BAC Information

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BAC

Clone NameB6Ng01-235H17
Chromosome16 (Build37)
Map Location 58,922,617 - 58,923,185
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043477, Dcbld2, St3gal6, LOC100043480, Gm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1
Downstream geneOlfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195, Olfr196, Olfr197, Olfr198, Olfr199, Olfr200-ps1, Olfr201, Olfr202, Olfr203, Olfr204, Olfr205, GA_x5J8B7U0478-6-340, Olfr206, Olfr207, Gabrr3, LOC100043803, Mina, BC043118, LOC672884, Arl6, Epha6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-235H17.bB6Ng01-235H17.g
ACCGA046948GA046949
length1,0801,169
definitionB6Ng01-235H17.b B6Ng01-235H17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgggattaaaagtgtgtcccaccatattcacatttcctcttttt
aaaatgcataataatattcaattttatggacagactatatcctgttatac
attcatttaataatggacatttaggcctaaattgaagactttgaataata
tcactatgaatagggggtgcacaaacatcttgtcctaattaggattacta
tttttgtgagaaaatcctgaccaaaagaatattgggtgtcaaagggcata
tttgttttccacttccacatagtagttcatcactaaaggaaatcaaggca
gaaacctggaagtaggagctgatgcagaggccatgaaggggtgctgctta
ctgaattgcttcctctgatttccacagcctgttttctcatagaatccagg
acttccagtctaggcatggtaccacccactatggactgggctctctccat
taatcatgaattaagaagttggcctataagtttgcctaaagcctagtctg
agtgaggtattttctttctctttttcttaaacttttaatttagtctttgt
gagtttcacactatgcaccccaattccactcatctccccatcccctcaca
tctatccttgccccttgcaacctcccctgcaaaagaaaaataaatctttc
tgtggaagctgtggtgtgccacacaatatatccttttctctaaatagctt
tacttgagaatgtttactgctacgagtcattcattggtttggtttgaggc
ttctggcttcttctatgctatcaatatgggatcctcactagaactcctct
cagatatctaactgctgccctgtgtcatggatatcctctgtctttggatc
tacaagactggccccttcattcattccaccagtccatagaacgggtggat
gttggggtgggacaactcagacctgagtgaaagctgagttgttcacccaa
cagctcttcctgcatccacaccactacagccagatcttctgctttgcaca
gcatggaagtggggctggccaggaagcattgtccccacactacacttagc
agtacagtaaagctgtggtgggggaagaca
gaattctgattggatgaggtgaggtagagctagatgaggtcagttggtgt
gagtataggagaattgttgtttagcccttgccctaagaagaagctactag
tagtaagagaagctgttgtaggggaattgttgtaagaatagcccttgctg
caagagatggtagaagaagaagctgcaagaataaggtagtagaagaagct
gctggggaatagagctctaaaggaaaaagtcacaagtaaagaagctgttg
tgtgaacctgacttggtgtctttgttgttccagttgctgaaactcatcac
gttggcaggcaacagtaagtaaagaaagtacgggcctttgaaaattttgg
taaaaaggtaaggaaactttggtaaacagtggtaggaaattttggtaaac
agcggtaaggaaagtttagtaagcagtggtaaggaaatttaggtaagtgg
ccagtttagaacctctttagttagactgtaagagtctgtggaacttttgg
aacttgaaaatgagaggtcagagtgatgccatcttgtaaagggcaaagga
aaatacagttcccaaaaggagggcattcatattttagtagacaaatagat
aggatgagtgtatcaaggccagacaggagaggcagagcagagcagaggca
aacttccaaagtgatctaaattatagaccaggcagctttacattttaaaa
atgggactttcatagatagtacagacaggtaacctcagagacttgagaaa
ggactactatagactgagaccattactgtgcctggcagacatatggccag
tggaaatggctaaaggatgtaggtagacaagtcaccaaaccaaggaagga
attatattaaatcaccagaaaggtggttgaaaaagtaacttattctgcta
gagagagcaacaccttggttggaaagtttggtgtattcctaagcctcagt
ttcttttttggaggtttgaagtgaattgtctctcttcatgaaggagaaaa
tcagaaaggttccccgggaaagggacgaaacattaagtttcttcagaata
gagatgacgaacgccacctggagaaggcttagctgaacagtttctcggaa
aaacggaacagatcactagtctcagaatgagaccagcaattcgagcacac
atgtgaaatctaacctgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_58922617_58923185
seq2: B6Ng01-235H17.b_557_1125

seq1  TTCTTTCTCTTTTTCTTAAACTTTTAATTTAGTCTTTGTGAGTTTCACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTCTTTTTCTTAAACTTTTAATTTAGTCTTTGTGAGTTTCACAC  50

seq1  TATGCACCCCAATTCCACTCATCTCCCCATCCCCTCACATCTATCCTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACCCCAATTCCACTCATCTCCCCATCCCCTCACATCTATCCTTGC  100

seq1  CCCTTGCAACCTCCCCTGCAAAAGAAAAATAAATCTTTCTGTGGAAGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGCAACCTCCCCTGCAAAAGAAAAATAAATCTTTCTGTGGAAGCTG  150

seq1  TGGTGTGCCACACAATATATCCTTTTCTCTAAATAGCTTTACTTGAGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGCCACACAATATATCCTTTTCTCTAAATAGCTTTACTTGAGAAT  200

seq1  GTTTACTGCTACGAGTCATTCATTGGTTTGGTTTGAGGCTTCTGGCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTGCTACGAGTCATTCATTGGTTTGGTTTGAGGCTTCTGGCTTCT  250

seq1  TCTATGCTATCAATATGGGATCCTCACTAGAACTCCTCTCAGATATCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGCTATCAATATGGGATCCTCACTAGAACTCCTCTCAGATATCTAA  300

seq1  CTGCTGCCCTGTGTCATGGATATCCTCTGTCTTTGGATCTACAAGACTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCCCTGTGTCATGGATATCCTCTGTCTTTGGATCTACAAGACTGG  350

seq1  CCCCTTCATTCATTCCACCAGTCCATAGAAGGGGTGGATGTTGGGGTGGG  400
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCCCTTCATTCATTCCACCAGTCCATAGAACGGGTGGATGTTGGGGTGGG  400

seq1  ACAACTCAGACCTGAGTGAAAGCTGAGTTGTTCAACCCAACAGCTC-TCC  449
      ||||||||||||||||||||||||||||||||| |||||||||||| |||
seq2  ACAACTCAGACCTGAGTGAAAGCTGAGTTGTTC-ACCCAACAGCTCTTCC  449

seq1  TGCATCCACACCACTACAGCCAGATCTTCTGCTTTGCACAGCATGG-AGT  498
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGCATCCACACCACTACAGCCAGATCTTCTGCTTTGCACAGCATGGAAGT  499

seq1  GGGGCTGGCCAGGGAAAGCACTGTCCCCACACTACACCTAGGCAGTACAG  548
      |||||||||||||  ||||| |||||||||||||||| || |||||||||
seq2  GGGGCTGGCCAGG--AAGCATTGTCCCCACACTACACTTA-GCAGTACAG  546

seq1  TAAAGCTGTGGTGGGG--AGACA  569
      ||||||||||||||||  |||||
seq2  TAAAGCTGTGGTGGGGGAAGACA  569