BAC Information

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BAC

Clone NameB6Ng01-244F15
Chromosome16 (Build37)
Map Location 89,494,718 - 89,495,688
singlet/doubletsinglet
Overlap genenone
Upstream geneCldn17, Cldn8, Gm312, 2310079G19Rik, 2310002B14Rik, EG665513, 2310061N02Rik, Krtap13-1, Krtap13, 2310034C09Rik, 2310057N15Rik, EG546672, EG433047, 4930553J12Rik, Krtap14, Krtap15, Krtap16-9, Krtap16-1, Krtap16-5, Krtap16-4, Krtap8-2, LOC100040191, AY026312, Krtap16-10, EG621595, LOC100040167, 1110032D16Rik, LOC100040201, Krtap6-1, LOC100040214, Krtap16-8, 1110025L11Rik, LOC100040249, LOC100040267, EG622794, LOC100040281, ENSMUSG00000044227, EG665661, LOC100040288, EG622935, EG622981, EG622998, EG623011, EG623026, LOC100040346, EG623049, LOC100040415, EG640636, LOC640652, LOC640654, LOC100040425, LOC100040374, LOC640656, LOC100040445, LOC100040456, Krtap21-1, Krtap6-2
Downstream gene5430433J05Rik, Tiam1, LOC100040496, LOC640694, LOC100040440, Sod1, Sfrs15, LOC545175, Hunk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244F15.bB6Ng01-244F15.g
ACCGA053508GA053509
length1,250974
definitionB6Ng01-244F15.b B6Ng01-244F15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtaagattgtaaaagctaagtcactcccttacacaggaattta
ccatcattaaggaagaaggaagttccagaccaaaggagaaaccagaatag
atacttagaactatagcagagttacacccatacacacatatttacaatgg
cctaaggggaaggtggactatacaagagactaaaataggaactatggcaa
gggctcgaagcccttgaccctggcttctaagattagtgaatcttaggtgg
agcccttgttgatcccagctgttatcaatatattctatcccaggtggttc
ccgttagaccttttgtgtttgcattcctctgttttatgtaagattccggt
tacctcaattgtaccttgcgaatatgtcacccaacttccttattgtcctc
tgcataaaaagtctgatgctcgattcgaaaattacactcagattccacac
aacctctcctgtgtgtgtctgtttgtcattcatccatgctttgcccaccc
ctgtcgagagacccgttccacgcagacacagggacccagagggtctgcgg
cagcagatctctgtgagtttgaggctagcctggtttatgtagtgagttcc
aggatagccagagtgacattgtgaagctcagtctgggaaaaaaaaataaa
taaaataaaataacctgcccttggttcttgggtgtggggttatctgttcc
caggcatcctgaggtgtaactgcccacagtaggctaaaacactttccatt
gctcctgctcacagagtaaagccatgtggcaagtctttactaggggagaa
gctgacctgacttgcagaaagcagaaaccttcagtaagtgacagctttcc
cgatctcctttcttaggaagggcaatgccaacagtgcaacccttgagctc
tcttatggaaactgccagaagagccttggagggcaaggggagtgggtgtc
ctggcttaacagtttggtggagatagacctggtgatttgcttgtcctcat
gatctagtaatcctctgctttccagagcactgatggtaaagtgttgagaa
atccaagaaatgggttgaagaagcatgatagggtactggacctggaatgg
tgatgccacaaaactggtgggttgggtgtggtagcacccaattccatcat
tctctggtgggggtgtggtgtggggcacacattccatgttcttccatgcc
tgtgggtggtaagggaggaagagataatctaaaccatatacctccagtac

gaattcctctcaacacacagcgcattctccagggtcaatcacctgtcacc
tcagggaaatgcttaacaaacttggggcgacggagagtacatgaattaat
ctttttgatctgtagtggtatgaaactagaagttgatcattgaagaaaac
tttttaaaaaatattacaaataggaggaaactaggttcagcctgctccac
tgaggcagggaatccgaagcaataaaatacaaattaaaaaatacgaaatg
gaaccagaggagtagtaagagaaaacatgtatagaaataaactctacata
agaaagtacaaacatatgtgctatgggcaggcagggaaagaagcctaaga
tgatcccccagctcagtgccgtgtggcccaggtgggcaaagaacctccaa
gatcactgctgcctagtgtcacagggcctagatgggcaaaccacacctga
gacaaccccaaacaaccagaggctccaggcatcactaagacacacgagtt
agtggtgaccctgtctcagagatggaagagagagagtaagacagaaagat
gtgtgtacaataatgagacctgaaactggagactcagtgtattagggaac
agaaggatgtgagtagccaggaaatgccacctggggccatagtgaggtcc
tggcccatgctgccaccgagagctatgtctgggtttatggccctatagca
attcggtctgttaacaccaaaggccaggcagatgtccctggtctggggcc
atgttgatgtctgagaactgtgcaaagctggccccacctcttgcatgggc
atcatgggagagctggatccaaaggcctgagaccaggaaagctggccctg
tcccttgacagctacagcaatcaaggagagtggaccctgccactgggccc
aggaagcagagtagagctgggccctgcttaggacactttctggagagctg
gccttgctttcatctgccattcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_89494718_89495688
seq2: B6Ng01-244F15.g_67_1040

seq1  GAATTCCTCTCAACACACAGCGCATTCTCCAGGGTCAATCACCTGTCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTCAACACACAGCGCATTCTCCAGGGTCAATCACCTGTCACC  50

seq1  TCAGGGAAATGCTTAACAAACTTGGGGCGACGGAGAGTACATGAATTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGAAATGCTTAACAAACTTGGGGCGACGGAGAGTACATGAATTAAT  100

seq1  CTTTTTGATCTGTAGTGGTATGAAACTAGAAGTTGATCATTGAAGAAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGATCTGTAGTGGTATGAAACTAGAAGTTGATCATTGAAGAAAAC  150

seq1  TTTTTAAAAAATATTACAAATAGGAGGAAACTAGGTTCAGCCTGCTCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAAAATATTACAAATAGGAGGAAACTAGGTTCAGCCTGCTCCAC  200

seq1  TGAGGCAGGGAATCCGAAGCAATAAAATACAAATTAAAAAATACGAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCAGGGAATCCGAAGCAATAAAATACAAATTAAAAAATACGAAATG  250

seq1  GAACCAGAGGAGTAGTAAGAGAAAACATGTATAGAAATAAACTCTACATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAGAGGAGTAGTAAGAGAAAACATGTATAGAAATAAACTCTACATA  300

seq1  AGAAAGTACAAACATATGTGCTATGGGCAGGCAGGGAAAGAAGCCTAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTACAAACATATGTGCTATGGGCAGGCAGGGAAAGAAGCCTAAGA  350

seq1  TGATCCCCCAGCTCAGTGCCGTGTGGCCCAGGTGGGCAAAGAACCTCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCCCCAGCTCAGTGCCGTGTGGCCCAGGTGGGCAAAGAACCTCCAA  400

seq1  GATCACTGCTGCCTAGTGTCACAGGGCCTAGATGGGCAAACCACACCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACTGCTGCCTAGTGTCACAGGGCCTAGATGGGCAAACCACACCTGA  450

seq1  GACAACCCCAAACAACCAGAGGCTCCAGGCATCACTAAGACACACGAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACCCCAAACAACCAGAGGCTCCAGGCATCACTAAGACACACGAGTT  500

seq1  AGTGGTGACCCTGTCTCAGAGATGGAAGAGAGAGAGTAAGACAGAAAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTGACCCTGTCTCAGAGATGGAAGAGAGAGAGTAAGACAGAAAGAT  550

seq1  GTGTGTACAATAATGAGACCTGAAACTGGAGACTCAGTGTATTAGGGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTACAATAATGAGACCTGAAACTGGAGACTCAGTGTATTAGGGAAC  600

seq1  AGAAGGATGTGAGTAGCCAGGAAATGCCACCTGGGGCCATAGTGAGGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGATGTGAGTAGCCAGGAAATGCCACCTGGGGCCATAGTGAGGTCC  650

seq1  TGGCCCATGCTGCCACCGAGAGCTATGTCTGGGTTTATGGCCCTATAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCATGCTGCCACCGAGAGCTATGTCTGGGTTTATGGCCCTATAGCA  700

seq1  ATTCGGTCTGTTAACACCAAAGGCCAGGCAGATGTCCCTGGTCTGGGGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGGTCTGTTAACACCAAAGGCCAGGCAGATGTCCCTGGTCTGGGGCC  750

seq1  ATGTTGATGTCTGAGAACTGTGCAAAGCTGGCCCCACCTCTTGCAGGGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATGTTGATGTCTGAGAACTGTGCAAAGCTGGCCCCACCTCTTGCATGGGC  800

seq1  ATCATGGGAGAGCTGGATCCAAAGGCCTGAGACCAGGAAAGCTGGCCCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGGGAGAGCTGGATCCAAAGGCCTGAGACCAGGAAAGCTGGCCCTG  850

seq1  TCCCTTGACAGCTACAGCAATC-AGGAGAGTGGACCCTGCCACT-GGCCC  898
      |||||||||||||||||||||| ||||||||||||||||||||| |||||
seq2  TCCCTTGACAGCTACAGCAATCAAGGAGAGTGGACCCTGCCACTGGGCCC  900

seq1  AGGAAGCAGAGTAGAGCT-GGCCCTGCTTAGGACACTTTCTGGAGAGCTG  947
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGGAAGCAGAGTAGAGCTGGGCCCTGCTTAGGACACTTTCTGGAGAGCTG  950

seq1  GCCTTGCCTTCATCTGCCATTCAG  971
      ||||||| ||||||||||||||||
seq2  GCCTTGCTTTCATCTGCCATTCAG  974