BAC Information

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BAC

Clone NameB6Ng01-243K16
Chromosome16 (Build37)
Map Location 8,455,980 - 8,576,688
singlet/doubletdoublet
Overlap geneBC024814, Abat
Upstream gene4930511J11Rik
Downstream geneLOC665207, Tmem186, Pmm2, Carhsp1, EG436336, Usp7, LOC665231, 1810013L24Rik, LOC100043106
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243K16.bB6Ng01-243K16.g
ACCGA052988GA052989
length1,1791,151
definitionB6Ng01-243K16.b B6Ng01-243K16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,575,940 - 8,576,688)(8,455,980 - 8,457,143)
sequence
gaattcctggaaaaggcaactcagggaggagcaggaggaggggttacagt
ggtgggggaggttcaggggcaggactgtcctcaggccagaagggatggat
gctgctgctgttcagctggatttctccttctcctccttttgtctgggacc
ccagtgcttggaatggccccgctcacaggcaaagtgggtcttttggaaac
ttacctcagcctaatctggaaactccctcacagacatgtctagtgtttat
ctcccatgtgattctagatcctgccacgttggcagtcaatattaaccatc
gtggggcctcggagacggctcaggtgtttgaattcttgccatgcaagcgt
ggggatcttagctccatccttagctcccacattaaagacaaaacaaatgg
gcgaggtggcctgttccagtcggggaggtggaagcatgaggctccccagg
gcatgctggccagccctagctggtaggtctagctgataggtgagctccag
gtccatttagagaccctgactcaaaagataaacagggcaggaactgagga
gagtgcctgacattgacctctggtctccacacacatatataataacatat
atacatacctatacacatgccacattaactaccatactatttcaaggagg
aggagggaggaaaagaactctctaggagaaggtaaatttatagactaaag
aggtcctcattgtacagattcttttgttgttgccaaaaagttctggcctc
aagtcactggttggaatcccaattggcattttgcagagtaataaatttac
tgaagagctaagttcccagacgagtcccactggcatccttgttcagcatg
tggtcagccacacaaagatggcccctagcccaagcctgcctcatcccaga
gggacagacagctgtaagcatgccaggacagtgactcctacgagtcccct
tgggtgggtgttgccatcttaaccttcctggcatgctcgcagataattag
tgtctctcactgagccatgctcttgtagctgcatcaagtagaggatcatg
ggacatatgtgaggctgcacttacccttataatatataaattggatatgt
gcattactatcccatcgggttacctatctgctgcctatttttccatcatc
aatcacgttaatcttcaatcatctatcaa

gaattcagcagcttgggaggcttggggaagggaggggagagacagagcac
gcaagcatgtgaagttgagagggaagtgtggaggagcaggagaggaatca
gatgggagagaatgggagacagacttgatcaaagcgcattccatgcacat
atgaaattctcaaacaataaagaataaaaaagagaaggagatgagaaagc
atgtccaaggagatcccttgccaccatcatccaggggccacggatgcttg
tggtccactgtgctgccaggtaactggatatcaggctcacactgcacata
gaatctcaagggaccagttaaaggtgggcatgtggctcaggtgatggcat
cgtggcttgggaagctggtgggccaagctgaaaaggcttttcctgaggtg
atgactcgtcagctacggtgtcctaattggaagcattaggaccagagttt
ggagccccaggatccacatcagtgctggtgggcatgaagacctgcctcta
agtctaaagaagacaggatccctgagcaagctgggtaaggagaccaatgt
gcccaaattctctggggctgactgggagacgttgcccagggcacaaagta
gaaggatgactgagaattatcagcatcaacctcaggcctctacatactca
catacatgtgcccacacacatgtgaagcatgcatattcacatatacacag
cacacatggaaacaaaaaaaaaatcaatgaatatttttgtcctgtgacat
aagtaagggagtctggccctccctgaaacaggccttgcaagtataagagc
cctaaatggagagggttacaggcaggacaaaggtccagaggcaggaggat
gactgttagcttgtgtaagttatattctaactagtccattctgtggattt
tctatatgtcccactcccagcatgttctgggtactttgcaagcaccagca
caaactacaaagaacataaagtctctttgcctaatctgacaatgtaacca
gcctgacccactactctctcaaagttcaaatggacaacttgcacctccct
tcaggattgacctggcagtgttaagaattgtgctggtctgtgtcactcca
tcgcctccagtagagttacagtaattgaacacactatgtgtagtaccttt
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_8575940_8576688
seq2: B6Ng01-243K16.b_636_1223 (reverse)

seq1  TTGATAGATGATAGGCTATAGATAGATAAGTAGAACGTAGAAGATAGATA  50
                                                        
seq2  --------------------------------------------------  0

seq1  GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGAGAAAC  100
                                                        
seq2  --------------------------------------------------  0

seq1  AGACAAACAAATGGTAGATAGGTAAATAGATGATACATAGATCAGTAAAT  150
                                                        
seq2  --------------------------------------------------  0

seq1  GATAGAGAAGTAGATGACTGATAGATGATAGAAGA-TAAAGTGATAGATG  199
                        ||||||||||| ||||| ||| ||||| ||||
seq2  -----------------TTGATAGATGATTGAAGATTAACGTGATTGATG  33

seq1  ATAG-AAAATAGATAGCAGATAGGTAA-CCGAT-GGATAGTAAATGCACA  246
      || | |||||||  ||||||||||||| ||||| ||||||| ||||||||
seq2  ATGGAAAAATAGGCAGCAGATAGGTAACCCGATGGGATAGT-AATGCACA  82

seq1  TATCC-ATTTATATA-TATAAGGGTAAGTGCAGCCTCACATATGTCCCAT  294
      ||||| ||||||||| ||||||||||||||||||||||||||||||||||
seq2  TATCCAATTTATATATTATAAGGGTAAGTGCAGCCTCACATATGTCCCAT  132

seq1  GATCCTCTACTTTGATGCAGCTACAAGAGCATGGCTCAGTGAGAGACACT  344
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GATCCTCTAC-TTGATGCAGCTACAAGAGCATGGCTCAGTGAGAGACACT  181

seq1  AATTATCTGCGAGCATGCCAGGAAGGTTAAGATGGCAACACC--ACCAAG  392
      ||||||||||||||||||||||||||||||||||||||||||   |||||
seq2  AATTATCTGCGAGCATGCCAGGAAGGTTAAGATGGCAACACCCACCCAAG  231

seq1  GGGACTCGTAGGAGTCACTGTCCTGGCATGCTTACAGCTGTCTGTCCCTC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTCGTAGGAGTCACTGTCCTGGCATGCTTACAGCTGTCTGTCCCTC  281

seq1  TGGGATGAGGCAGGCTTGGGCTAGGGGCCATCTTTGTGTGGCTGACCACA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATGAGGCAGGCTTGGGCTAGGGGCCATCTTTGTGTGGCTGACCACA  331

seq1  TGCTGAACAAGGATGCCAGTGGGACTCGTCTGGGAACTTAGCTCTTCAGT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAACAAGGATGCCAGTGGGACTCGTCTGGGAACTTAGCTCTTCAGT  381

seq1  AAATTTATTACTCTGCAAAATGCCAATTGGGATTCCAACCAGTGACTTGA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTATTACTCTGCAAAATGCCAATTGGGATTCCAACCAGTGACTTGA  431

seq1  GGCCAGAACTTTTTGGCAACAACAAAAGAATCTGTACAATGAGGACCTCT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGAACTTTTTGGCAACAACAAAAGAATCTGTACAATGAGGACCTCT  481

seq1  TTAGTCTATAAATTTACCTTCTCCTAGAGAGTTCTTTTCCTCCCTCCTCC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCTATAAATTTACCTTCTCCTAGAGAGTTCTTTTCCTCCCTCCTCC  531

seq1  TCCTTGAAATAGTATGGTAGTTAATGTGGCATGTGTATAGGTATGTATAT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGAAATAGTATGGTAGTTAATGTGGCATGTGTATAGGTATGTATAT  581

seq1  ATGTTAT  749
      |||||||
seq2  ATGTTAT  588


seq1: chr16_8455980_8457143
seq2: B6Ng01-243K16.g_65_1215

seq1  GAATTCAGCAGCTTGGGAGGCTTGGGGAAGGGAGGGGAGAGACAGAGCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAGCTTGGGAGGCTTGGGGAAGGGAGGGGAGAGACAGAGCAC  50

seq1  GCAAGCATGTGAAGTTGAGAGGGAAGTGTGGAGGAGCAGGAGAGGAATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCATGTGAAGTTGAGAGGGAAGTGTGGAGGAGCAGGAGAGGAATCA  100

seq1  GATGGGAGAGAATGGGAGACAGACTTGATCAAAGCGCATTCCATGCACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGAGAGAATGGGAGACAGACTTGATCAAAGCGCATTCCATGCACAT  150

seq1  ATGAAATTCTCAAACAATAAAGAATAAAAAAGAGAAGGAGATGAGAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATTCTCAAACAATAAAGAATAAAAAAGAGAAGGAGATGAGAAAGC  200

seq1  ATGTCCAAGGAGATCCCTTGCCACCATCATCCAGGGGCCACGGATGCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCAAGGAGATCCCTTGCCACCATCATCCAGGGGCCACGGATGCTTG  250

seq1  TGGTCCACTGTGCTGCCAGGTAACTGGATATCAGGCTCACACTGCACATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCACTGTGCTGCCAGGTAACTGGATATCAGGCTCACACTGCACATA  300

seq1  GAATCTCAAGGGACCAGTTAAAGGTGGGCATGTGGCTCAGGTGATGGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTCAAGGGACCAGTTAAAGGTGGGCATGTGGCTCAGGTGATGGCAT  350

seq1  CGTGGCTTGGGAAGCTGGTGGGCCAAGCTGAAAAGGCTTTTCCTGAGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGCTTGGGAAGCTGGTGGGCCAAGCTGAAAAGGCTTTTCCTGAGGTG  400

seq1  ATGACTCGTCAGCTACGGTGTCCTAATTGGAAGCATTAGGACCAGAGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTCGTCAGCTACGGTGTCCTAATTGGAAGCATTAGGACCAGAGTTT  450

seq1  GGAGCCCCAGGATCCACATCAGTGCTGGTGGGCATGAAGACCTGCCTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCCCAGGATCCACATCAGTGCTGGTGGGCATGAAGACCTGCCTCTA  500

seq1  AGTCTAAAGAAGACAGGATCCCTGAGCAAGCTGGGTAAGGAGACCAATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAAAGAAGACAGGATCCCTGAGCAAGCTGGGTAAGGAGACCAATGT  550

seq1  GCCCAAATTCTCTGGGGCTGACTGGGAGACGTTGCCCAGGGCACAAAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAATTCTCTGGGGCTGACTGGGAGACGTTGCCCAGGGCACAAAGTA  600

seq1  GAAGGATGACTGAGAATTATCAGCATCAACCTCAGGCCTCTACATACTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGATGACTGAGAATTATCAGCATCAACCTCAGGCCTCTACATACTCA  650

seq1  CATACATGTGCCCACACACATGTGAAGCATGCATATTCACATATACACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATGTGCCCACACACATGTGAAGCATGCATATTCACATATACACAG  700

seq1  CACACATGGAAACAAAAAAAAAATCAATGAATATTTTTGTCCTGTGACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATGGAAACAAAAAAAAAATCAATGAATATTTTTGTCCTGTGACAT  750

seq1  AAGTAAGGGAGTCTGGCCCTCCCTGAAACAGGCCTTGCAAGTATAAGAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGGGAGTCTGGCCCTCCCTGAAACAGGCCTTGCAAGTATAAGAGC  800

seq1  CCTAAATGGAGAGGGTTACAGGCAGGAC-AAGGTCCAGAGGCAGGAGGAT  849
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CCTAAATGGAGAGGGTTACAGGCAGGACAAAGGTCCAGAGGCAGGAGGAT  850

seq1  GACTGTTAGCTTGTGTAAGTTATATTCTAACTAGTCCATTCTGTGGGATT  899
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GACTGTTAGCTTGTGTAAGTTATATTCTAACTAGTCCATTCTGT-GGATT  899

seq1  TTCTATATGTCCCACTCCCAGCAATGTTCTGGGTACTTTGCAAGCACCAG  949
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTCTATATGTCCCACTCCCAGC-ATGTTCTGGGTACTTTGCAAGCACCAG  948

seq1  CACAAACTACAAAGAACATAAAGTCTCTTTGCCTAATCTGACAATGTTAA  999
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CACAAACTACAAAGAACATAAAGTCTCTTTGCCTAATCTGACAATG-TAA  997

seq1  CCAGCCTTGGACCCACTACTCTCTCAAAAGTTTCAAATGGGACAACTTTG  1049
      |||||||  |||||||||||||||||||   ||||||| ||||||| |||
seq2  CCAGCCT--GACCCACTACTCTCTCAAA--GTTCAAAT-GGACAAC-TTG  1041

seq1  CA-CTCCCTTCAAGGAATGAGCTGGGCAGTGTTTAGAATGTGGCTGGGTC  1098
      || |||||||| |||| ||| || ||||||||| |||||   ||| ||||
seq2  CACCTCCCTTC-AGGATTGACCT-GGCAGTGTTAAGAATTGTGCT-GGTC  1088

seq1  TGTGTCACTCCATCGCTCACAGGTAGGGAGTTATAGTGATTTGAACACAT  1148
      |||||||||||||||| | |  |||  |||||| ||| | ||||||||| 
seq2  TGTGTCACTCCATCGC-CTCCAGTA--GAGTTACAGT-AATTGAACACAC  1134

seq1  TATGTGTAGTA-CTTTG  1164
      ||||||||||| |||||
seq2  TATGTGTAGTACCTTTG  1151


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