BAC Information

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BAC

Clone NameB6Ng01-245K14
Chromosome16 (Build37)
Map Location 12,058,952 - 12,059,847
singlet/doubletsinglet
Overlap gene2700045P11Rik
Upstream geneSnn, Txndc11, Zc3h7a, LOC665450, LOC622271, Rsl1d1, Gspt1, Tnfrsf17, 4933437K13Rik, LOC100043171, C530044N13Rik
Downstream geneEG622509, LOC622553
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245K14.bB6Ng01-245K14.g
ACCGA054489GA054490
length677730
definitionB6Ng01-245K14.b B6Ng01-245K14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcagtgactgctatccctttcaaagaccttgaggcacaagttt
tccagagatggagagagatcccttttcaatgctctttcttgatatgtgtg
tgtgtgtgtacatgcacacacacatgttcacacacaccatggcatgcatg
tggaagtcagatggaagcttgcaggactcagttctcaccttctgctttgt
ggctcccagggaaactggggacaccaggcttggacaatatcttcatgtgc
tcaggcgccatagccttgcttaatttgaaacaaaggggggaaaaaaagcc
ttacagcattcctgttataatttgcattctctttgattattcaggacttg
agtatcttttcatatgctgattacttgtttatatttcttctccagcgaat
taccagttcatgtccttaacctatttttctactgaagttttagaaaattt
taattgattggtgggaaagttttcccttcaagtccttaaaaaaaaaaaac
tatttcaaaggcatctctgaacatcactcttgactccttatacacaatgt
gtaaatgtgtttagcaagagagctgtctagtagggtgattatgggttttg
gggcgtctcttcccatcagatgtagagaggtcactggagttggtaatatt
ccttgaagatgaaaacactttccaccc

gaattcatgaattttttaggcaaatggatagaactagaaaatatcatcct
gagtgaggtaacccaatcacaaaagaacacacatggtatgcactcactga
taagtggatattagccccaaagttccaaataaccaggatacaattcacag
atcacatgaagctcaagaaagaagagtaaagtgtagttgcttcagtcctt
cttaggagaacaaaatattcacagaagcaaatatggagataaagtgttga
gcaaagactgaagaaaaggccacccagagactgtcccacctgggtattca
tcccatatacagttgccaacccagacactattgtgaatgccaagaagtgc
atgctgaaaggagcctgatatggctgtcccctgagaagtcctgtcagagt
cttacaaatacagaggcagatattcacagccaaccattggactgagcatg
gggtccccaatagaggagttagataaaggattgaaggagttgaaggggct
tgcaaccccataggaagaacatcaatatcaaccaaccagacccccccaga
gctcccagggactaagccatcaacagtggaatacacatggctccagctgc
atatgtagcagaggatggccttgtcatgcatcaatgggaggagaggtcct
tggtcctatgatggctctatggatgccccagtgtaggagaatcaagggca
gggaagtggagcgggtgggtgggtgggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_12058952_12059847
seq2: B6Ng01-245K14.b_46_722

seq1  GAATTCTTCAGTGACTGCTATCCCTTTCAAAGACCTTGAGGCACAAGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGTGACTGCTATCCCTTTCAAAGACCTTGAGGCACAAGTTT  50

seq1  TCCAGAGATGGAGAGAGATCCCTTTTCAATGCTCTTTCTTGATATGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGATGGAGAGAGATCCCTTTTCAATGCTCTTTCTTGATATGTGTG  100

seq1  TGTGTGTGTACATGCACACACACATGTTCACACACACCATGGCATGCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTACATGCACACACACATGTTCACACACACCATGGCATGCATG  150

seq1  TGGAAGTCAGATGGAAGCTTGCAGGACTCAGTTCTCACCTTCTGCTTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTCAGATGGAAGCTTGCAGGACTCAGTTCTCACCTTCTGCTTTGT  200

seq1  GGCTCCCAGGGAAACTGGGGACACCAGGCTTGGACAATATCTTCATGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCCAGGGAAACTGGGGACACCAGGCTTGGACAATATCTTCATGTGC  250

seq1  TCAGGCGCCATAGCCTTGCTTAATTTGAAACAAAGGGGGGAAAAAAAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCGCCATAGCCTTGCTTAATTTGAAACAAAGGGGGGAAAAAAAGCC  300

seq1  TTACAGCATTCCTGTTATAATTTGCATTCTCTTTGATTATTCAGGACTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGCATTCCTGTTATAATTTGCATTCTCTTTGATTATTCAGGACTTG  350

seq1  AGTATCTTTTCATATGCTGATTACTTGTTTATATTTCTTCTCCAGCGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTTTTCATATGCTGATTACTTGTTTATATTTCTTCTCCAGCGAAT  400

seq1  TACCAGTTCATGTCCTTAACCTATTTTTCTACTGAAGTTTTAGAAAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGTTCATGTCCTTAACCTATTTTTCTACTGAAGTTTTAGAAAATTT  450

seq1  TAATTGATTGGTGGGAAAGTTTTCCCTTCAAGTCCTTAAAAAAAAAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGATTGGTGGGAAAGTTTTCCCTTCAAGTCCTTAAAAAAAAAAAAC  500

seq1  TATTTCAAAGGCATCTCTGAACATCACTCTTGACTCCTTATACACAATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCAAAGGCATCTCTGAACATCACTCTTGACTCCTTATACACAATGT  550

seq1  GTAAATGTGTTTAGCAAGAGAGCTGTCTAGTAGGGTGATTATGGGTTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGTGTTTAGCAAGAGAGCTGTCTAGTAGGGTGATTATGGGTTTTG  600

seq1  GGGCGTCTCTTCCCATCAGATGTAGAGAGGTCACTGTGAGTTGGTAATAT  650
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GGGCGTCTCTTCCCATCAGATGTAGAGAGGTCACTG-GAGTTGGTAATAT  649

seq1  TCTTTGAAGATGAAAACACTTT-CACCCAGGTGTAAACAAACACACCACT  699
      || ||||||||||||||||||| |||||                      
seq2  TCCTTGAAGATGAAAACACTTTCCACCC----------------------  677

seq1  TTATTGAAGGAAAGAAGTTTGGGCTGTGAATTGCAAATGGAGAAACAGGA  749
                                                        
seq2  --------------------------------------------------  677

seq1  AGTTCAAGTCTGTTCTCAAACTGACAGAGCCCTCCTTGCAGGCACAGAAA  799
                                                        
seq2  --------------------------------------------------  677

seq1  AAGTTCTTGTGATTCTGAATAATTACTCAATTAATGTCACTCTGTTCATC  849
                                                        
seq2  --------------------------------------------------  677

seq1  TCTGTGGCAGAGTGGGCTGGAAGAGAGGAAGATGAGCCATGCCACCC  896
                                                     
seq2  -----------------------------------------------  677


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