BAC Information

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BAC

Clone NameB6Ng01-241K17
Chromosome16 (Build37)
Map Location 22,696,455 - 22,697,547
singlet/doubletsinglet
Overlap genenone
Upstream geneEhhadh, LOC100043489, LOC546659, Map3k13, LOC624037, Tmem41a, Liph, Senp2, EG239760, Igf2bp2, EG545152, EG666421, Sfrs10, LOC100043507, Etv5, Dgkg, LOC671242, LOC666459
Downstream geneCrygs, Tbccd1, Dnajb11, Ahsg, Fetub, Hrg, Kng2, LOC624311, LOC666486, LOC666489, Kng1, LOC666493, Eif4a2, Rfc4, Adipoq, LOC100043541, EG625835, BC106179, St6gal1, Rtp1, Masp1, LOC100043018, Rtp4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241K17.bB6Ng01-241K17.g
ACCGA051524GA051525
length1,0921,187
definitionB6Ng01-241K17.b B6Ng01-241K17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgaggtagcccaagctggcctagaactcatgaggtagcccagg
ttggtcaagaactcaaagtccttctgcctcggccttcagatgctgagtct
gcaggtgtccattatgacgcctcaccattctttttaattatgatttttaa
atttgtagtagttcacatagtttctaaatttatgacttatgaatttggtg
tttctggaattctacatttatacttttgggccaattgaccacaggttact
gaatccatggaaaatgaggctgtaaatcacaggcattgcttcactgggct
tagctatgtgtgggagggactctgtgagatatctggggatgttggtagag
gattgtgaggctaaggcatagagaaagagctagagacataactgaagctc
accgtaaggtggaaagataccaagagggtatcatacagtgtgcgtcacaa
gattgctgatgtattggcttcccatcactacaataggatgcctgatacaa
gcaacttatgaagcaaagaggtttattttggctaacggttctgagttcaa
gccaagatcaggtagttacgcttgtttaggcctccagaaacatttacacc
acatggtaggaatgcctgtatgatggagcgctcagtctaaaccagaagcc
agaggctataattccctgcaggaccttaaggccttccagaggccaactgc
tacaaagtccacaggttctgtctttttctttttgagtagaatttaagacg
gagtttcatgtaccccatgcttgtctcagatttactgttcagccagggac
cttaaaatcctgatattcctgtcccaggtgctgggactgtaaacatgtca
ccactcttggccaacaagggctttgctaccaacagcccatggaacaagcc
tttatctatggatctttggaagacacacccagattcaacatcaatagtgt
gctatacaattcctagtccctcttgacaacttacttcaaaaaataaactc
acttagtcaccagaatatttacccagatacactctttctagccttgttga
aaataatgatctcttaacattttctcctggcaaggacctgcc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatagaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
cacagaagtggatgctcacagtcagctaatggatggatcataagggctcc
caaatggaggagctagagaagtagccaaaggagctaaaagggatctgcaa
ccctattaggtggaacaacattatggagcttaacagtaccccggagctct
ttgacctccttagctgcatatataatcaaagatggcttgttcggcccatc
actgaggaggagtcccattggacctgcacctttaatggcctaagttacaa
ggtaatacaaggtcaaatagggaaaatgtggtggtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_22696455_22697547
seq2: B6Ng01-241K17.b_46_1137

seq1  GAATTCATGAGGTAGCCCAAGCTGGCCTAGAACTCATGAGGTAGCCCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAGGTAGCCCAAGCTGGCCTAGAACTCATGAGGTAGCCCAGG  50

seq1  TTGGTCAAGAACTCAAAGTCCTTCTGCCTCGGCCTTCAGATGCTGAGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCAAGAACTCAAAGTCCTTCTGCCTCGGCCTTCAGATGCTGAGTCT  100

seq1  GCAGGTGTCCATTATGACGCCTCACCATTCTTTTTAATTATGATTTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTGTCCATTATGACGCCTCACCATTCTTTTTAATTATGATTTTTAA  150

seq1  ATTTGTAGTAGTTCACATAGTTTCTAAATTTATGACTTATGAATTTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTAGTAGTTCACATAGTTTCTAAATTTATGACTTATGAATTTGGTG  200

seq1  TTTCTGGAATTCTACATTTATACTTTTGGGCCAATTGACCACAGGTTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGAATTCTACATTTATACTTTTGGGCCAATTGACCACAGGTTACT  250

seq1  GAATCCATGGAAAATGAGGCTGTAAATCACAGGCATTGCTTCACTGGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCATGGAAAATGAGGCTGTAAATCACAGGCATTGCTTCACTGGGCT  300

seq1  TAGCTATGTGTGGGAGGGACTCTGTGAGATATCTGGGGATGTTGGTAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTATGTGTGGGAGGGACTCTGTGAGATATCTGGGGATGTTGGTAGAG  350

seq1  GATTGTGAGGCTAAGGCATAGAGAAAGAGCTAGAGACATAACTGAAGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTGAGGCTAAGGCATAGAGAAAGAGCTAGAGACATAACTGAAGCTC  400

seq1  ACCGTAAGGTGGAAAGATACCAAGAGGGTATCATACAGTGTGCGTCACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTAAGGTGGAAAGATACCAAGAGGGTATCATACAGTGTGCGTCACAA  450

seq1  GATTGCTGATGTATTGGCTTCCCATCACTACAATAGGATGCCTGATACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCTGATGTATTGGCTTCCCATCACTACAATAGGATGCCTGATACAA  500

seq1  GCAACTTATGAAGCAAAGAGGTTTATTTTGGCTAACGGTTCTGAGTTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTTATGAAGCAAAGAGGTTTATTTTGGCTAACGGTTCTGAGTTCAA  550

seq1  GCCAAGATCAGGTAGTTACGCTTGTTTAGGCCTCCAGAAACATTTACACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGATCAGGTAGTTACGCTTGTTTAGGCCTCCAGAAACATTTACACC  600

seq1  ACATGGTAGGAATGCCTGTATGATGGAGCGCTCAGTCTAAACCAGAAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTAGGAATGCCTGTATGATGGAGCGCTCAGTCTAAACCAGAAGCC  650

seq1  AGAGGCTATAATTCCCTGCAGGACCTTAAGGCCTTCCAGAGGCCAACTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCTATAATTCCCTGCAGGACCTTAAGGCCTTCCAGAGGCCAACTGC  700

seq1  TACAAAGTCCACAGGTTCTGTCTTTTTCTTTTTGAGTAGAATTTAAGACG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGTCCACAGGTTCTGTCTTTTTCTTTTTGAGTAGAATTTAAGACG  750

seq1  GAGTTTCATGTACCCCATGCTTGTCTCAGATTTACTGTTCAGCCAGGGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTCATGTACCCCATGCTTGTCTCAGATTTACTGTTCAGCCAGGGAC  800

seq1  CTTAAAATCCTGATATTCCTGTCCCAGGTGCTGGGACTGTAAACATGTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAATCCTGATATTCCTGTCCCAGGTGCTGGGACTGTAAACATGTCA  850

seq1  CCACTCTTGGCCAACAGGGGCTTTGCTACCAACAGCCCATGGAACAAGCC  900
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCACTCTTGGCCAACAAGGGCTTTGCTACCAACAGCCCATGGAACAAGCC  900

seq1  TTTATCTATGGATCTTTGGAAGACAACACCCAGATTC-ACATC-ATAGTG  948
      |||||||||||||||||||||||| |||||||||||| ||||| ||||||
seq2  TTTATCTATGGATCTTTGGAAGAC-ACACCCAGATTCAACATCAATAGTG  949

seq1  GTGGCTTAATACAATTTCCTAGTCCCTCTTGACAACTTACTTTCAAAAAA  998
         |||  |||||| ||||||||||||||||||||||||| |||||||||
seq2  --TGCT--ATACAA-TTCCTAGTCCCTCTTGACAACTTAC-TTCAAAAAA  993

seq1  TAAACTTCACTTTAGTCA-CAGGATATTTACACAGA-ACACTC-TTCTAG  1045
      ||||| |||| ||||||| ||| |||||||| |||| |||||| ||||||
seq2  TAAAC-TCAC-TTAGTCACCAGAATATTTACCCAGATACACTCTTTCTAG  1041

seq1  -CTTGTGAAAATTAATGATC---TTACATTTTTTCTCTTGCAAAGACCTG  1091
       |||||  ||| ||||||||   | ||||||| || || |||| ||||||
seq2  CCTTGTTGAAAATAATGATCTCTTAACATTTTCTC-CTGGCAAGGACCTG  1090

seq1  CC  1093
      ||
seq2  CC  1092