BAC Information

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BAC

Clone NameB6Ng01-241A22
Chromosome16 (Build37)
Map Location 57,380,193 - 57,513,744
singlet/doubletdoublet
Overlap gene2610528E23Rik, 4631422O05Rik
Upstream geneAbi3bp, Tfg, Gpr128, Tmem45a, LOC668026, LOC668036, 2310005G13Rik, Tomm70a, Nit2, Tbc1d23, Tmem30c
Downstream geneCol8a1, LOC435480, LOC629342, LOC100043477, Dcbld2, St3gal6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241A22.bB6Ng01-241A22.g
ACCGA051069GA051070
length1,0791,150
definitionB6Ng01-241A22.b B6Ng01-241A22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,380,193 - 57,381,256)(57,512,593 - 57,513,744)
sequence
gaattccttcaggaggagtgtattagttagggttttactgctgtgaacaa
acaccatgaccaaggcaagtcttatgaaaaaacaacatttaattggggct
ggcttacaggttcagaggttcagtccattatcatcaaggtgggagcatgg
cagtatccaggcaggcatggcacaggaggagctgagagttctatgtcttc
atccaaaggctgctagtggaagactgacttccaggcaaatagggtgagga
tcttatgcccacacccacagtgacacacccatcccaaccaggtcacacct
attccaacaaagccacacctccagatggtgccactcccaggtccaaggat
atacaaaccatcagaaggaggtaggatgcccggaatatcagccatctcgg
ctaagtatgttttcattactttgtaatcaagctatgtaggacaataagct
cttctacactggtaatgctttttccatgcaaactgtaggtaactggctct
ggctgcatggtgaattaacgtaaacacttccaagacgattccattacatg
actctctttcacctgatgtgtggctcctgtctgtgaggctatggagaagc
tggggctctgaaccactgcatgagaggctatggcttagtaaagatcttta
tatattttaaagtgccataattctacaatcttgacagacatcctgaagat
aagaaggagactgaaggggaatgcagaggtattatgaaataattcttgga
tatactcaagtgggtttgtaggggctagagggggggtgggccttggccag
cagttaagagtgtacactactctttcagagggacccacatttgggttccc
agcaatctgcactgggtgccctcatactgtctggtaactgcagctctaga
ggatctgactccatcttctggtctccatgggcactgcattcaagagccac
aaacctttgcaacaagacaacatacatattttatataatgaaaaaataag
tgtaatatttaatgggatcatattaatacctacactgtggctagtccaca
ttcgacccactaaaaatactgtgggtgaa
gaattcagtatttatattcccatggttattattgtgctatattgataata
tccttggtcattaacttcgctcacctggaccctcagatctttgagaccag
gatgtttcctattaaccctgccaggccactgtaacatttgtaacactttg
cagaaggggccattgtttcatcccgtgcagcttttacctctcacattcct
gctccaataagtttatgaattcatcactcttcttcatatattctttgtgt
tttctcttttcttcctccatctccattatggtttgccggtgggatctttc
taccattaagagttgttccaagatccgcctgtgagattctttatgctttt
ctacgactttatccaactacaagagaaaatgtatttattgcctgttaaat
tagaaattattcacaatactttcatatttcagtcgtttacatatttctgt
gcttttaccaattaacttgataggtttcttaatccttagatagttttgaa
aacatgattttacagattagatgcaaggtatagcaactgataaaaatact
gatttttgctttgttttatagaagattgaaaaattgtgacttgtgaattt
aatgtcacataccattttatgatatttaatgcacatcttaaaaggcatgc
aattaactgaaaaatccaaagcacaaagtaaccaaatgaagtagtttaga
acctgatgaattctctctgacgtctaaattcttgccttgactgttcagtt
ttcttatgtgggcttatgatgacaaattatcagacattctcaaaagattt
ggctatgtcattgttcatgattttaataatcttgggccagtcattttgtg
actattaagttgtattgcctgcctgtagaggccttgctgatatctagttt
cctaaaaggtagtgttgagttttttttataaaacaaggtataaccactta
tagacatctgaaattgcgtgccattgcatggagagatcagagagatttga
cctgaaagtgcttatgctttccctaggagataatattaacctaagaaaca
actgcaacaggtagttgctgaaccacttgagtactgaagatactagcaag
atggacctgcctgtccctctccctttaacctgcctctgtagattggacac

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_57380193_57381256
seq2: B6Ng01-241A22.b_43_1121

seq1  GAATTCCTTCAGGAGGAGTGTATTAGTTAGGGTTTTACTGCTGTGAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCAGGAGGAGTGTATTAGTTAGGGTTTTACTGCTGTGAACAA  50

seq1  ACACCATGACCAAGGCAAGTCTTATGAAAAAACAACATTTAATTGGGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATGACCAAGGCAAGTCTTATGAAAAAACAACATTTAATTGGGGCT  100

seq1  GGCTTACAGGTTCAGAGGTTCAGTCCATTATCATCAAGGTGGGAGCATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTACAGGTTCAGAGGTTCAGTCCATTATCATCAAGGTGGGAGCATGG  150

seq1  CAGTATCCAGGCAGGCATGGCACAGGAGGAGCTGAGAGTTCTATGTCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATCCAGGCAGGCATGGCACAGGAGGAGCTGAGAGTTCTATGTCTTC  200

seq1  ATCCAAAGGCTGCTAGTGGAAGACTGACTTCCAGGCAAATAGGGTGAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAAGGCTGCTAGTGGAAGACTGACTTCCAGGCAAATAGGGTGAGGA  250

seq1  TCTTATGCCCACACCCACAGTGACACACCCATCCCAACCAGGTCACACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATGCCCACACCCACAGTGACACACCCATCCCAACCAGGTCACACCT  300

seq1  ATTCCAACAAAGCCACACCTCCAGATGGTGCCACTCCCAGGTCCAAGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAACAAAGCCACACCTCCAGATGGTGCCACTCCCAGGTCCAAGGAT  350

seq1  ATACAAACCATCAGAAGGAGGTAGGATGCCCGGAATATCAGCCATCTCGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAACCATCAGAAGGAGGTAGGATGCCCGGAATATCAGCCATCTCGG  400

seq1  CTAAGTATGTTTTCATTACTTTGTAATCAAGCTATGTAGGACAATAAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTATGTTTTCATTACTTTGTAATCAAGCTATGTAGGACAATAAGCT  450

seq1  CTTCTACACTGGTAATGCTTTTTCCATGCAAACTGTAGGTAACTGGCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTACACTGGTAATGCTTTTTCCATGCAAACTGTAGGTAACTGGCTCT  500

seq1  GGCTGCATGGTGAATTAACGTAAACACTTCCAAGACGATTCCATTACATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCATGGTGAATTAACGTAAACACTTCCAAGACGATTCCATTACATG  550

seq1  ACTCTCTTTCACCTGATGTGTGGCTCCTGTCTGTGAGGCTATGGAGAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTTTCACCTGATGTGTGGCTCCTGTCTGTGAGGCTATGGAGAAGC  600

seq1  TGGGGCTCTGAACCACTGCATGAGAGGCTATGGCTTAGTAAAGATCTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCTCTGAACCACTGCATGAGAGGCTATGGCTTAGTAAAGATCTTTA  650

seq1  TATATTTTAAAGTGCCATAATTCTACAATCTTGACAGACATCCTGAAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTAAAGTGCCATAATTCTACAATCTTGACAGACATCCTGAAGAT  700

seq1  AAGAAGGAGACTGAAGGGGAATGCAGAGGTATTATGAAATAATTCTTGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGGAGACTGAAGGGGAATGCAGAGGTATTATGAAATAATTCTTGGA  750

seq1  TATACTCAAGTGGGTTTGTAGGGGCTAGA-GGGGGGTGGG-CTTGG-CAG  797
      ||||||||||||||||||||||||||||| |||||||||| ||||| |||
seq2  TATACTCAAGTGGGTTTGTAGGGGCTAGAGGGGGGGTGGGCCTTGGCCAG  800

seq1  CAGTTAAGAGTGTACACTACTCTTTCAGA-GGACCCACATTT-GGTTCCC  845
      ||||||||||||||||||||||||||||| |||||||||||| |||||||
seq2  CAGTTAAGAGTGTACACTACTCTTTCAGAGGGACCCACATTTGGGTTCCC  850

seq1  AGC-ATCTGCACTGGGTG-CCTCATACTGTCT-GTAACTGCAGCTCTAGA  892
      ||| |||||||||||||| ||||||||||||| |||||||||||||||||
seq2  AGCAATCTGCACTGGGTGCCCTCATACTGTCTGGTAACTGCAGCTCTAGA  900

seq1  GGATCTGACTCCATCTTCTGGTCTCCATGGGCACTGCATTCAAGAG-CAC  941
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGATCTGACTCCATCTTCTGGTCTCCATGGGCACTGCATTCAAGAGCCAC  950

seq1  AAACC-TTGCACAAAGACAACATACATA-TTTATATAATGAAAAAAATAA  989
      ||||| |||||  ||||||||||||||| ||||||||||| |||||||||
seq2  AAACCTTTGCAACAAGACAACATACATATTTTATATAATG-AAAAAATAA  999

seq1  GTGT-ATATTTAAAGGGATCATATT-ATACCTACCACTGT-GCTAGTCCA  1036
      |||| |||||||| ||||||||||| ||||||| |||||| |||||||||
seq2  GTGTAATATTTAATGGGATCATATTAATACCTA-CACTGTGGCTAGTCCA  1048

seq1  C-TTCCA-CCACTAAAATATCTGT-GGTGAA  1064
      | ||| | |||||||||   |||| ||||||
seq2  CATTCGACCCACTAAAAATACTGTGGGTGAA  1079

seq1: chr16_57512593_57513744
seq2: B6Ng01-241A22.g_67_1216 (reverse)

seq1  GTGTCCAATCTACAGAGCCAGCT--AAAGGAGAGGG-CAGGCA-GTCATT  46
      ||||||||||||||||| ||| |  || |||||||| |||||| |||  |
seq2  GTGTCCAATCTACAGAGGCAGGTTAAAGGGAGAGGGACAGGCAGGTCCAT  50

seq1  CCCTGCTAGTA-CTTCAGTACTC-AGTGG-TCAGCCACCTACCCTGTTTC  93
       | |||||||| ||||||||||| ||||| |||| || ||| |||| || 
seq2  -CTTGCTAGTATCTTCAGTACTCAAGTGGTTCAG-CAACTA-CCTG-TTG  96

seq1  CAGTTGTTTCTTAGGTTTATATTATCTTCCTAGGGAAAGCATAAGCACTT  143
      ||||||||||||||||| |||||||| |||||||||||||||||||||||
seq2  CAGTTGTTTCTTAGGTTAATATTATC-TCCTAGGGAAAGCATAAGCACTT  145

seq1  TCAGTTCAAATCTCTCTTGATCTCTCCATGCCAATGGCACGCAATTTTCA  193
      |||| ||||||||||| ||||||||||||| ||||||||||||| |||||
seq2  TCAGGTCAAATCTCTC-TGATCTCTCCATG-CAATGGCACGCAA-TTTCA  192

seq1  GATGTCTATAAGTGGTTTAATACCTTGTTTTATAAAAAAAACTCAACACT  243
      |||||||||||||||||  |||||||||||||||||||||||||||||||
seq2  GATGTCTATAAGTGGTT--ATACCTTGTTTTATAAAAAAAACTCAACACT  240

seq1  ACCTTTTAGGAAACTAGATATCAGCAAGGCCTCTACAGGCAGGCAATACA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTAGGAAACTAGATATCAGCAAGGCCTCTACAGGCAGGCAATACA  290

seq1  ACTTAATAGTCACAAAATGACTGG-CCAAGATTATTAAAATCATGAACAA  342
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ACTTAATAGTCACAAAATGACTGGCCCAAGATTATTAAAATCATGAACAA  340

seq1  TGACATAGCCAAATCTTTTGAGAATGTCTGATAATTTGTCATCATAAGCC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATAGCCAAATCTTTTGAGAATGTCTGATAATTTGTCATCATAAGCC  390

seq1  CACATAAGAAAACTGAACAGTCAAGGCAAGAATTTAGACGTCAGAGAGAA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAAGAAAACTGAACAGTCAAGGCAAGAATTTAGACGTCAGAGAGAA  440

seq1  TTCATCAGGTTCTAAACTACTTCATTTGGTTACTTTGTGCTTTGGATTTT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCAGGTTCTAAACTACTTCATTTGGTTACTTTGTGCTTTGGATTTT  490

seq1  TCAGTTAATTGCATGCCTTTTAAGATGTGCATTAAATATCATAAAATGGT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTAATTGCATGCCTTTTAAGATGTGCATTAAATATCATAAAATGGT  540

seq1  ATGTGACATTAAATTCACAAGTCACAATTTTTCAATCTTCTATAAAACAA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGACATTAAATTCACAAGTCACAATTTTTCAATCTTCTATAAAACAA  590

seq1  AGCAAAAATCAGTATTTTTATCAGTTGCTATACCTTGCATCTAATCTGTA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAATCAGTATTTTTATCAGTTGCTATACCTTGCATCTAATCTGTA  640

seq1  AAATCATGTTTTCAAAACTATCTAAGGATTAAGAAACCTATCAAGTTAAT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATGTTTTCAAAACTATCTAAGGATTAAGAAACCTATCAAGTTAAT  690

seq1  TGGTAAAAGCACAGAAATATGTAAACGACTGAAATATGAAAGTATTGTGA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAAAGCACAGAAATATGTAAACGACTGAAATATGAAAGTATTGTGA  740

seq1  ATAATTTCTAATTTAACAGGCAATAAATACATTTTCTCTTGTAGTTGGAT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTCTAATTTAACAGGCAATAAATACATTTTCTCTTGTAGTTGGAT  790

seq1  AAAGTCGTAGAAAAGCATAAAGAATCTCACAGGCGGATCTTGGAACAACT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCGTAGAAAAGCATAAAGAATCTCACAGGCGGATCTTGGAACAACT  840

seq1  CTTAATGGTAGAAAGATCCCACCGGCAAACCATAATGGAGATGGAGGAAG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATGGTAGAAAGATCCCACCGGCAAACCATAATGGAGATGGAGGAAG  890

seq1  AAAAGAGAAAACACAAAGAATATATGAAGAAGAGTGATGAATTCATAAAC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGAAAACACAAAGAATATATGAAGAAGAGTGATGAATTCATAAAC  940

seq1  TTATTGGAGCAGGAATGTGAGAGGTAAAAGCTGCACGGGATGAAACAATG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGGAGCAGGAATGTGAGAGGTAAAAGCTGCACGGGATGAAACAATG  990

seq1  GCCCCTTCTGCAAAGTGTTACAAATGTTACAGTGGCCTGGCAGGGTTAAT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTTCTGCAAAGTGTTACAAATGTTACAGTGGCCTGGCAGGGTTAAT  1040

seq1  AGGAAACATCCTGGTCTCAAAGATCTGAGGGTCCAGGTGAGCGAAGTTAA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACATCCTGGTCTCAAAGATCTGAGGGTCCAGGTGAGCGAAGTTAA  1090

seq1  TGACCAAGGATATTATCAATATAGCACAATAATAACCATGGGAATATAAA  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAAGGATATTATCAATATAGCACAATAATAACCATGGGAATATAAA  1140

seq1  TACTGAATTC  1152
      ||||||||||
seq2  TACTGAATTC  1150