BAC Information

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BAC

Clone NameB6Ng01-242B07
Chromosome16 (Build37)
Map Location 46,528,298 - 46,529,445
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC628681, Slc9a10, Gcet2, BC016579, Tmprss7, Tagln3, Abhd10, Phldb2, EG667418, Plcxd2, 4930546O09Rik, Cd96, AL024110, Pvrl3
Downstream geneLOC628757
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242B07.bB6Ng01-242B07.g
ACCGA051826GA051827
length1,1541,193
definitionB6Ng01-242B07.b B6Ng01-242B07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttagaaataactgtgggaaagttggcaggggggcattagtttt
gtgcaaaagaaccattaagaaaaaggttaaaattaatttaacatttattt
catttaaatggggtatagctcacagagaactgataatatgtgtcattggt
ttcaaagatttttataagtgtgaggaattgctttggctgttgtcattttc
attagtggaatgctttgttctaaggaggcataaaataacacttaaaatgt
ctaaaaacttttccctgtgtgattctatcaataaatcatacagacaccat
caatacatttcagtactactaggaaacattcatttctctttcattttaat
gttttaaatatttcatatttgagccttttgttgtcttttaagatcagatt
gtggcctcctaacagtctcgtttgatgtaggtatggcccaagatatgctc
tatctatgtatactcagtacatatagtgccttctgtaaatggtgttttaa
atcactgcaaataaggtagaggggagataaagggttttcatatcatattt
cagaatataagcaactcttctctgaatatgtatccttaactgctagtaag
acctgactgctatttacataatagaaaagatacatttgggcttctgcgat
tccaacaggcatctttctccatgactcatgcaacttcagctactacccca
agagctacgtcagagataagaaacaaaggccattttcttccaggaacaaa
gcaggactttctttgtttcagtatatgattttttaaattttattttatta
gttagttagttagttgtctttcacaattctgagaaccttattgatgtggg
tcagttctttaatcctggctctaaagacacacacagggtcggagattaga
gacaaagacacacaaatagagaaatagagacaggggagagaagtatccta
tttcaatagagaaaaacagcactgaagagaaattattgactggtcgttca
ggagcgggccgtaagattaaaagaagaagactgagcttctgtggcaattc
ccctttgaataagaacgtgcgaatctggatgctatgggtgaagaggttgg
attgacttgcctacatgcctctcctgtagaaagaacaattaggaatcata
gtca
gaattcaagacccatacctaaacactggtacagagagagacatgttgttc
aatggattagaattgaagacccagaaataaaaccacacacttaaagtcac
ttgatctttgacagagacaccaaaaatatacaatggaaaaaagaaagcat
cttttgtaaatggtgctggtctaactggctgcctgtatgtagaagaatga
aaatagacccataaatgtcacaaagcttaagtccaagtggatcaaggacc
tcaacataaaaccagatacactgaatctaatagaaaagaaaatgggaaag
agccttgaattcattgacacagggggaaattctaaacagaatttcctaaa
attttggaatttcctaaacaaaattccaatggctcatgctctaagatcaa
gaactaataaatgagacctcatgaaactggaaagcttctgtaaggcaaag
gaaatagtcaataagacaaatcagcaacctacacattgggaaaaaatatc
ttcactaatctcacatccaataaagggctaatatccaaaatatatataga
actctagaagttaatcaccaaaaaccaagacaacccaatcaaaaaatggg
gtatagaactaaactgagaattcacaactgaagagtcttgaatagctgag
aagcacctaaagaaatgttcaaagtccttatcaatcagagaaatgcaaat
caaaacaactctgagattccaccttaaaccagtcagaatggctaagatca
aaacctcaggtgacaacacatgttggagaggatgtggagaaagagtaacg
ctcctccattgctggtgggattgcaaactggttcaaccactctggaattc
aatctggcgattcctcagaaaatttggaaatagatctacctgaagacgca
gctacaccactcttgggaataaaacccaaaaagtggccctaccatgccac
tgtgttccactatgttcatagtgaccttatttgtgaatagccagaagctg
aaaaccaacctagatgtcccatgacagaagaatggaatacagaaaaacgt
gtcattacactatggaatacctactcatctataggaggagaacatctaag
ttttgcggcatgaactgaaatagaaactaaatctgaatgagttactcgac
cgaaagtacatgcatggatattaccctcactcgtagggtaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_46528298_46529445
seq2: B6Ng01-242B07.b_45_1198 (reverse)

seq1  TGACTATGATTCCTAATTGTTCTTTCTACAGGAGAAGGCATTGTA-GCAA  49
      |||||||||||||||||||||||||||||||||| ||||| |||| ||||
seq2  TGACTATGATTCCTAATTGTTCTTTCTACAGGAG-AGGCA-TGTAGGCAA  48

seq1  GTC-ATCCAACCTC-TCACCCATAGCATCCAGAATTCGCACGTTCTTA-T  96
      ||| |||||||||| ||||||||||||||||| ||||||||||||||| |
seq2  GTCAATCCAACCTCTTCACCCATAGCATCCAG-ATTCGCACGTTCTTATT  97

seq1  CAAA-GGGAATTGCCACAGAGGCTCAGTCTTCT--CTATAATCTTACGG-  142
      |||| ||||||||||||||| ||||||||||||   | ||||||||||| 
seq2  CAAAGGGGAATTGCCACAGAAGCTCAGTCTTCTTCTTTTAATCTTACGGC  147

seq1  CCGCTCCTGAACGACCAGTC-ATAATTTCTCTTCAGTGCTGTTTTTCTCT  191
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CCGCTCCTGAACGACCAGTCAATAATTTCTCTTCAGTGCTGTTTTTCTCT  197

seq1  ATTGAAATAGGATACTTCTCTCCCCTGTCTCTATTTCTCTATTTGTGTGT  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAATAGGATACTTCTCTCCCCTGTCTCTATTTCTCTATTTGTGTGT  247

seq1  CTTTGTCTCTAATCTCCGACCCTGTGTGTGTCTTTAGAGCCAGGATTAAA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCTCTAATCTCCGACCCTGTGTGTGTCTTTAGAGCCAGGATTAAA  297

seq1  GAACTGACCCACATCAATAAGGTTCTCAGAATTGTGAAAGACAACTAACT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGACCCACATCAATAAGGTTCTCAGAATTGTGAAAGACAACTAACT  347

seq1  AACTAACTAATAAAATAAAATTTAAAAAATCATATACTGAAACAAAGAAA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAACTAATAAAATAAAATTTAAAAAATCATATACTGAAACAAAGAAA  397

seq1  GTCCTGCTTTGTTCCTGGAAGAAAATGGCCTTTGTTTCTTATCTCTGACG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGCTTTGTTCCTGGAAGAAAATGGCCTTTGTTTCTTATCTCTGACG  447

seq1  TAGCTCTTGGGGTAGTAGCTGAAGTTGCATGAGTCATGGAGAAAGATGCC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCTTGGGGTAGTAGCTGAAGTTGCATGAGTCATGGAGAAAGATGCC  497

seq1  TGTTGGAATCGCAGAAGCCCAAATGTATCTTTTCTATTATGTAAATAGCA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGAATCGCAGAAGCCCAAATGTATCTTTTCTATTATGTAAATAGCA  547

seq1  GTCAGGTCTTACTAGCAGTTAAGGATACATATTCAGAGAAGAGTTGCTTA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGTCTTACTAGCAGTTAAGGATACATATTCAGAGAAGAGTTGCTTA  597

seq1  TATTCTGAAATATGATATGAAAACCCTTTATCTCCCCTCTACCTTATTTG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGAAATATGATATGAAAACCCTTTATCTCCCCTCTACCTTATTTG  647

seq1  CAGTGATTTAAAACACCATTTACAGAAGGCACTATATGTACTGAGTATAC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATTTAAAACACCATTTACAGAAGGCACTATATGTACTGAGTATAC  697

seq1  ATAGATAGAGCATATCTTGGGCCATACCTACATCAAACGAGACTGTTAGG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAGAGCATATCTTGGGCCATACCTACATCAAACGAGACTGTTAGG  747

seq1  AGGCCACAATCTGATCTTAAAAGACAACAAAAGGCTCAAATATGAAATAT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCACAATCTGATCTTAAAAGACAACAAAAGGCTCAAATATGAAATAT  797

seq1  TTAAAACATTAAAATGAAAGAGAAATGAATGTTTCCTAGTAGTACTGAAA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACATTAAAATGAAAGAGAAATGAATGTTTCCTAGTAGTACTGAAA  847

seq1  TGTATTGATGGTGTCTGTATGATTTATTGATAGAATCACACAGGGAAAAG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTGATGGTGTCTGTATGATTTATTGATAGAATCACACAGGGAAAAG  897

seq1  TTTTTAGACATTTTAAGTGTTATTTTATGCCTCCTTAGAACAAAGCATTC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGACATTTTAAGTGTTATTTTATGCCTCCTTAGAACAAAGCATTC  947

seq1  CACTAATGAAAATGACAACAGCCAAAGCAATTCCTCACACTTATAAAAAT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATGAAAATGACAACAGCCAAAGCAATTCCTCACACTTATAAAAAT  997

seq1  CTTTGAAACCAATGACACATATTATCAGTTCTCTGTGAGCTATACCCCAT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAACCAATGACACATATTATCAGTTCTCTGTGAGCTATACCCCAT  1047

seq1  TTAAATGAAATAAATGTTAAATTAATTTTAACCTTTTTCTTAATGGTTCT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGAAATAAATGTTAAATTAATTTTAACCTTTTTCTTAATGGTTCT  1097

seq1  TTTGCACAAAACTAATGCCCCCCTGCCAACTTTCCCACAGTTATTTCTAA  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCACAAAACTAATGCCCCCCTGCCAACTTTCCCACAGTTATTTCTAA  1147

seq1  AGAATTC  1148
      |||||||
seq2  AGAATTC  1154