BAC Information

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BAC

Clone NameB6Ng01-244K05
Chromosome16 (Build37)
Map Location 12,097,385 - 12,098,509
singlet/doubletsinglet
Overlap gene2700045P11Rik
Upstream geneTxndc11, Zc3h7a, LOC665450, LOC622271, Rsl1d1, Gspt1, Tnfrsf17, 4933437K13Rik, LOC100043171, C530044N13Rik
Downstream geneEG622509, LOC622553
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244K05.bB6Ng01-244K05.g
ACCGA053722GA053723
length1,11497
definitionB6Ng01-244K05.b B6Ng01-244K05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggcaaggcataacagagtgaggttgcctctgacacaggacaca
catgagcaaatctgcccaggtagactgtcctggtagaggaaatggtgtca
tcaaagtcctgggggtgaagggaggataaaagtgactggacaaaaaataa
acaaaaacctgaacaagttcacagtggctgtataggaaagccaaataagc
aataagtcacaatagaaccagatcataatcataggaagggttagcttgcc
ctctgcaagtactgggagccatagagttttgtaaacagcaggtagtagaa
aaaaaaattttttttttggtgaaacctcttctcggggagtgttggttaac
ccactgtgtgacacgctctaagccctgtttcctgaaaattgagaaagaga
cctgaagacctggagccatagctcttatcctgggactagtgcccccaaaa
tctgtgagtttgccctggaattctgtaaactcagttggtctcaaactcac
agagttctgcctatctctgcctcccaagtgctgggattaaagtcgtgagc
caccactccccggctgcttttcagtattccttaattcaaagattctactg
ggttactctgtgtatcatgcagagactgggagagtataggcctgctctct
tggagtttatattctaatgagagagtcaagccataatcatgaagatgtac
agatgaatgagatagtctggaactctgtaggtgctataaaaaattaaaaa
gagatgccaagggacagaggctgtgtaggagaggaggctgcctccagagg
tggccttcaagacgcccctgaatgctgcaatagccatgaaaacacccaga
gattatatagagatagcatgtgcataaagcatgaggcagagggtagcact
gaggggtgggaggagctagcagaggaggctgatgttcaagcagagagagg
gagagatcagaaggaggacagtggccagagcaacacccttagcaggcaca
gcaggcaacgtccctaatgcagtaggtggcatggagtggagaacagggag
tgttcagcattgatggcagaccaaaggcttgtcactccgtacagagcatg
atgggaaaccgaga
gaattcacagtcaaaagttgatagtgaagaggaggaggaggagcaagaag
aggaggcgggaggaggaggcgggaggaggggaaggggaaggtgaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_12097385_12098509
seq2: B6Ng01-244K05.b_46_1159 (reverse)

seq1  TCTCTGGTTCCCCATCATGCTCTGTACGGGAGTGACAACCCTTTGTGCTG  50
      |||| |||| ||||||||||||||||| |||||||||| ||||||  |||
seq2  TCTC-GGTTTCCCATCATGCTCTGTAC-GGAGTGACAAGCCTTTGGTCTG  48

seq1  CCCTTCAAATGCTGACCACTTCCTG-TCTCCACTCCATGCCACCCTACTG  99
      || |   |||||||| |||| |||| |||||||||||||||| |||||||
seq2  CCAT--CAATGCTGAACACTCCCTGTTCTCCACTCCATGCCA-CCTACTG  95

seq1  CATTGGGGACGGTTTGCCTGCTGTGCCCTGCTAAGGGTGTTTGCTCTGGC  149
      |||| ||||||  |||||||||||| ||||||||||||| ||||||||||
seq2  CATTAGGGACG--TTGCCTGCTGTG-CCTGCTAAGGGTG-TTGCTCTGGC  141

seq1  CACTGTCCTCCCTTCTGTTCCTCTCCCTCTCTCTGCCTTGAACATCAGCC  199
      ||||||||| ||||||| | ||||||||||||||| ||||||||||||||
seq2  CACTGTCCT-CCTTCTGAT-CTCTCCCTCTCTCTG-CTTGAACATCAGCC  188

seq1  TCCTCTGCTAGCTCCTCCCACCCCTCAGTGCTACCCTCTGCCTCATGCTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGCTAGCTCCTCCCACCCCTCAGTGCTACCCTCTGCCTCATGCTT  238

seq1  TATGCACATGCTATCTCTATATAATCTCTGGGTGTTTTCATGGCTATTGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACATGCTATCTCTATATAATCTCTGGGTGTTTTCATGGCTATTGC  288

seq1  AGCATTCAGGGGCGTCTTGAAGGCCACCTCTGGAGGCAGCCTCCTCTCCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCAGGGGCGTCTTGAAGGCCACCTCTGGAGGCAGCCTCCTCTCCT  338

seq1  ACACAGCCTCTGTCCCTTGGCATCTCTTTTTAATTTTTTATAGCACCTAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCCTCTGTCCCTTGGCATCTCTTTTTAATTTTTTATAGCACCTAC  388

seq1  AGAGTTCCAGACTATCTCATTCATCTGTACATCTTCATGATTATGGCTTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTCCAGACTATCTCATTCATCTGTACATCTTCATGATTATGGCTTG  438

seq1  ACTCTCTCATTAGAATATAAACTCCAAGAGAGCAGGCCTATACTCTCCCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTCATTAGAATATAAACTCCAAGAGAGCAGGCCTATACTCTCCCA  488

seq1  GTCTCTGCATGATACACAGAGTAACCCAGTAGAATCTTTGAATTAAGGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGCATGATACACAGAGTAACCCAGTAGAATCTTTGAATTAAGGAA  538

seq1  TACTGAAAAGCAGCCGGGGAGTGGTGGCTCACGACTTTAATCCCAGCACT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAAAAGCAGCCGGGGAGTGGTGGCTCACGACTTTAATCCCAGCACT  588

seq1  TGGGAGGCAGAGATAGGCAGAACTCTGTGAGTTTGAGACCAACTGAGTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGCAGAGATAGGCAGAACTCTGTGAGTTTGAGACCAACTGAGTTT  638

seq1  ACAGAATTCCAGGGCAAACTCACAGATTTTGGGGGCACTAGTCCCAGGAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATTCCAGGGCAAACTCACAGATTTTGGGGGCACTAGTCCCAGGAT  688

seq1  AAGAGCTATGGCTCCAGGTCTTCAGGTCTCTTTCTCAATTTTCAGGAAAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTATGGCTCCAGGTCTTCAGGTCTCTTTCTCAATTTTCAGGAAAC  738

seq1  AGGGCTTAGAGCGTGTCACACAGTGGGTTAACCAACACTCCCCGAGAAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTTAGAGCGTGTCACACAGTGGGTTAACCAACACTCCCCGAGAAGA  788

seq1  GGTTTCACCAAAAAAAAAATTTTTTTTTCTACTACCTGCTGTTTACAAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCACCAAAAAAAAAATTTTTTTTTCTACTACCTGCTGTTTACAAAA  838

seq1  CTCTATGGCTCCCAGTACTTGCAGAGGGCAAGCTAACCCTTCCTATGATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGGCTCCCAGTACTTGCAGAGGGCAAGCTAACCCTTCCTATGATT  888

seq1  ATGATCTGGTTCTATTGTGACTTATTGCTTATTTGGCTTTCCTATACAGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTGGTTCTATTGTGACTTATTGCTTATTTGGCTTTCCTATACAGC  938

seq1  CACTGTGAACTTGTTCAGGTTTTTGTTTATTTTTTGTCCAGTCACTTTTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGAACTTGTTCAGGTTTTTGTTTATTTTTTGTCCAGTCACTTTTA  988

seq1  TCCTCCCTTCACCCCCAGGACTTTGATGACACCATTTCCTCTACCAGGAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCTTCACCCCCAGGACTTTGATGACACCATTTCCTCTACCAGGAC  1038

seq1  AGTCTACCTGGGCAGATTTGCTCATGTGTGTCCTGTGTCAGAGGCAACCT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTACCTGGGCAGATTTGCTCATGTGTGTCCTGTGTCAGAGGCAACCT  1088

seq1  CACTCTGTTATGCCTTGCCAGAATTC  1125
      ||||||||||||||||||||||||||
seq2  CACTCTGTTATGCCTTGCCAGAATTC  1114