BAC Information

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BAC

Clone NameB6Ng01-246J15
Chromosome16 (Build37)3 (Build37)
Map Location 55,385,281 - 55,385,886111,630,941 - 111,631,100
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100043449, LOC667927, LOC436421, Zpld1
Downstream geneNfkbiz, Gm1752, Lrriq2, EG667966, LOC629242, Rpl24, Zbtb11, Pcnp, Rg9mtd1, Senp7, Impg2, LOC672835
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246J15.bB6Ng01-246J15.g
ACCGA055175GA055176
length610668
definitionB6Ng01-246J15.b B6Ng01-246J15.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(55,385,281 - 55,385,886)(111,630,941 - 111,631,100)
sequence
gaattcctcttggaagattttacctttgatgagtatgaagtgcccctcct
tgtcttttttgatgactttgggttggaagtagattttattacatattaga
atgtctactccagcttgtttcttcaatccatttgcttggaatattgtttt
ccagcctttcattctgagatagtgtctatctttttccctgagatgggttt
cctataagcagcacaatgttgggtcctgtttatgtagccagtctgttagt
ctatgtctttttattggggtgttgagtccattgttattaagagatattaa
ggaaaagtaattgtttcttcctattattttgttgttaaagttggcattct
gttcttgtggctgacttgttttaggtttgttgagggattaccttcttgct
ttttctaggacatggtttccgtccttgtattggctttattctgtcattat
cctttgaagggcgggattcttggaaagataatgtgtgaatttggttttat
cgtggaatactttggtttctccatctaaggtaattgaaagtttggctggt
tataatagcctgagttgtcatttgtgttctctatgtgtctgtataacatc
tgtccaggct
gaattctcttttctaagttctacatttgtggcttaatggaacttaaaaga
gtttcaagaattgacatgtctgttattaatgacacaacttacatcctggg
ttcatcacatttattttttgttttaattgtgtgtgtgtgtgtgagtgtgt
gtgtgtgtgtaaatacctgttgagtcctgcttatggataatgtggacagc
ctatgactattcttttttggtttggtttttttaaatttttgtttgtttgt
ttgtttgtttgtttgattgattgattgattgattttgagacagggtttct
ctgtatagccctggctgtcctagaactcactttgtagaccaggctggcct
caaactcagaaatccacctgcctctacctcctgagtgctggggttaaagg
attgtgcccccacgcccggctgtctgtgactattcttgacaatacctttc
aatatttttctcagaagcattatttttttttctgaaattggatgaatgtt
aatttgtgtttcccattgctataacaaattacaccctgataaattcatgg
ctacattagccacagaaggctttcattttcctgtttgtccttctaccctt
tacacttgaaaccatgctgcactttgtttcatctgagataaaggtccagt
ccctagaagctgaatatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_55385281_55385886
seq2: B6Ng01-246J15.b_47_651 (reverse)

seq1  CCTGGACAGATGTTATACAGACACTAAGAGAACACAAATGCCAGCCCAGG  50
      ||||||||||||||||||||||||  |||||||||||||| || | ||||
seq2  CCTGGACAGATGTTATACAGACACATAGAGAACACAAATGACAACTCAGG  50

seq1  CTACAATACCCAGCCAAACTTTCAATTACCTTAGATGGAGAAACCAAAGT  100
      |||  ||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTATTATAACCAGCCAAACTTTCAATTACCTTAGATGGAGAAACCAAAGT  100

seq1  ATTCCATGACAAAACCAAATTCACACATTATCTTTCAACGAATCCAGCCC  150
      |||||| || |||||||||||||||||||||||||| | |||||| ||||
seq2  ATTCCACGATAAAACCAAATTCACACATTATCTTTCCAAGAATCCCGCCC  150

seq1  TTCAAAGGATAATGACAGAAAAAAACCAATACAAGGACAGAAACCACATC  200
      |||||||||||||||||||| ||| ||||||||||||| |||||||  ||
seq2  TTCAAAGGATAATGACAGAATAAAGCCAATACAAGGACGGAAACCATGTC  200

seq1  CTAGAAAAAGCAAGAAAATAATCCTTCAACAAACCTAAAAGAAGACAGCC  250
      ||||||||||||||||  |||||| ||||||||||||||| ||| |||||
seq2  CTAGAAAAAGCAAGAAGGTAATCCCTCAACAAACCTAAAACAAGTCAGCC  250

seq1  ACAAGAACAGAATGCCAACTTTAACAACAAAAATAAAAGGAAGCAACAAT  300
      |||||||||||||||||||||||||||| ||||||| |||||| ||||||
seq2  ACAAGAACAGAATGCCAACTTTAACAAC-AAAATAATAGGAAGAAACAAT  299

seq1  TACTTTTCCTTAACATCTATTAATATCAATGGACTCAACTCCCCAATAAA  350
      ||||||||||||| |||| |||||| ||||||||||||| ||||||||||
seq2  TACTTTTCCTTAATATCTCTTAATAACAATGGACTCAACACCCCAATAAA  349

seq1  AAGACATAGACTAACAGACTGGCTACACAAACAGGACCCAACATTTTGCT  400
      ||||||||||||||||||||||||||| ||||||||||||||||| ||||
seq2  AAGACATAGACTAACAGACTGGCTACATAAACAGGACCCAACATTGTGCT  399

seq1  ACTTATAGGAAACCCATATCAGGGAAAAAGACAGACACTACCTTAGAATG  450
       |||||||||||||||| ||||||||||||| |||||||| || ||||||
seq2  GCTTATAGGAAACCCATCTCAGGGAAAAAGATAGACACTATCTCAGAATG  449

seq1  AAATGCTGGAAAACAATTTTCCAAGCAAATGGTCTGAAGAAACAACCTGG  500
      ||| ||||||||||||| ||||||||||||||  ||||||||||| ||||
seq2  AAAGGCTGGAAAACAATATTCCAAGCAAATGGATTGAAGAAACAAGCTGG  499

seq1  AGTAGACATTCTAATATCTAATAAAATTGACTTACAACCCAAAGTCATCA  550
      ||||||||||||||||| |||||||||  |||| ||||||||||||||||
seq2  AGTAGACATTCTAATATGTAATAAAATCTACTTCCAACCCAAAGTCATCA  549

seq1  AAAAAGACAAGGAGGGGCACTTCATATTCATCAAAGGTAAAATCCTCCAA  600
      |||||||||||||||||||||||||| ||||||||||||||||| |||||
seq2  AAAAAGACAAGGAGGGGCACTTCATACTCATCAAAGGTAAAATCTTCCAA  599

seq1  GAGGAA  606
      ||||||
seq2  GAGGAA  605

seq1: chr3_111630941_111631100
seq2: B6Ng01-246J15.g_67_226

seq1  GAATTCTCTTTTCTAAGTTCTACATTTGTGGCTTAGTGGAACTTAAAAGA  50
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GAATTCTCTTTTCTAAGTTCTACATTTGTGGCTTAATGGAACTTAAAAGA  50

seq1  GTTTCAAGAATTGACATGTCTGTTATTAATGACACAGCTTACATCCTGGG  100
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GTTTCAAGAATTGACATGTCTGTTATTAATGACACAACTTACATCCTGGG  100

seq1  TTCATCACATTTATTTTTTGTTTTAATTGTGTGTGTGTGTGTGTGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTCATCACATTTATTTTTTGTTTTAATTGTGTGTGTGTGTGTGAGTGTGT  150

seq1  GTGTGTGTGT  160
      ||||||||||
seq2  GTGTGTGTGT  160