BAC Information

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BAC

Clone NameB6Ng01-244J02
Chromosome16 (Build37)
Map Location 83,926,352 - 83,927,439
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545172, LOC100039572
Downstream geneEG621729, LOC640489, LOC665664, LOC547311, LOC100039893, LOC100039634, Mrpl39, Jam2, Atp5j, LOC100039950, Gabpa, Gm311
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244J02.bB6Ng01-244J02.g
ACCGA053668GA053669
length1,2041,090
definitionB6Ng01-244J02.b B6Ng01-244J02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttaagctctgcacaccatttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatatatatatatatatatatata
tatattggatattagtcccctatctgatttaggatagttaaagatccttt
cccaatctgttggtggcctttttgtcttattgacggtatcctttgcctta
cagaacctttgcaattttatgaggtcccatttgtcgattctcgatctttc
agcacaaaccattgctgttctattcaggaatttctcccctgtgcccatat
cttctaggcttttccccactttctcctctataagtttcactgtctcaggt
tttatgtggagttccttgatccacttaaatttgacctaagtacaaggaga
taggagtggatcaatttgcattcttctacatgttaactgccaggtgtgcc
agcaccatttgttgaaaatgctgtctttttttccaatggatggttttatc
tcccttgtcaaagatcaagtgaccataggtgtttgggttcatttctcggc
cttcaattctattccattggtctccttgcctgtcactatacaagtaccat
gcagtttttatcacaattgctctgtagtacagctttaggtcaggcatggt
gattccaccagaggttcttttatccttgagaagagtttttgctatcctag
gttttttgttattccagatgaatttgcagattgccctttctaattcattg
aagaattgagttggaaattttgatggggatttcactgaatctgtagattg
cttttggcaagatagccatttttattatattgatcctgccaatccatgag
catgggagatctttccaccttcaaagatctttctttaatttctttcttca
gagacttgatgttattatcatacagatctttcactttccttttgttagag
tcatgccaaggtattttatattatttgtgactattgagaagggtgttgtt
tccttaatttctttcctcagactcttatccttctgtacagaaaaggccat
tgactttgttgagtaatttatattcccagctaccttcactgaagttcttt
ctcaggttaggagacttcctctggtgaattttaggggtcacttatatagc
cgatctaatcgctacgctaagatgttacgtttgagacgttcattcattct
ccaa
gaattccaagcccagagttggctaaaggactacctaggacattggtgaag
gccaggaagcaaagtttgattttgcttaggtatttggcaagtcattactt
ggaggcacctataacaaaacaatactgaaaggaagcacacagatccattc
gcaaggacaaaattggtgcatacgtgttatgggatgccacattccaagag
actaagtttccgtgaaactctttgcctagggactgcttccaggtttctaa
acctatcaagcaagtcactactggagtggatgtagcagatagcgaggaga
gataaccaagtacaaggcaggtctcacattataataaactggaaattaag
ttatgagctcatcagagaatgagccaaaattattggcgtagaaatttatt
catatataagaaatctcagtgtcattatgactgggaaaaattaggctggg
tggaaagctggtggttacacttctattctgctaaatgagctttatattaa
attaagccctaagtttcaatatactacattttatccagaataagtgtgtt
tatatctgtaacaagcataagtaaatggagatagtattatattgacaact
gaatttcagtacatgcagtgttatattttaaataaatatgagatcaattc
atattataaaacattacttcagaagtaaccataaataacacttatgatgc
aatttcaagaggaatgctttctcatgtgtaaaggaattttaatcaagcaa
tggatcacttccaaagacctaggtgtgtataattcatagattacagaccc
tcctttcatcccaagagatataggcaagacttctgagttcaaggacagct
ttgtatagaacaaattttaggtaagaaaagcttaagtccaggtgtgatag
cacatacctttgatcccatcactcaggaaatggatgcatggagatctctg
agtgcttgtcagttgatttcagcctctataggtgggagttcagttccatc
tgctcgtcttgtgagtcggttcaggtctttcgtgcagtgaatgcagtcag
aggaactgagttaggttttggagttcatgcagttccgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_83926352_83927439
seq2: B6Ng01-244J02.g_67_1156

seq1  GAATTCCAAGCCCAGAGTTGGCTAAAGGACTACCTAGGACATTGGTGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGCCCAGAGTTGGCTAAAGGACTACCTAGGACATTGGTGAAG  50

seq1  GCCAGGAAGCAAAGTTTGATTTTGCTTAGGTATTTGGCAAGTCATTACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGAAGCAAAGTTTGATTTTGCTTAGGTATTTGGCAAGTCATTACTT  100

seq1  GGAGGCACCTATAACAAAACAATACTGAAAGGAAGCACACAGATCCATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCACCTATAACAAAACAATACTGAAAGGAAGCACACAGATCCATTC  150

seq1  GCAAGGACAAAATTGGTGCATACGTGTTATGGGATGCCACATTCCAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGACAAAATTGGTGCATACGTGTTATGGGATGCCACATTCCAAGAG  200

seq1  ACTAAGTTTCCGTGAAACTCTTTGCCTAGGGACTGCTTCCAGGTTTCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGTTTCCGTGAAACTCTTTGCCTAGGGACTGCTTCCAGGTTTCTAA  250

seq1  ACCTATCAAGCAAGTCACTACTGGAGTGGATGTAGCAGATAGCGAGGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATCAAGCAAGTCACTACTGGAGTGGATGTAGCAGATAGCGAGGAGA  300

seq1  GATAACCAAGTACAAGGCAGGTCTCACATTATAATAAACTGGAAATTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACCAAGTACAAGGCAGGTCTCACATTATAATAAACTGGAAATTAAG  350

seq1  TTATGAGCTCATCAGAGAATGAGCCAAAATTATTGGCGTAGAAATTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAGCTCATCAGAGAATGAGCCAAAATTATTGGCGTAGAAATTTATT  400

seq1  CATATATAAGAAATCTCAGTGTCATTATGACTGGGAAAAATTAGGCTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATAAGAAATCTCAGTGTCATTATGACTGGGAAAAATTAGGCTGGG  450

seq1  TGGAAAGCTGGTGGTTACACTTCTATTCTGCTAAATGAGCTTTATATTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGCTGGTGGTTACACTTCTATTCTGCTAAATGAGCTTTATATTAA  500

seq1  ATTAAGCCCTAAGTTTCAATATACTACATTTTATCCAGAATAAGTGTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGCCCTAAGTTTCAATATACTACATTTTATCCAGAATAAGTGTGTT  550

seq1  TATATCTGTAACAAGCATAAGTAAATGGAGATAGTATTATATTGACAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTGTAACAAGCATAAGTAAATGGAGATAGTATTATATTGACAACT  600

seq1  GAATTTCAGTACATGCAGTGTTATATTTTAAATAAATATGAGATCAATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTCAGTACATGCAGTGTTATATTTTAAATAAATATGAGATCAATTC  650

seq1  ATATTATAAAACATTACTTCAGAAGTAACCATAAATAACACTTATGATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATAAAACATTACTTCAGAAGTAACCATAAATAACACTTATGATGC  700

seq1  AATTTCAAGAGGAATGCTTTCTCATGTGTAAAGGAATTTTAATCAAGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAAGAGGAATGCTTTCTCATGTGTAAAGGAATTTTAATCAAGCAA  750

seq1  TGGATCACTTCCAAAGACCTAGGTGTGTATAATTCATAGATTACAGACCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCACTTCCAAAGACCTAGGTGTGTATAATTCATAGATTACAGACCC  800

seq1  TCCTTTCATCCCAAGAGATATAGGCAAGACTTCTGAGTTCAAGGACAGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCATCCCAAGAGATATAGGCAAGACTTCTGAGTTCAAGGACAGCT  850

seq1  TTGTATAGAACAAATTTTAGGTAAAGAAAAGCTTAAGTCCAGGTGTGATA  900
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTGTATAGAACAAATTTTAGGT-AAGAAAAGCTTAAGTCCAGGTGTGATA  899

seq1  GCACATACCTTTGATCCCATCACTCAGGAAATGGATGCATGGAGATCTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATACCTTTGATCCCATCACTCAGGAAATGGATGCATGGAGATCTCT  949

seq1  GAGTGCTTGTCAGTTGATTTCAGCCTCTATAG--TGGAGTTCAGTTCCAT  998
      ||||||||||||||||||||||||||||||||   |||||||||||||||
seq2  GAGTGCTTGTCAGTTGATTTCAGCCTCTATAGGTGGGAGTTCAGTTCCAT  999

seq1  CTGCTCGGTCTGTTGAGTTCGGTTCA-GTCTTTCCGTGCAGTGAATGCAG  1047
      |||||| ||||  |||| |||||||| |||||| ||||||||||||||||
seq2  CTGCTC-GTCTTGTGAG-TCGGTTCAGGTCTTT-CGTGCAGTGAATGCAG  1046

seq1  TTCAGAGGAACTGAG-TAG--TTTTGAGTTCATGCAGTT-CGAGA  1088
       |||||||||||||| |||  ||| |||||||||||||| |||||
seq2  -TCAGAGGAACTGAGTTAGGTTTTGGAGTTCATGCAGTTCCGAGA  1090