagccaccgagcatatcc
tcggcaggaccacagctctagttagcactgcctttcagccgaagatcagt
gtgaagggaaaggaagtgttgaaactataccaacaaggccagagggccac
agcgttgttatagatggccataacaagaaaccagtggattgaaggaaatg
aagaattaagagattggctttaaaagtccaatggtacattcagtcaaaac
ctataatcttctagtcccatcagacttccttcaggcaatgccaggtgggc
aaagaagacaaggctgatcccagagattcggtcctgctatgaactcctga
gaatcactttttctatcccctcatttttttcagagctgagcgtccctctc
ccttgctggatctctgctctttgaatctgtgtctccttcactctttctca
ccatggtccactcataacatcattggatccctgagctggagccaggctgg
ccattttgtgttctggctctaccatttgctaccacagtgaccttggtcag
gctccgaagcctttctgtgcctcagtttccctatctagacctgagataag
aatattaccatttcacagggctgcttgagaactcagtggttaaatagtta
gcagcactggcatatagaagtatttacgtttttattgctgctgttctatg
gttctttgaagtactataaaaactttgttaaacaccttaggactataaca
tggcaaaattttcaatattgtaaaataaggagaaaaatcatgaatatgta
ggtgatagaaatttataaaatgtctgctacatttaaaagaagactaactt
ttactggacctcgagcaaacttaatagcactgtacaagtcgatttcagac
t
gaattctttataaatagtgcagtgcagaaaacagcattatagaaaacaca
ggtactctcccatgccaccccaatgcaggagagtaagcctggagtaagtg
tggagggaagcaggtcagtgaacaaaggcatgcacacaggatttcaggtc
ttctcccaggcaagggaagacatcagttcggtgggttgaatgagaatggt
tcccagaggctcatttgttcgaatatctggttcccattttgtagcagtat
taagagatgtggccttgttggaggaggtatgtcactgggggtgcacttag
aggtttcaaaggactcttgccaccctccagtttttctttttctacctttt
gcctttgggtggagaggtaagctttcagttattcatgtcactttgggctg
ccatcatgaattctaaccctctgaaaatgaaaggcccaaactaacccccc
tcttttacaatttgccttggtcatgatattttatcacagtaatgcaaaac
tagctaatgcaagtgtgtgtgtgtgtgtgtgtgtgtgatgtgtgtgtgtg
agatagacatattaaactcagcagggaagatggacaaaatgaggctattg
aacattttgatgcaattgaggaaatgctgcaatcatccgtatctctttcg
atggagctgaacctggtccactgtacacaacagatatgcatctagttacc
aaacagtggcaagatggtggtgttagacaagctactccctaaactgaaag
aacaaggttcaagagtactaatcttttagtcaggatgacaagagtattta
gacattttggaaggattatttgcatgtgggagaaattatgagtactgcat
gttggatgaacagacacccccatgatgaagagacaaagacttcatcaatg
tcatacaattgaaccaaaatagccacaaagtttgtattttatgcttaagc
acaccgttgctggtggtctgggcatcaatctggcaacctgctgatgtagt
atttatatgattcagaatggaatccctcaagtttgatctttcagcctatg
gaaccatgtccattaaaattgggacaaaaaggaaggaactggtccgaggt
ggttcgccttattaatacctggaataaccacttggggaagaaaagaataa
gtgaagagccttggtggacgaatgctcactatggtcataaaaggaccccc
gaactgtgcttctttctcgaaagagttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_23598704_23599800
seq2: B6Ng01-234O16.b_44_1144 (reverse)

seq1  AGTCTGAAAT-GAC-TGTACAGTG-TATTAGTTTTGCTCGAGGTCCAGTA  47
      |||||||||| ||| ||||||||| |||||  ||||||||||||||||||
seq2  AGTCTGAAATCGACTTGTACAGTGCTATTAAGTTTGCTCGAGGTCCAGTA  50

seq1  AAAGTTAGTCT--CTTTAAATGTAGGAGACATTTTTATAAAATTCTATCA  95
      |||||||||||   ||||||||||| ||||| ||||||||| ||||||||
seq2  AAAGTTAGTCTTCTTTTAAATGTAGCAGACA-TTTTATAAATTTCTATCA  99

seq1  CCTACATATTCATGATTTTTCTCCTTATTTTACAATATTG-AAATTTTGC  144
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCTACATATTCATGATTTTTCTCCTTATTTTACAATATTGAAAATTTTGC  149

seq1  CATGTTATAGTCCTAAGGTGTTTAACAAAGTTTTTATAGTACTTCAAAGA  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTATAGTCCTAAGGTGTTTAACAAAGTTTTTATAGTACTTCAAAGA  199

seq1  ACCATAGAACAGCAGCAATAAAAACGTAAATACTTCTATATGCCAGTGCT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATAGAACAGCAGCAATAAAAACGTAAATACTTCTATATGCCAGTGCT  249

seq1  GCTAACTATTTTAACCACTGAGTTCTCAAGCAGCCCTGTGAAATGGTAAT  294
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACTA-TTTAACCACTGAGTTCTCAAGCAGCCCTGTGAAATGGTAAT  298

seq1  ATTCTTATCTCAGGTCTAGATAGGGAAACTGAGGCACAGAAAGGCTTCGG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTATCTCAGGTCTAGATAGGGAAACTGAGGCACAGAAAGGCTTCGG  348

seq1  AGCCTGACCAAGGTCACTGTGGTAGCAAATGGTAGAGCCAGAACACAAAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGACCAAGGTCACTGTGGTAGCAAATGGTAGAGCCAGAACACAAAA  398

seq1  TGGCCAGCCTGGCTCCAGCTCAGGGATCCAATGATGTTATGAGTGGACCA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGCCTGGCTCCAGCTCAGGGATCCAATGATGTTATGAGTGGACCA  448

seq1  TGGTGAGAAAGAGTGAAGGAGACACAGATTCAAAGAGCAGAGATCCAGCA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGAAAGAGTGAAGGAGACACAGATTCAAAGAGCAGAGATCCAGCA  498

seq1  AGGGAGAGGGACGCTCAGCTCTGAAAAAAATGAGGGGATAGAAAAAGTGA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGAGGGACGCTCAGCTCTGAAAAAAATGAGGGGATAGAAAAAGTGA  548

seq1  TTCTCAGGAGTTCATAGCAGGACCGAATCTCTGGGATCAGCCTTGTCTTC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGGAGTTCATAGCAGGACCGAATCTCTGGGATCAGCCTTGTCTTC  598

seq1  TTTGCCCACCTGGCATTGCCTGAAGGAAGTCTGATGGGACTAGAAGATTA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCCACCTGGCATTGCCTGAAGGAAGTCTGATGGGACTAGAAGATTA  648

seq1  TAGGTTTTGACTGAATGTACCATTGGACTTTTAAAGCCAATCTCTTAATT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTTGACTGAATGTACCATTGGACTTTTAAAGCCAATCTCTTAATT  698

seq1  CTTCATTTCCTTCAATCCACTGGTTTCTTGTTATGGCCATCTATAACAAC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTTCCTTCAATCCACTGGTTTCTTGTTATGGCCATCTATAACAAC  748

seq1  GCTGTGGCCCTCTGGCCTTGTTGGTATAGTTTCAACACTTCCTTTCCCTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGGCCCTCTGGCCTTGTTGGTATAGTTTCAACACTTCCTTTCCCTT  798

seq1  CACACTGATCTTCGGCTGAAAGGCAGTGCTAACTAGAGCTGTGGTCCTGC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGATCTTCGGCTGAAAGGCAGTGCTAACTAGAGCTGTGGTCCTGC  848

seq1  CGAGGATATGCTCGGTGGCTCACGAAAAGATTCTCAGGGAAGCAGTATAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGATATGCTCGGTGGCTCACGAAAAGATTCTCAGGGAAGCAGTATAA  898

seq1  ATACACCCATTGATATTTCCCCATGCCTCTCGTGCTTTGGTTGCTGCTGC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACCCATTGATATTTCCCCATGCCTCTCGTGCTTTGGTTGCTGCTGC  948

seq1  CAACTTGTCCTGTCTTAGAGTGTGCATACCTCCCTGAGAGTATGGCAGCA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTGTCCTGTCTTAGAGTGTGCATACCTCCCTGAGAGTATGGCAGCA  998

seq1  GAGAAATCTGAGCACTTCTCTACAGCTTAGCGGACTCCTCTGGGTCAGGA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATCTGAGCACTTCTCTACAGCTTAGCGGACTCCTCTGGGTCAGGA  1048

seq1  AGGAACTGCAAACTTATCATCATGAATAATGAAGGAACCCTAGCCTAGAA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTGCAAACTTATCATCATGAATAATGAAGGAACCCTAGCCTAGAA  1098

seq1  TTC  1097
      |||
seq2  TTC  1101