BAC Information

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BAC

Clone NameB6Ng01-245C02
Chromosome16 (Build37)
Map Location 86,577,105 - 86,578,029
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039994, LOC622000, Adamts1, Adamts5, LOC100040025, LOC100039780
Downstream geneN6amt1, Zfp294, ORF5, LOC100040088, Usp16, Cct8, B130034C11Rik, LOC435486, ORF63
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245C02.bB6Ng01-245C02.g
ACCGA054094GA054095
length1,197964
definitionB6Ng01-245C02.b B6Ng01-245C02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgggatagaactaggcaggagagtcacaaggaagatgtaacaaa
agggcattacatggtacccaaacacagataaccagccatgcggcagagtg
caggttaaaataagtagtttatcttaagctatgatcctagtcagagaaga
tcctagctagatagttgaggtttttgtaaaaatattttaagtctgagtct
tattcctgggagcatggagctgggtgggagaaccagagcataacttcaac
acataatatttaaaatattaaacatataaaacacagaaggaatatcaaaa
gctgcaagggaaaacggacaagtagcattgagaggcaagcagacctcctg
gaattataccttacttctcctgcagactctaaaagactaatgggcctgga
aagatatgttgaaaactctaagaggccacagaagccagctcagactacta
taatttactgtaggaatatttaataaatcctggcatggggttccttccat
ttatgttcccataatggaaacacacacacacacacacacacacacacaca
cacacacacacacacacagagagagagagagtcttcatgttgagcagcac
aatagctgggcatctgcctgtaatatccatgctattagaatctacgttca
cattgataagttattactaatttcaaagtgccatcatggctgttctttac
ccaattgatcagccctctgggccacattctcttggtccttttacatggat
tctctccttttctctcctgcacatttttcttacatggcagttctgtatcc
tgcatgttctttctcttcaatggcggctttcctgtctccctttcctcctc
cttgtagtcccaagcctgggaaaactaaacacctatttctcttctcctcg
gctattgacatctttatttaccaatcacaattaacttcggacaagtttcc
aaaactacatacttattccaaacccttggatgccagcactttacatttaa
atatgaacatattagggtcacccactagacacccagcaaatttttcagtt
accatagatgggaaaaacgaaacaggtccatgacaagttatatttcaaac
aatatttattctatcattcagatacattgagtactgagaagactgccatc
caagggaggttaacctgccactctctccacaaacacactccagtgat
gaattcttctgaaatttaacattagtatctatgagtttttgtctacttag
ctgagtttaaaagctgagcacatataagctgagtacaaataagacttcct
gtggtcgggacatttctcatgcctataggcagtacttgctacttcttcag
actttctactttgttttccacaaggaccctgaaaacacattagacaagga
gtcatatctcctaaacagggctatcctttgtgaaaactatgagtctcacc
ttcacatagtaactagcatcaacatacaatgagttgtcttgtatcagaca
gctaatctaatctcagcggggaaaaaaaaaaaaaaaaacctaaacagctt
ccatgcatggatatttgtctaagatattcaagggccttctaggaagtgtc
caagagatttcctatgttagtaaagggcagttttcaaagctgagtgtaat
ttaaacaatcacctgaggatacagagtagaagtaagaggtggaatcaggc
acaagggcaatatgaagagaaaaagcatagaaacagcaagccatgccaca
gcatagactagttgttagtgccaaacactaaatctctctgacagaaagca
aaggaatagcagttgaaacagattgctttagaattacacaaaggagtgtc
ttttctagagtgacagtattgagttaggatttggggttggtagattagaa
ataggaaattcaccataatcctgtagacatgaacgtacactgaatggaag
tttaattttaaagtaaggtaggatttcagatattcagagcagaacactaa
gtgtaccactgtctaaccaatataaataagctactattttgggagattgt
tttggagttccactcaaaaactgtgagtatacatttttatcctattaccc
aatcttcctgaacatggttacctatctgatggatttagccaaatccttga
tttaaacgttacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_86577105_86578029
seq2: B6Ng01-245C02.g_68_1002

seq1  GAATTCTTCTGAAATTTAACATTAGTATCTATGAGTTTTTGTCTACTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGAAATTTAACATTAGTATCTATGAGTTTTTGTCTACTTAG  50

seq1  CTGAGTTTAAAAGCTGAGCACATATAAGCTGAGTACAAATAAGACTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTTAAAAGCTGAGCACATATAAGCTGAGTACAAATAAGACTTCCT  100

seq1  GTGGTCGGGACATTTCTCATGCCTATAGGCAGTACTTGCTACTTCTTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCGGGACATTTCTCATGCCTATAGGCAGTACTTGCTACTTCTTCAG  150

seq1  ACTTTCTACTTTGTTTTCCACAAGGACCCTGAAAACACATTAGACAAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTACTTTGTTTTCCACAAGGACCCTGAAAACACATTAGACAAGGA  200

seq1  GTCATATCTCCTAAACAGGGCTATCCTTTGTGAAAACTATGAGTCTCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATCTCCTAAACAGGGCTATCCTTTGTGAAAACTATGAGTCTCACC  250

seq1  TTCACATAGTAACTAGCATCAACATACAATGAGTTGTCTTGTATCAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATAGTAACTAGCATCAACATACAATGAGTTGTCTTGTATCAGACA  300

seq1  GCTAATCTAATCTCAGCGGGGAAAAAAAAAAAAAAAAACCTAAACAGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATCTAATCTCAGCGGGGAAAAAAAAAAAAAAAAACCTAAACAGCTT  350

seq1  CCATGCATGGATATTTGTCTAAGATATTCAAGGGCCTTCTAGGAAGTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCATGGATATTTGTCTAAGATATTCAAGGGCCTTCTAGGAAGTGTC  400

seq1  CAAGAGATTTCCTATGTTAGTAAAGGGCAGTTTTCAAAGCTGAGTGTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGATTTCCTATGTTAGTAAAGGGCAGTTTTCAAAGCTGAGTGTAAT  450

seq1  TTAAACAATCACCTGAGGATACAGAGTAGAAGTAAGAGGTGGAATCAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAATCACCTGAGGATACAGAGTAGAAGTAAGAGGTGGAATCAGGC  500

seq1  ACAAGGGCAATATGAAGAGAAAAAGCATAGAAACAGCAAGCCATGCCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGGCAATATGAAGAGAAAAAGCATAGAAACAGCAAGCCATGCCACA  550

seq1  GCATAGACTAGTTGTTAGTGCCAAACACTAAATCTCTCTGACAGAAAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGACTAGTTGTTAGTGCCAAACACTAAATCTCTCTGACAGAAAGCA  600

seq1  AAGGAATAGCAGTTGAAACAGATTGCTTTAGAATTACACAAAGGAGTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATAGCAGTTGAAACAGATTGCTTTAGAATTACACAAAGGAGTGTC  650

seq1  TTTTCTAGAGTGACAGTATTGAGTTAGGATTTGGGGTTGGTAGATTAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAGAGTGACAGTATTGAGTTAGGATTTGGGGTTGGTAGATTAGAA  700

seq1  ATAGGAAATTCACCATAATCCTGTAGACATGAACGTACACTGAATGGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAATTCACCATAATCCTGTAGACATGAACGTACACTGAATGGAAG  750

seq1  TTTAATTTTAAAGTAAGGTAGGATTTCAGATATTCAGAGCAGAACACTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTTAAAGTAAGGTAGGATTTCAGATATTCAGAGCAGAACACTAA  800

seq1  GTGTACCACTGTCTAACCAATATAAATAAGCTACTA-TTTGGGAGA-TGT  848
      |||||||||||||||||||||||||||||||||||| ||||||||| |||
seq2  GTGTACCACTGTCTAACCAATATAAATAAGCTACTATTTTGGGAGATTGT  850

seq1  TTTGGAGTT-CACTCAAAAACTGTGAGTATACATTTAT---CTAT--ACC  892
      ||||||||| |||||||||||||||||||||||||| |   ||||   ||
seq2  TTTGGAGTTCCACTCAAAAACTGTGAGTATACATTTTTATCCTATTACCC  900

seq1  AATCTTCCTGAACAT-GTTA-CTATCTGATGGATT  925
      ||||||||||||||| |||| ||||||||||||||
seq2  AATCTTCCTGAACATGGTTACCTATCTGATGGATT  935