BAC Information

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BAC

Clone NameB6Ng01-244E15
Chromosome16 (Build37)
Map Location 28,818,773 - 28,819,904
singlet/doubletsinglet
Overlap genenone
Upstream geneFgf12
Downstream gene1600021P15Rik, EG666717, Hrasls, Atp13a5, Atp13a4, Opa1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244E15.bB6Ng01-244E15.g
ACCGA053460GA053461
length7181,120
definitionB6Ng01-244E15.b B6Ng01-244E15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactctctgtctcttgttgagccagcatctgctcaggactcaccg
aagaggctgggctctgctagcatggggcacaggaattcctgccaaatgac
ttgcttagaaactgatgaagacccaagttgagctcagggaaccaaagccc
tccacaattaggctaaattatgtttctggtttagagagatctaccgtggt
ttcaatttttcattgaaattctccaaaacagggtgtactcactattaagc
agaactctcagacccaatcctgactcagatccttgggaaattagcattct
gtatgtcccaatttgcttgtctctaagttctctctctctctctctctctc
tctctctctctctctctctctctctctctctctcgcgctctctcacacgg
gttggatagtgaatttggactttgtagatgtgctggtacatactaggtca
tattcgccgtaacatgatgacttagctgcccaagaagacctatttggttg
tgattatgactggttgggaaagaggtagtgatggggctattgggtattct
acctctcggtgatatgcttctgaactagggtaattgattcagtaggtaaa
catagaggacatgatggagccatccttcataggaaacacgaatgaaaaga
acctgaagattccttaagttccttgacttgtgttttccaggcgggcgggg
gatactacatcatgtgac

gaattctcttattaggcacttccttctcctaaggctgactaacaagatcc
agctattaaagtattgaagaccagcaatcaaaaactccctttggctcacc
taattaacatgatcaattaagattaaacgccatatcctagcctgaggttt
cctctttactttataccctgctatttgcctgtggatgggctgtcttcctc
ctctttatccagacgcgatcctcggtgcctccctcccccttcccttgccc
tctgtctttgtcttctactccttgccctttgtccctctagggcaaataca
tttcctatgttctgaaaacttagtcttggaggtcctgaggcaattaggga
aataagaggcaattgggaccagagttcagtcaggctaagactttcttttc
aagatgcagaagccattctcagacttgcctctttctaattcctctgctgt
tcttggtaggtttcctcccaaagccattagcatagaggagaaggtcagaa
tgtgaatatgacccagaggaaggattgtccaggctggactcacgctgtga
ttctgtcagagtcacagggttttgatgggagacattgtccccagaggttt
ccatcacaaggtgaacacatgcgaggtaaagaacaaatttaagtaaatta
tagacacaatctagtcactgtcacatgatcccaaatggcactttcttttt
cttttagaattcccatataaaactaaacaaaactgatgcgtgagttagtc
aaggtcaacgctttagctatctttcaataacttaagagccacaaaacctt
gagttttccagtaaaatacttttgtatgcaataactttttaaatggaaca
aacagctatttgtaaagtacagagattgtcctgtacctgtgacatgagcc
tgattctggagagttctcagaaccatatgccaccatagataaagactgga
gcaatgacttctcattactatgcccatactatgcctatctgaagagaata
ctacatcttcttactctcaactcactagagttcatgctgcttgagtctgt
aattctacccatagactgtttatattatcttctcctgtgtgcaatcttcg
tcaagtaaataggttctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_28818773_28819904
seq2: B6Ng01-244E15.g_67_1186

seq1  GAATTCTCTTATTAGGCACTTCCTTCTCCTAAGGCTGACTAACAAGATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTATTAGGCACTTCCTTCTCCTAAGGCTGACTAACAAGATCC  50

seq1  AGCTATTAAAGTATTGAAGACCAGCAATCAAAAACTCCCTTTGGCTCACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATTAAAGTATTGAAGACCAGCAATCAAAAACTCCCTTTGGCTCACC  100

seq1  TAATTAACATGATCAATTAAGATTAAACGCCATATCCTAGCCTGAGGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAACATGATCAATTAAGATTAAACGCCATATCCTAGCCTGAGGTTT  150

seq1  CCTCTTTACTTTATACCCTGCTATTTGCCTGTGGATGGGCTGTCTTCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTTACTTTATACCCTGCTATTTGCCTGTGGATGGGCTGTCTTCCTC  200

seq1  CTCTTTATCCAGACGCGATCCTCGGTGCCTCCCTCCCCCTTCCCTTGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTATCCAGACGCGATCCTCGGTGCCTCCCTCCCCCTTCCCTTGCCC  250

seq1  TCTGTCTTTGTCTTCTACTCCTTGCCCTTTGTCCCTCTAGGGCAAATACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTTTGTCTTCTACTCCTTGCCCTTTGTCCCTCTAGGGCAAATACA  300

seq1  TTTCCTATGTTCTGAAAACTTAGTCTTGGAGGTCCTGAGGCAATTAGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTATGTTCTGAAAACTTAGTCTTGGAGGTCCTGAGGCAATTAGGGA  350

seq1  AATAAGAGGCAATTGGGACCAGAGTTCAGTCAGGCTAAGACTTTCTTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGAGGCAATTGGGACCAGAGTTCAGTCAGGCTAAGACTTTCTTTTC  400

seq1  AAGATGCAGAAGCCATTCTCAGACTTGCCTCTTTCTAATTCCTCTGCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCAGAAGCCATTCTCAGACTTGCCTCTTTCTAATTCCTCTGCTGT  450

seq1  TCTTGGTAGGTTTCCTCCCAAAGCCATTAGCATAGAGGAGAAGGTCAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTAGGTTTCCTCCCAAAGCCATTAGCATAGAGGAGAAGGTCAGAA  500

seq1  TGTGAATATGACCCAGAGGAAGGATTGTCCAGGCTGGACTCACGCTGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATATGACCCAGAGGAAGGATTGTCCAGGCTGGACTCACGCTGTGA  550

seq1  TTCTGTCAGAGTCACAGGGTTTTGATGGGAGACATTGTCCCCAGAGGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCAGAGTCACAGGGTTTTGATGGGAGACATTGTCCCCAGAGGTTT  600

seq1  CCATCACAAGGTGAACACATGCGAGGTAAAGAACAAATTTAAGTAAATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCACAAGGTGAACACATGCGAGGTAAAGAACAAATTTAAGTAAATTA  650

seq1  TAGACACAATCTAGTCACTGTCACATGATCCCAAATGGCACTTTCTTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACAATCTAGTCACTGTCACATGATCCCAAATGGCACTTTCTTTTT  700

seq1  CTTTTAGAATTCCCATATAAAACTAAACAAAACTGATGCGTGAGTTAGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGAATTCCCATATAAAACTAAACAAAACTGATGCGTGAGTTAGTC  750

seq1  AAGGTCAACGCTTTAGCTATCTTTCAATAACTTAAGAGCCACAAAACCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCAACGCTTTAGCTATCTTTCAATAACTTAAGAGCCACAAAACCTT  800

seq1  GAGTTTTCCAGTAAAATACTTTTGTATGCAATAACTTTTTAAATGGAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTCCAGTAAAATACTTTTGTATGCAATAACTTTTTAAATGGAACA  850

seq1  AACAGCTATTTGTAAAGTACAGAGATTGTCCTGTACCTGTGACAATGAGC  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AACAGCTATTTGTAAAGTACAGAGATTGTCCTGTACCTGTGAC-ATGAGC  899

seq1  CTGATTCTGGAGAGTTCTCAGAACCATATGCCACCATAGAATAAAGACTG  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTGATTCTGGAGAGTTCTCAGAACCATATGCCACCATAG-ATAAAGACTG  948

seq1  GAGCAATGACTTCTCATTACTATGCCCATTACTATGCCCTATCTG-AGAG  999
      |||||||||||||||||||||||||||| ||||||| |||||||| ||||
seq2  GAGCAATGACTTCTCATTACTATGCCCA-TACTATG-CCTATCTGAAGAG  996

seq1  ATACCTACCATCTTCTTTCCTTCTCAACTCACCTAGAGTCCATGCCTGCC  1049
      |   ||| ||||||||| |  |||||||||| ||||||| |||| |||| 
seq2  AATACTA-CATCTTCTTAC--TCTCAACTCA-CTAGAGTTCATG-CTGCT  1041

seq1  TGAGTCTGTAAATTCTACCCATAGACTGTTATTATTTAATCTTCTCCTGT  1099
      ||||||||| |||||||||||||||||||  |||| | ||||||||||||
seq2  TGAGTCTGT-AATTCTACCCATAGACTGT--TTATATTATCTTCTCCTGT  1088

seq1  GTGC-ATCTTCTGTCCAGGTAAATAGTGTCTCTC  1132
      |||| |||||| || || ||||||||  ||||||
seq2  GTGCAATCTTC-GT-CAAGTAAATAGGTTCTCTC  1120


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