BAC Information

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BAC

Clone NameB6Ng01-241O10
Chromosome16 (Build37)
Map Location 59,611,365 - 59,612,477
singlet/doubletsinglet
Overlap genenone
Upstream geneGm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195, Olfr196, Olfr197, Olfr198, Olfr199, Olfr200-ps1, Olfr201, Olfr202, Olfr203, Olfr204, Olfr205, GA_x5J8B7U0478-6-340, Olfr206, Olfr207, Gabrr3, LOC100043803, Mina, BC043118, LOC672884
Downstream geneArl6, Epha6, LOC100043804, EG668168
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241O10.bB6Ng01-241O10.g
ACCGA051697GA051698
length1531,123
definitionB6Ng01-241O10.b B6Ng01-241O10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtgctcaagctaccaagccctgggtttatttttacctaggttt
agaagactttagatagttgcttgtatttctctaggagttttggtctattt
atattgtttgtcttgccagggtcaaaaagtgggagtgggtgggtagggga
gtg
gaattcagttccaggaatccacgtgatagaaggacagaaccaactcctga
aaattgtcatcttactccacatagcatttcctccacagaaaaacaaaaac
aaacaaacaaacaaacaaacaaaacgtgttgtggtggtttgaatatgctt
ggcccatggaaagtagccattgttagaagtgtgccaccgtgggagtggac
tttttgagagcctcctcctagcttgatggtggaagatggcatctcttcct
ggctgcttttgaatcaagatgtagaactcagcttcttctccaccacgttt
gcctgcatgttggcatgctttccaccaaagatgataatggagtgaacctc
tgaaattataaactagcctcaattacatgttgtcctttgtaagagttacc
ttggtcatggtgtctcttcatagcaatagaaaccctaactaaggcacacg
tttaaaaaatatatcatttctatctatatttgaggcaactctagactgat
gacatcctgaacgcatactaataaaagaagcttatggcatgctatcaaaa
tagacacaccactaaccactacaatattctgatgatctttagttttgcaa
atgtccattaattggtgtttctagactttgagaaattggattatatatct
ttgactgctatttttatgaaatctgtaaagacatctacctccaatggata
catgtaccaatgtgtctgcattactcaccttttgccttgttatttttgtg
actaagaatgtttaagatgctatataattatagcttttaattcaaatgca
atgttttcagaactggcatcactgttgtgagaatagtttcagtgtctatt
taaaaaggaagtatgaacttgagtttacaatttataatggtatttcttta
ggttgtcagaaggttacaatatgttgtgttcctgagatatgtctaaaatt
ctgaagaacattcaccatagcagttttattaaacagtttagcctgaggta
gtggaaatctgctgtactgactaccagaagactcctttaagcagtgattg
gaactggaggatacaccccttgaggcggtgttgcacccaggtttctcttc
ttcctttgccttcttagcctgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_59611365_59612477
seq2: B6Ng01-241O10.g_67_1189

seq1  GAATTCAGTTCCAGGAATCCACGTGATAGAAGGACAGAACCAACTCCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCCAGGAATCCACGTGATAGAAGGACAGAACCAACTCCTGA  50

seq1  AAATTGTCATCTTACTCCACATAGCATTTCCTCCACAGAAAAACAAAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTCATCTTACTCCACATAGCATTTCCTCCACAGAAAAACAAAAAC  100

seq1  AAACAAACAAACAAACAAACAAAACGTGTTGTGGTGGTTTGAATATGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACAAACAAACAAACAAAACGTGTTGTGGTGGTTTGAATATGCTT  150

seq1  GGCCCATGGAAAGTAGCCATTGTTAGAAGTGTGCCACCGTGGGAGTGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCATGGAAAGTAGCCATTGTTAGAAGTGTGCCACCGTGGGAGTGGAC  200

seq1  TTTTTGAGAGCCTCCTCCTAGCTTGATGGTGGAAGATGGCATCTCTTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGAGCCTCCTCCTAGCTTGATGGTGGAAGATGGCATCTCTTCCT  250

seq1  GGCTGCTTTTGAATCAAGATGTAGAACTCAGCTTCTTCTCCACCACGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCTTTTGAATCAAGATGTAGAACTCAGCTTCTTCTCCACCACGTTT  300

seq1  GCCTGCATGTTGGCATGCTTTCCACCAAAGATGATAATGGAGTGAACCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCATGTTGGCATGCTTTCCACCAAAGATGATAATGGAGTGAACCTC  350

seq1  TGAAATTATAAACTAGCCTCAATTACATGTTGTCCTTTGTAAGAGTTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTATAAACTAGCCTCAATTACATGTTGTCCTTTGTAAGAGTTACC  400

seq1  TTGGTCATGGTGTCTCTTCATAGCAATAGAAACCCTAACTAAGGCACACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCATGGTGTCTCTTCATAGCAATAGAAACCCTAACTAAGGCACACG  450

seq1  TTTAAAAAATATATCATTTCTATCTATATTTGAGGCAACTCTAGACTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAATATATCATTTCTATCTATATTTGAGGCAACTCTAGACTGAT  500

seq1  GACATCCTGAACGCATACTAATAAAAGAAGCTTATGGCATGCTATCAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCCTGAACGCATACTAATAAAAGAAGCTTATGGCATGCTATCAAAA  550

seq1  TAGACACACCACTAACCACTACAATATTCTGATGATCTTTAGTTTTGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACACCACTAACCACTACAATATTCTGATGATCTTTAGTTTTGCAA  600

seq1  ATGTCCATTAATTGGTGTTTCTAGACTTTGAGAAATTGGATTATATATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCATTAATTGGTGTTTCTAGACTTTGAGAAATTGGATTATATATCT  650

seq1  TTGACTGCTATTTTTATGAAATCTGTAAAGACATCTACCTCCAATGGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTGCTATTTTTATGAAATCTGTAAAGACATCTACCTCCAATGGATA  700

seq1  CATGTACCAATGTGTCTGCATTACTCACCTTTTGCCTTGTTATTTTTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTACCAATGTGTCTGCATTACTCACCTTTTGCCTTGTTATTTTTGTG  750

seq1  ACTAAGAATGTTTAAGATGCTATATAATTATAGCTTTTAATTCAAATGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGAATGTTTAAGATGCTATATAATTATAGCTTTTAATTCAAATGCA  800

seq1  ATGTTTTCAGAACTGGCATCACTGTTGTGAGAATAGTTTCAGTGTCTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTCAGAACTGGCATCACTGTTGTGAGAATAGTTTCAGTGTCTATT  850

seq1  TAAAAAGGAAGTATGAACTTGAGTTTACAATTATAAATGGTATTTCTTTA  900
      ||||||||||||||||||||||||||||||||   |||||||||||||||
seq2  TAAAAAGGAAGTATGAACTTGAGTTTACAATTTATAATGGTATTTCTTTA  900

seq1  GGTTGTCAGAA-GTTAC-ATATGTTGTGTTCCTGAGATATGTCTAAAATT  948
      ||||||||||| ||||| ||||||||||||||||||||||||||||||||
seq2  GGTTGTCAGAAGGTTACAATATGTTGTGTTCCTGAGATATGTCTAAAATT  950

seq1  CTGAAGAACATTCA-CATAGCAGTTT--ATAAACAG-TTAG-CTGAGGTA  993
      |||||||||||||| |||||||||||   ||||||| |||| ||||||||
seq2  CTGAAGAACATTCACCATAGCAGTTTTATTAAACAGTTTAGCCTGAGGTA  1000

seq1  GTGG-AATCTGCTGTAACTGACTACCCAGAAGACTCC-TTAAGCAGTGAA  1041
      |||| |||||||||| |||||||| |||||||||||| ||||||||||| 
seq2  GTGGAAATCTGCTGT-ACTGACTA-CCAGAAGACTCCTTTAAGCAGTGAT  1048

seq1  TTGAACT-GAGGATACACCCC-TGAAGCGGTGTTGCACCCAGGTTTCTCT  1089
      | ||||| ||||||||||||| ||| ||||||||||||||||||||||||
seq2  TGGAACTGGAGGATACACCCCTTGAGGCGGTGTTGCACCCAGGTTTCTCT  1098

seq1  TCTTTCTTTGCTTCCTTAG-CTGTA  1113
      |||| |||||| | ||||| |||||
seq2  TCTTCCTTTGCCTTCTTAGCCTGTA  1123