BAC Information

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BAC

Clone NameB6Ng01-245N23
Chromosome16 (Build37)
Map Location 76,557,529 - 76,696,654
singlet/doubletdoublet
Overlap genenone
Upstream geneD930038D03Rik, Rbm11, Stch, LOC546667, Samsn1, 4930578N18Rik, LOC100039457, Nrip1, LOC100039316
Downstream gene1700063K16Rik, LOC665120, Usp25, 2810055G20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245N23.bB6Ng01-245N23.g
ACCGA054641GA054642
length1,1721,136
definitionB6Ng01-245N23.b B6Ng01-245N23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,695,475 - 76,696,654)(76,557,529 - 76,558,651)
sequence
gaattccatgagacagtgctcccaaagatccaagatcccatgcccagaag
ttctcattcagtggcggtaagagtggagcgtttcctgacactactgtgtt
ttgaaatcagtttggatgactataaagtgtaaaaaggattgagacacagt
cttctttaacctgtcctgactgcttagtcacctgaggagcctatacaaac
cccaatgtctgcatatatcttcccaaacgttctgatttgagggatggcca
gttgaacctatgaacacttaccagatgattgctagttagagacagattga
gaagccatgagctgggcactgaggggccaaataccaggtcctcagtgaaa
taattaatgcagaggtgggtgatccatagccccaaagacagttccagggt
gttagtgtgatctgagagtatttacatccaccaagtttgtaagttaggct
cctgatggttcccaggtagtgatgttgagaacctctgactcaaacaaaaa
tatttttgaagtggattactctccttgttatctccatgtaccgtaacctc
agcttaatacactcaatattcttcctcagcaacatcataacatgcacatt
tttgttatttagttatgaggactagtgagtccacactaatgctactagtt
aaaagttaactccttcactctccaccctactctccattttatttttcttt
ttggtaatttcagttcctgagaaatttgaaaaaaaattgctaaggattct
taatttgatcctatgcaaacaagagttaaggtcctctgaactacagtaag
tgattattaaaaattatataagcagaaaggactaggaggaacttagaaaa
tgccatttgtataaatcataataaaaagaaagttaaaggtcgtgttgacc
cacagtgttaaagggaaacactgtctactaaacacaaaaaggaaacaaat
tgtccatttcgtttgtccagtggtttgcaaatgaaagagatatttttgag
aacggattaataaaataggtaatatagataagctggttataaagatgtta
atgtattcaaccggctaaacaattgtacttccttgcttgatctacttctt
ctattccaagaaataaacacaccctcaggctggtttccttattttggcac
tctcataaaggataaccatagc
gaattctcttgaataagaaagaagaaagaaataatagtgttattcacaaa
tgagtgaattatctttattattaaattgttttaatttcactatttattgt
tcattatttatttgtttgttcactcattgttgttatttgagaatacagag
catcaaaactaggaccggggactaactaggcaaagagtctaacagcgaac
taaatgcctagccctcgtttttaaatttgttttaaaggaatgtcaatctg
tgtagccccagctggcctcaaacccatcattctaagtgccaggattatag
gcatacacttctgtgacgaaagtggagtgtgtttccagctctcccactta
gttatttatcttgaattcagtcatcacactgtttaggtggctattgttcc
ctctaggcattcccagagagaatgcctacttggtgccaggtcctggtttt
gaccctctgtattgttaaataacaatgaatgaatgaatgaatgaatgaat
gaatgaatgaatgaacaaacatacaaacaaataaacaataaatagggaca
ttaaaacaatttggtaataaagataattcactcatttatgaataacacag
tcatttctctcttctcctttctggatctgagttagtattgtctagtataa
agtatactattattttttatagaactttatatacagttctagggcagcaa
gagctacatcgagaagtcctgcatcaaaaacacaacaaaaacaaacaaac
aaacaaaacaaaaagaaaataaaaaataacaacagcagtaaaaaagattt
taggttgagagaactcaaataagcagccattcttcacatgtcttggtttg
gatgtattgtttttagggaatggttttcttatgtgtctcaggctgttctc
tgaaatgcaagaaagtaaatagaaccctcctcagggatacacaccatatg
atgctgtcttctgaaaagccttgagttgttatttattctgacctaaggaa
ccagggcatagatggagttctaacggaattttttattctttcaggccatg
accgttaatcaaatcaaaaagtgtttgttttgaattccatgaaattaggg
gtcaaaggatccatgcaacattgtcatgtttaacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_76695475_76696654
seq2: B6Ng01-245N23.b_43_1214 (reverse)

seq1  GCTATG---TTCCTTTATGAGA-TGACAAATAAGAGGGAACACAGCCTGG  46
      ||||||    |||||||||||| || |||  || | ||||  |||||| |
seq2  GCTATGGTTATCCTTTATGAGAGTGCCAA--AATAAGGAAACCAGCCT-G  47

seq1  AGGGTGTG-TTATTTCTGTGATTAAGAAGAAGTAGAATCAAGCAA-GAAG  94
      |||||||| ||||||||  || | ||||||||||| ||||||||| ||||
seq2  AGGGTGTGTTTATTTCTTGGAAT-AGAAGAAGTAG-ATCAAGCAAGGAAG  95

seq1  TACCATTGTTTAGCCCGGGTTTGAATTACATT-ACATCTTTAATTACCAG  143
      ||| |||||||||||   | ||||| |||||| |||||||| || |||||
seq2  TACAATTGTTTAGCC---GGTTGAA-TACATTAACATCTTT-ATAACCAG  140

seq1  CTTTTATTTCTATTTATTTTA-CTATTTTATTAATCCCGTTCCTCAAAAT  192
      ||        ||| ||| ||| ||||||||||||| ||||||   |||||
seq2  CT--------TATCTATATTACCTATTTTATTAAT-CCGTTCTCAAAAAT  181

seq1  ATCCTCTTTCATTTGC-AACCACTGGACAAACGAAATGGGACAATTTGTT  241
      || ||||||||||||| |||||||||||||||||||| ||||||||||||
seq2  AT-CTCTTTCATTTGCAAACCACTGGACAAACGAAAT-GGACAATTTGTT  229

seq1  TCC-TTTTGTGTTTAGTAGACAGTGTT--CCCTTAACACTGTGGGTCAAC  288
      ||| |||||||||||||||||||||||  || ||||||||||||||||||
seq2  TCCTTTTTGTGTTTAGTAGACAGTGTTTCCCTTTAACACTGTGGGTCAAC  279

seq1  ACGACC-TTAACTTTCTTTTTTATTATGATTTATAC-AATGGCATTTTCT  336
      |||||| ||||||||| ||||||||||||||||||| |||||||||||||
seq2  ACGACCTTTAACTTTC-TTTTTATTATGATTTATACAAATGGCATTTTCT  328

seq1  AAGTTCCTCCTAGTCCTTTCTGCTTATATAATTTTTAATAATCACTTACT  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCCTCCTAGTCCTTTCTGCTTATATAATTTTTAATAATCACTTACT  378

seq1  GTAGTTCAGAGGACCTTAACTCTTGTTTGCATAGGATCAAATTAAGAATC  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTCAGAGGACCTTAACTCTTGTTTGCATAGGATCAAATTAAGAATC  428

seq1  CTTAGCAATTTTTTTTCAAATTTCTCAGGAACTGAAATTACCAAAAAGAA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCAATTTTTTTTCAAATTTCTCAGGAACTGAAATTACCAAAAAGAA  478

seq1  AAATAAAATGGAGAGTAGGGTGGAGAGTGAAGGAGTTAACTTTTAACTAG  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAATGGAGAGTAGGGTGGAGAGTGAAGGAGTTAACTTTTAACTAG  528

seq1  TAGCATTAGTGTGGACTCACTAGTCCTCATAACTAAATAACAAAAATGTG  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATTAGTGTGGACTCACTAGTCCTCATAACTAAATAACAAAAATGTG  578

seq1  CATGTTATGATGTTGCTGAGGAAGAATATTGAGTGTATTAAGCTGAGGTT  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTATGATGTTGCTGAGGAAGAATATTGAGTGTATTAAGCTGAGGTT  628

seq1  ACGGTACATGGAGATAACAAGGAGAGTAATCCACTTCAAAAATATTTTTG  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTACATGGAGATAACAAGGAGAGTAATCCACTTCAAAAATATTTTTG  678

seq1  TTTGAGTCAGAGGTTCTCAACATCACTACCTGGGAACCATCAGGAGCCTA  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTCAGAGGTTCTCAACATCACTACCTGGGAACCATCAGGAGCCTA  728

seq1  ACTTACAAACTTGGTGGATGTAAATACTCTCAGATCACACTAACACCCTG  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACAAACTTGGTGGATGTAAATACTCTCAGATCACACTAACACCCTG  778

seq1  GAACTGTCTTTGGGGCTATGGATCACCCACCTCTGCATTAATTATTTCAC  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGTCTTTGGGGCTATGGATCACCCACCTCTGCATTAATTATTTCAC  828

seq1  TGAGGACCTGGTATTTGGCCCCTCAGTGCCCAGCTCATGGCTTCTCAATC  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGACCTGGTATTTGGCCCCTCAGTGCCCAGCTCATGGCTTCTCAATC  878

seq1  TGTCTCTAACTAGCAATCATCTGGTAAGTGTTCATAGGTTCAACTGGCCA  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTAACTAGCAATCATCTGGTAAGTGTTCATAGGTTCAACTGGCCA  928

seq1  TCCCTCAAATCAGAACGTTTGGGAAGATATATGCAGACATTGGGGTTTGT  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCAAATCAGAACGTTTGGGAAGATATATGCAGACATTGGGGTTTGT  978

seq1  ATAGGCTCCTCAGGTGACTAAGCAGTCAGGACAGGTTAAAGAAGACTGTG  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCTCCTCAGGTGACTAAGCAGTCAGGACAGGTTAAAGAAGACTGTG  1028

seq1  TCTCAATCCTTTTTACACTTTATAGTCATCCAAACTGATTTCAAAACACA  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAATCCTTTTTACACTTTATAGTCATCCAAACTGATTTCAAAACACA  1078

seq1  GTAGTGTCAGGAAACGCTCCACTCTTACCGCCACTGAATGAGAACTTCTG  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGTCAGGAAACGCTCCACTCTTACCGCCACTGAATGAGAACTTCTG  1128

seq1  GGCATGGGATCTTGGATCTTTGGGAGCACTGTCTCATGGAATTC  1180
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGGATCTTGGATCTTTGGGAGCACTGTCTCATGGAATTC  1172

seq1: chr16_76557529_76558651
seq2: B6Ng01-245N23.g_67_1202

seq1  GAATTCTCTTGAATAAGAAAGAAGAAAGAAATAATAGTGTTATTCACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTGAATAAGAAAGAAGAAAGAAATAATAGTGTTATTCACAAA  50

seq1  TGAGTGAATTATCTTTATTATTAAATTGTTTTAATTTCACTATTTATTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGAATTATCTTTATTATTAAATTGTTTTAATTTCACTATTTATTGT  100

seq1  TCATTATTTATTTGTTTGTTCACTCATTGTTGTTATTTGAGAATACAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATTTATTTGTTTGTTCACTCATTGTTGTTATTTGAGAATACAGAG  150

seq1  CATCAAAACTAGGACCGGGGACTAACTAGGCAAAGAGTCTAACAGCGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAAACTAGGACCGGGGACTAACTAGGCAAAGAGTCTAACAGCGAAC  200

seq1  TAAATGCCTAGCCCTCGTTTTTAAATTTGTTTTAAAGGAATGTCAATCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCCTAGCCCTCGTTTTTAAATTTGTTTTAAAGGAATGTCAATCTG  250

seq1  TGTAGCCCCAGCTGGCCTCAAACCCATCATTCTAAGTGCCAGGATTATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCCCCAGCTGGCCTCAAACCCATCATTCTAAGTGCCAGGATTATAG  300

seq1  GCATACACTTCTGTGACGAAAGTGGAGTGTGTTTCCAGCTCTCCCACTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACACTTCTGTGACGAAAGTGGAGTGTGTTTCCAGCTCTCCCACTTA  350

seq1  GTTATTTATCTTGAATTCAGTCATCACACTGTTTAGGTGGCTATTGTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTATCTTGAATTCAGTCATCACACTGTTTAGGTGGCTATTGTTCC  400

seq1  CTCTAGGCATTCCCAGAGAGAATGCCTACTTGGTGCCAGGTCCTGGTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGCATTCCCAGAGAGAATGCCTACTTGGTGCCAGGTCCTGGTTTT  450

seq1  GACCCTCTGTATTGTTAAATAACAATGAATGAATGAATGAATGAATGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTCTGTATTGTTAAATAACAATGAATGAATGAATGAATGAATGAAT  500

seq1  GAATGAATGAATGAACAAACATACAAACAAATAAACAATAAATAGGGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAATGAATGAACAAACATACAAACAAATAAACAATAAATAGGGACA  550

seq1  TTAAAACAATTTGGTAATAAAGATAATTCACTCATTTATGAATAACACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACAATTTGGTAATAAAGATAATTCACTCATTTATGAATAACACAG  600

seq1  TCATTTCTCTCTTCTCCTTTCTGGATCTGAGTTAGTATTGTCTAGTATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCTCTCTTCTCCTTTCTGGATCTGAGTTAGTATTGTCTAGTATAA  650

seq1  AGTATACTATTATTTTTTATAGAACTTTATATACAGTTCTAGGGCAGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATACTATTATTTTTTATAGAACTTTATATACAGTTCTAGGGCAGCAA  700

seq1  GAGCTACATCGAGAAGTCCTGCATCAAAAACACAACAAAAACAAACAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTACATCGAGAAGTCCTGCATCAAAAACACAACAAAAACAAACAAAC  750

seq1  AAACAAAACAAAAAGAAAATAAAAAATAACAACAGCAGTAAAAAAGATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACAAAAAGAAAATAAAAAATAACAACAGCAGTAAAAAAGATTT  800

seq1  TAGGTTGAGAGAACTCAAATAAGCAGCCATTCTTCACATGTCTTGGTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTGAGAGAACTCAAATAAGCAGCCATTCTTCACATGTCTTGGTTTG  850

seq1  GATGTATTGTTTTTAGGGAATGGTTTTCCCATGTGTCTCAGGCTGTTCTC  900
      ||||||||||||||||||||||||||||  ||||||||||||||||||||
seq2  GATGTATTGTTTTTAGGGAATGGTTTTCTTATGTGTCTCAGGCTGTTCTC  900

seq1  TGAAATGCAAGAAAGTAAATTAGAA-CCTCC-CAGGGATACACA-CATAT  947
      ||||||||||||||||||| ||||| ||||| |||||||||||| |||||
seq2  TGAAATGCAAGAAAGTAAA-TAGAACCCTCCTCAGGGATACACACCATAT  949

seq1  GATGCTGTCTTCTGAAAAAGCCTTGAGTTG-TATTTA-TCTGA-CTAAGG  994
      |||||||||||||| ||||||||||||||| |||||| ||||| ||||||
seq2  GATGCTGTCTTCTG-AAAAGCCTTGAGTTGTTATTTATTCTGACCTAAGG  998

seq1  AA-CAGGGCATAGAT-GAG-TCTAA-GGAATTTTT--ATCTTCAAGGGCA  1038
      || |||||||||||| ||| ||||| |||||||||   ||||  | ||| 
seq2  AACCAGGGCATAGATGGAGTTCTAACGGAATTTTTTATTCTTTCA-GGCC  1047

seq1  ATGA-CGTTAATCAAATCAAAAAGTG-TTGTTTGGA--TCCATGAAA-TA  1083
      |||| ||||||||||||||||||||| |||||| ||  ||||||||| ||
seq2  ATGACCGTTAATCAAATCAAAAAGTGTTTGTTTTGAATTCCATGAAATTA  1097

seq1  GGGG-CAAAGGACCCATGGCAGCATCTGCCATGTTTAACAG  1123
      |||| ||||||| |||| ||| ||| || ||||||||||||
seq2  GGGGTCAAAGGATCCAT-GCAACAT-TGTCATGTTTAACAG  1136