BAC Information

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BAC

Clone NameB6Ng01-238L02
Chromosome16 (Build37)
Map Location 33,230,469 - 33,322,718
singlet/doubletdoublet
Overlap geneOsbpl11, Snx4
Upstream geneFbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, Lrch3, EG625660, Iqcg, Rpl35a, Lmln, LOC638791
Downstream geneZfp148, Slc12a8, 4632417D23Rik, Heg1, Muc13, Itgb5, Umps, Kalrn, LOC100043670
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238L02.bB6Ng01-238L02.g
ACCGA049321GA049322
length658885
definitionB6Ng01-238L02.b B6Ng01-238L02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,322,061 - 33,322,718)(33,230,469 - 33,231,342)
sequence
gaattcaagaactgacaatgatgttttcagtttctgtgctaagaagagta
tgtgttgataaggagccatgtggccagagtggccagaaagcctaatctga
aaaagtgacatcaactttgagatcaggaaatcaagagtcaggctaagtca
ggtgaaaggatggggaagagggaacatcacgttcaaaggcccggccatgg
caccccaagatcaaagcagcttcgtggacgctcacaaaagacttctcctc
tgagggctagaagggctaaactatttttacccgtgatgtaaaagaagaac
tctagagttcaatgcctgttggattggagcccatcgcaattagtacagag
accatttaggaagctgttcatctgctcaggcaaggccagtggacgagcag
agggtgctgacagtgaggtgcagcttctgtttaggagatgccatttcatg
ttgtgtgaggcttaggggaccgggatcaaagctggtcctctcctttctga
cctgagcagccagtggcaccacagagcacacataagacaaagattcatga
attagctgagtgatgtccaaagaccctacaaaatccccagctgggaacgt
tcgctatatggagctgggactctgcaggtacaggggttgcgggtgagggg
gtgggggg
gaattcctaagccttttgcctcttcctaagcactggtctcacacgtatgt
gccaccacactctgagtgatgcagtcctgagaaccgaacttaggctttct
acatacaggggactgaggtaccttcctcagccccactgtatatctattga
tactgtgagttaggccaagaaatcttttcttttgctttcaaaacaaatct
tgtatttgaaatgaagccactgtgttctgaaagcctgcttgaattgtgga
gatgtagaccttgctattatttttaccgcttgaatcagggtctctggcgt
tcatgccaggcctgtcctgagcccagggtcctaactgaaacgctgaggtt
acaagtacaccaccatgtctgctgaatgttgatctgcatcagtatctgca
tgatactgttcagtttttaaaagtatttatattttatgtgcattggtgtt
ttgcctgcatatatgtctgtgtgaaggtgtcagttacagatggttgtgaa
ccactgtgttggtgctggaaatggaacccagttcctctggaagagcagcc
agtgtgcttaactgttgagccagctctctagctccgaggcaaacactttt
gagtttttatagatgtatttgtcttaagttgggataactgtttttatgta
ggatagttaactattttggggatgttttttattgtctagacttactgtgt
atgttttacctccgtgtatgaatgtgcaccacatgtgtgcctggtttcca
agaagaatgaatgcatcaagttctctggaactggaattacaggtggttat
tgagtcctcatgtgttgtgctgaacccaggtcttcttggaaaaactgcac
gagctcttacctcttaagggattactcattcaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_33322061_33322718
seq2: B6Ng01-238L02.b_44_701 (reverse)

seq1  CCCCCCACCCCCTCACCCGCAACCCCTGTACCTGCAGAGTCCCAGCTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCACCCCCTCACCCGCAACCCCTGTACCTGCAGAGTCCCAGCTCCA  50

seq1  TATAGCGAACGTTCCCAGCTGGGGATTTTGTAGGGTCTTTGGACATCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCGAACGTTCCCAGCTGGGGATTTTGTAGGGTCTTTGGACATCACT  100

seq1  CAGCTAATTCATGAATCTTTGTCTTATGTGTGCTCTGTGGTGCCACTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAATTCATGAATCTTTGTCTTATGTGTGCTCTGTGGTGCCACTGGC  150

seq1  TGCTCAGGTCAGAAAGGAGAGGACCAGCTTTGATCCCGGTCCCCTAAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGGTCAGAAAGGAGAGGACCAGCTTTGATCCCGGTCCCCTAAGCC  200

seq1  TCACACAACATGAAATGGCATCTCCTAAACAGAAGCTGCACCTCACTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAACATGAAATGGCATCTCCTAAACAGAAGCTGCACCTCACTGTC  250

seq1  AGCACCCTCTGCTCGTCCACTGGCCTTGCCTGAGCAGATGAACAGCTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCCTCTGCTCGTCCACTGGCCTTGCCTGAGCAGATGAACAGCTTCC  300

seq1  TAAATGGTCTCTGTACTAATTGCGATGGGCTCCAATCCAACAGGCATTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGGTCTCTGTACTAATTGCGATGGGCTCCAATCCAACAGGCATTGA  350

seq1  ACTCTAGAGTTCTTCTTTTACATCACGGGTAAAAATAGTTTAGCCCTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAGAGTTCTTCTTTTACATCACGGGTAAAAATAGTTTAGCCCTTCT  400

seq1  AGCCCTCAGAGGAGAAGTCTTTTGTGAGCGTCCACGAAGCTGCTTTGATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTCAGAGGAGAAGTCTTTTGTGAGCGTCCACGAAGCTGCTTTGATC  450

seq1  TTGGGGTGCCATGGCCGGGCCTTTGAACGTGATGTTCCCTCTTCCCCATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGTGCCATGGCCGGGCCTTTGAACGTGATGTTCCCTCTTCCCCATC  500

seq1  CTTTCACCTGACTTAGCCTGACTCTTGATTTCCTGATCTCAAAGTTGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACCTGACTTAGCCTGACTCTTGATTTCCTGATCTCAAAGTTGATG  550

seq1  TCACTTTTTCAGATTAGGCTTTCTGGCCACTCTGGCCACATGGCTCCTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTTTCAGATTAGGCTTTCTGGCCACTCTGGCCACATGGCTCCTTA  600

seq1  TCAACACATACTCTTCTTAGCACAGAAACTGAAAACATCATTGTCAGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACACATACTCTTCTTAGCACAGAAACTGAAAACATCATTGTCAGTTC  650

seq1  TTGAATTC  658
      ||||||||
seq2  TTGAATTC  658

seq1: chr16_33230469_33231342
seq2: B6Ng01-238L02.g_68_952

seq1  GAATTCCTAAGCCTTTTGCCTCTTCCTAAGCACTGGTCTCACACGTATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAGCCTTTTGCCTCTTCCTAAGCACTGGTCTCACACGTATGT  50

seq1  GCCACCACACTCTGAGTGATGCAGTCCTGAGAACCGAACTTAGGCTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCACACTCTGAGTGATGCAGTCCTGAGAACCGAACTTAGGCTTTCT  100

seq1  ACATACAGGGGACTGAGGTACCTTCCTCAGCCCCACTGTATATCTATTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACAGGGGACTGAGGTACCTTCCTCAGCCCCACTGTATATCTATTGA  150

seq1  TACTGTGAGTTAGGCCAAGAAATCTTTTCTTTTGCTTTCAAAACAAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGAGTTAGGCCAAGAAATCTTTTCTTTTGCTTTCAAAACAAATCT  200

seq1  TGTATTTGAAATGAAGCCACTGTGTTCTGAAAGCCTGCTTGAATTGTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTGAAATGAAGCCACTGTGTTCTGAAAGCCTGCTTGAATTGTGGA  250

seq1  GATGTAGACCTTGCTATTATTTTTACCGCTTGAATCAGGGTCTCTGGCGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAGACCTTGCTATTATTTTTACCGCTTGAATCAGGGTCTCTGGCGT  300

seq1  TCATGCCAGGCCTGTCCTGAGCCCAGGGTCCTAACTGAAACGCTGAGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCCAGGCCTGTCCTGAGCCCAGGGTCCTAACTGAAACGCTGAGGTT  350

seq1  ACAAGTACACCACCATGTCTGCTGAATGTTGATCTGCATCAGTATCTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTACACCACCATGTCTGCTGAATGTTGATCTGCATCAGTATCTGCA  400

seq1  TGATACTGTTCAGTTTTTAAAAGTATTTATATTTTATGTGCATTGGTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACTGTTCAGTTTTTAAAAGTATTTATATTTTATGTGCATTGGTGTT  450

seq1  TTGCCTGCATATATGTCTGTGTGAAGGTGTCAGTTACAGATGGTTGTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGCATATATGTCTGTGTGAAGGTGTCAGTTACAGATGGTTGTGAA  500

seq1  CCACTGTGTTGGTGCTGGAAATGGAACCCAGTTCCTCTGGAAGAGCAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTGTTGGTGCTGGAAATGGAACCCAGTTCCTCTGGAAGAGCAGCC  550

seq1  AGTGTGCTTAACTGTTGAGCCAGCTCTCTAGCTCCGAGGCAAACACTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGCTTAACTGTTGAGCCAGCTCTCTAGCTCCGAGGCAAACACTTTT  600

seq1  GAGTTTTTATAGATGTATTTGTCTTAAGTTGGGATAACTG-TTTTATGTA  649
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAGTTTTTATAGATGTATTTGTCTTAAGTTGGGATAACTGTTTTTATGTA  650

seq1  GGATAGTTAACTATTT--GGGATGTTTTT--ATCTCTAGACTTACTGTGT  695
      ||||||||||||||||  |||||||||||   | ||||||||||||||||
seq2  GGATAGTTAACTATTTTGGGGATGTTTTTTATTGTCTAGACTTACTGTGT  700

seq1  ATGTTTTACCTCCGTGTATGAATGTGCACCACATGTGTGCCTGGTTTCCA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTACCTCCGTGTATGAATGTGCACCACATGTGTGCCTGGTTTCCA  750

seq1  AGAAGAATGAATGCATCAAGTTCTCTGGAACTGGAATTACAGGTGGTTA-  794
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGAAGAATGAATGCATCAAGTTCTCTGGAACTGGAATTACAGGTGGTTAT  800

seq1  TGAGTCCTCATGTG-TGTGCTGAACCCAGGTCTTC-TGGAAAAACTGCAC  842
      |||||||||||||| |||||||||||||||||||| ||||||||||||||
seq2  TGAGTCCTCATGTGTTGTGCTGAACCCAGGTCTTCTTGGAAAAACTGCAC  850

seq1  GAGCTCTTACCTCTTAAGG--ATACTCA-TCAGGG  874
      |||||||||||||||||||   |||||| ||||||
seq2  GAGCTCTTACCTCTTAAGGGATTACTCATTCAGGG  885