BAC Information

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BAC

Clone NameB6Ng01-241D13
Chromosome16 (Build37)
Map Location 32,058,046 - 32,191,807
singlet/doubletdoublet
Overlap genePak2, Pigx, 1500031L02Rik, Lrrc33, Bex6
Upstream geneAI480653, Centb2, Ppp1r2, Apod, 1700007E05Rik, Bdh1, Gm536, Dlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5
Downstream geneFbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, Lrch3, EG625660, Iqcg, Rpl35a, Lmln, LOC638791, Osbpl11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241D13.bB6Ng01-241D13.g
ACCGA051193GA051194
length1,1311,125
definitionB6Ng01-241D13.b B6Ng01-241D13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,058,046 - 32,059,173)(32,190,668 - 32,191,807)
sequence
gaattctcctgtttccatctctctcttcttgttataggaacaccaggaat
atgtactactatatctggctttacatgggttttggggatccaaactaagg
ccctgacactagcttggcgtgttttacccaccaaaccatctctccagacc
tatttttgcttttaaatcatccatccatccatccatccatctatccatcc
atccatccattcaggatgcacatgaaggagtatgttaggtcagcaaacaa
cttgaaacagtgaatttgctcctttctgtgtgggtcctgaggatcagact
caggtcatgaggcttggagacagctaccctgaccatctgagctctcatcc
atcttataaaaactgtggaggacagtggtagaagatccctactttacata
aattctgatgtaaaagtacgtatgttagaaaatcaaacaactcctcagta
aacaaggtattgaatggtaattgaatcttgatcttttgtgagaaaacttt
tatctacaataaaaatgaggccaactaaatccacacaaaatttaaaataa
actttatttcttcaagttagctcaaattctaggacttggagaaaagcagc
tataacctgagaaccgagagatgagaacattcttacttccctctgagtcc
cgcagctcttctttccttcacactcgctacttgctctggggcattacttt
gacacacattacctgccacatttcacaggcgagtatcaagaagtaagaga
cttacctaaaacatgacacagatctaatcctagtaccagaccccaagcct
tataaaaaccgtggagtatagcagtagaagatccctaccttacataaatt
ctgatattaaattatatgttagaaaaccaacattcctcatgcttttctct
atactaatccagtgtgctggatgacttcccggaactgaattataactgtg
acaattagtcaataacttacgtcacttttctccccccaagttcactcagc
ccaaaagggccaaggactgtgcataccttagaacagactgcccgactgac
tcatgtgacatgctctgctcccccagtgaaagctatccttctgatgtagc
agtcctttttctcacccagtcggtcactaga
gaattcactctgtagaccaggctggccttgaactcacagagacccacctg
cctctgcttcccctttgctgagtttaaagtcacatgtcaccaccgccctg
tggcccttggcctcatgatgtagctcaggctggctttgaactcactatga
tgctctagctggtcttgaattcctgtctcctttatctcatgaatgctgag
gtagaagacgtggaccatcgccatgcccggcctattttcaggtttattta
ttttatcttacgtgcatgggtgttttgcctgcatgtatgtgtctgttacc
atgtgcatgcctggtgtttatggaggtcagaagagggcctcagatctcct
ggaactggagtttcaaatggttgtgctccaccatgtcaaagaaaaaaaaa
tgtttccaataaaaaagattccacttgggtaaaaatttaaaaatgaatac
aaatgtaaatatgaaccagatgtgctccattgcacgtgcctttaatccag
cccttgaacttgaggcgggcagatctctctatgggctgggggctagcctg
atttatctacatagtgagtaccagggtagctgggactacatagtgaaccc
ctgtcaaaaaagaaaaaagaaacatcgcaaacaagtgttatggaaagaca
atgagaaattaaattttcttaaaagggagtttgttttagaaaatacagtt
ctgatgtaaataattaatgctggtacacttaatctgaaatgtttgtggca
ttcgggtattgggtctgtcatcacaggacttgggaggttggagcagaaga
tattgggttcaagggcaggctgggttacacagcaaagctctgtctcaaag
acagagaggaaccaagaccctccctgaggacaaaaatgacccgagtcaaa
atgtctagcctctttcctggtcagggagaccccatacatacatttgaggt
gcatacaagcttttattaattttcatttaggtccggctgcatgaacatga
tgagacttatgtcctggaatggagtttctttcagtgtgaaatacagggtc
aaacttcagaactctgtctgctcctagaacagcacgtgggtattctgtgc
caggcctctacctggacagtattta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_32058046_32059173
seq2: B6Ng01-241D13.b_48_1178

seq1  GAATTCTCCTGTTTCCATCTCTCTCTTCTTGTTATAGGAACACCAGGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGTTTCCATCTCTCTCTTCTTGTTATAGGAACACCAGGAAT  50

seq1  ATGTACTACTATATCTGGCTTTACATGGGTTTTGGGGATCCAAACTAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACTACTATATCTGGCTTTACATGGGTTTTGGGGATCCAAACTAAGG  100

seq1  CCCTGACACTAGCTTGGCGTGTTTTACCCACCAAACCATCTCTCCAGACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGACACTAGCTTGGCGTGTTTTACCCACCAAACCATCTCTCCAGACC  150

seq1  TATTTTTGCTTTTAAATCATCCATCCATCCATCCATCCATCTATCCATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTGCTTTTAAATCATCCATCCATCCATCCATCCATCTATCCATCC  200

seq1  ATCCATCCATTCAGGATGCACATGAAGGAGTATGTTAGGTCAGCAAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCCATTCAGGATGCACATGAAGGAGTATGTTAGGTCAGCAAACAA  250

seq1  CTTGAAACAGTGAATTTGCTCCTTTCTGTGTGGGTCCTGAGGATCAGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAACAGTGAATTTGCTCCTTTCTGTGTGGGTCCTGAGGATCAGACT  300

seq1  CAGGTCATGAGGCTTGGAGACAGCTACCCTGACCATCTGAGCTCTCATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCATGAGGCTTGGAGACAGCTACCCTGACCATCTGAGCTCTCATCC  350

seq1  ATCTTATAAAAACTGTGGAGGACAGTGGTAGAAGATCCCTACTTTACATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATAAAAACTGTGGAGGACAGTGGTAGAAGATCCCTACTTTACATA  400

seq1  AATTCTGATGTAAAAGTACGTATGTTAGAAAATCAAACAACTCCTCAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGATGTAAAAGTACGTATGTTAGAAAATCAAACAACTCCTCAGTA  450

seq1  AACAAGGTATTGAATGGTAATTGAATCTTGATCTTTTGTGAGAAAACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGGTATTGAATGGTAATTGAATCTTGATCTTTTGTGAGAAAACTTT  500

seq1  TATCTACAATAAAAATGAGGCCAACTAAATCCACACAAAATTTAAAATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTACAATAAAAATGAGGCCAACTAAATCCACACAAAATTTAAAATAA  550

seq1  ACTTTATTTCTTCAAGTTAGCTCAAATTCTAGGACTTGGAGAAAAGCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATTTCTTCAAGTTAGCTCAAATTCTAGGACTTGGAGAAAAGCAGC  600

seq1  TATAACCTGAGAACCGAGAGATGAGAACATTCTTACTTCCCTCTGAGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACCTGAGAACCGAGAGATGAGAACATTCTTACTTCCCTCTGAGTCC  650

seq1  CGCAGCTCTTCTTTCCTTCACACTCGCTACTTGCTCTGGGGCATTACTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGCTCTTCTTTCCTTCACACTCGCTACTTGCTCTGGGGCATTACTTT  700

seq1  GACACACATTACCTGCCACATTTCACAGGCGAGTATCAAGAAGTAAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACATTACCTGCCACATTTCACAGGCGAGTATCAAGAAGTAAGAGA  750

seq1  CTTACCTAAAACATGACACAGATCTAATCCTAGTACCAGACCCCAAGCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCTAAAACATGACACAGATCTAATCCTAGTACCAGACCCCAAGCCT  800

seq1  TATAAAAACCGTGGAGTATAGCAGTAGAAGATCCCTACCTTACATAAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAACCGTGGAGTATAGCAGTAGAAGATCCCTACCTTACATAAATT  850

seq1  CTGATATTAAATTATATGTTAGAAAACCAACATTCCTCATGCTTTTCTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATATTAAATTATATGTTAGAAAACCAACATTCCTCATGCTTTTCTCT  900

seq1  ATACTAATCCAGTGTGCTGGATGACTT-CCGGAACTGAATTATAACTGTG  949
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATACTAATCCAGTGTGCTGGATGACTTCCCGGAACTGAATTATAACTGTG  950

seq1  ACAATTAGTCAATAACTTACGTCACTTTTCT-CCCCCAAGTTCACTCAGC  998
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ACAATTAGTCAATAACTTACGTCACTTTTCTCCCCCCAAGTTCACTCAGC  1000

seq1  CCAAA--GGGCAAGGACTGTGCATACCTTAGACAGGACTG-CCGACTGAC  1045
      |||||  || ||||||||||||||||||||||   ||||| |||||||||
seq2  CCAAAAGGGCCAAGGACTGTGCATACCTTAGAACAGACTGCCCGACTGAC  1050

seq1  TCATGTTGACCATGCTCTGCT-CCCCAGTGAAGCCTATCCCTCCTGAATG  1094
      ||||| ||| ||||||||||| ||||||||||  |||| ||| ||| |||
seq2  TCATG-TGA-CATGCTCTGCTCCCCCAGTGAAAGCTAT-CCTTCTG-ATG  1096

seq1  TAGCAGTCC-TTTTCTCACCCAGCCGTTCACTAGA  1128
      ||||||||| ||||||||||||| || ||||||||
seq2  TAGCAGTCCTTTTTCTCACCCAGTCGGTCACTAGA  1131

seq1: chr16_32190668_32191807
seq2: B6Ng01-241D13.g_66_1190 (reverse)

seq1  TAAATTACTGTCCAGTTTAGGGAGGGCCTGCACAGATTACCCCACCGGTG  50
      |||| |||||||||| |    |||| |  ||||||| || |||||  |||
seq2  TAAA-TACTGTCCAGGT---AGAGGCCTGGCACAGAATA-CCCAC--GTG  43

seq1  CTGTCTAAGGAGCAGACAGAGGTCTGGAGGTTGACACTGTAATTTTCACA  100
      ||||   |||||||||||||| |||| || ||||| |||||  |||||| 
seq2  CTGTTCTAGGAGCAGACAGAGTTCTGAAGTTTGACCCTGTA--TTTCAC-  90

seq1  ACTGAAAGAAACTCCATTCCAGGAACCATAAGTCTCATCATGTTCATGCA  150
      ||||||||||||||||||||||||  ||||||||||||||||||||||||
seq2  ACTGAAAGAAACTCCATTCCAGGA--CATAAGTCTCATCATGTTCATGCA  138

seq1  GCCCGGACCTAAATGGAAAATTAAT-AAAGCTTGTATGCACCTCAAATGT  199
      | |||||||||||| |||||||||| ||||||||||||||||||||||||
seq2  G-CCGGACCTAAAT-GAAAATTAATAAAAGCTTGTATGCACCTCAAATGT  186

seq1  ATGTATGGGGTCTCCCTGACCAGGGAAAGAGGCTAGACATTTTGACTCGG  249
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATGTATGGGGTCTCCCTGACCA-GGAAAGAGGCTAGACATTTTGACTCGG  235

seq1  GTCATTTTTGTCCTCAGGGAGGGTCTTGGTCCCTCTCTGTCTTTGAGACA  299
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GTCATTTTTGTCCTCAGGGAGGGTCTTGGTTCCTCTCTGTCTTTGAGACA  285

seq1  GAGCTTTGCTGTGTAACCCAGCCTGCCCTTGAACCCAATATCTTCCTGCT  349
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GAGCTTTGCTGTGTAACCCAGCCTGCCCTTGAACCCAATATCTT-CTGCT  334

seq1  CCAACCTCCCAAGTCCTGTGATGACAGACCCAATACCCGAATGCCACAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCTCCCAAGTCCTGTGATGACAGACCCAATACCCGAATGCCACAAA  384

seq1  CATTTCAGATTAAGTGTACCAGCATTAATTATTTACATCAGAACTGTATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCAGATTAAGTGTACCAGCATTAATTATTTACATCAGAACTGTATT  434

seq1  TTCTAAAACAAACTCCCTTTTAAGAAAATTTAATTTCTCATTGTCTTTCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAACAAACTCCCTTTTAAGAAAATTTAATTTCTCATTGTCTTTCC  484

seq1  ATAACACTTGTTTGCGATGTTTCTTTTTTCTTTTTTGACAGGGGTTCACT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACACTTGTTTGCGATGTTTCTTTTTTCTTTTTTGACAGGGGTTCACT  534

seq1  ATGTAGTCCCAGCTACCCTGGTACTCACTATGTAGATAAATCAGGCTAGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGTCCCAGCTACCCTGGTACTCACTATGTAGATAAATCAGGCTAGC  584

seq1  CCCCAGCCCATAGAGAGATCTGCCCGCCTCAAGTTCAAGGGCTGGATTAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGCCCATAGAGAGATCTGCCCGCCTCAAGTTCAAGGGCTGGATTAA  634

seq1  AGGCACGTGCAATGGAGCACATCTGGTTCATATTTACATTTGTATTCATT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACGTGCAATGGAGCACATCTGGTTCATATTTACATTTGTATTCATT  684

seq1  TTTAAATTTTTACCCAAGTGGAATCTTTTTTATTGGAAACATTTTTTTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTTTTACCCAAGTGGAATCTTTTTTATTGGAAACATTTTTTTTT  734

seq1  CTTTGACATGGTGGAGCACAACCATTTGAAACTCCAGTTCCAGGAGATCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACATGGTGGAGCACAACCATTTGAAACTCCAGTTCCAGGAGATCT  784

seq1  GAGGCCCTCTTCTGACCTCCATAAACACCAGGCATGCACATGGTAACAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCCTCTTCTGACCTCCATAAACACCAGGCATGCACATGGTAACAGA  834

seq1  CACATACATGCAGGCAAAACACCCATGCACGTAAGATAAAATAAATAAAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACATGCAGGCAAAACACCCATGCACGTAAGATAAAATAAATAAAC  884

seq1  CTGAAAATAGGCCGGGCATGGCGATGGTCCACGTCTTCTACCTCAGCATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAATAGGCCGGGCATGGCGATGGTCCACGTCTTCTACCTCAGCATT  934

seq1  CATGAGATAAAGGAGACAGGAATTCAAGACCAGCTAGAGCATCATAGTGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGATAAAGGAGACAGGAATTCAAGACCAGCTAGAGCATCATAGTGA  984

seq1  GTTCAAAGCCAGCCTGAGCTACATCATGAGGCCAAGGGCCACAGGGCGGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAAGCCAGCCTGAGCTACATCATGAGGCCAAGGGCCACAGGGCGGT  1034

seq1  GGTGACATGTGACTTTAAACTCAGCAAAGGGGAAGCAGAGGCAGGTGGGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACATGTGACTTTAAACTCAGCAAAGGGGAAGCAGAGGCAGGTGGGT  1084

seq1  CTCTGTGAGTTCAAGGCCAGCCTGGTCTACAGAGTGAATTC  1140
      |||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGAGTTCAAGGCCAGCCTGGTCTACAGAGTGAATTC  1125