BAC Information

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BAC

Clone NameB6Ng01-247K19
Chromosome16 (Build37)
Map Location 48,368,594 - 48,369,733
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC628776, EG667741, EG639644, EG637273, Dppa4, Dppa2
Downstream geneEG433023, Morc1, Trat1, EG667501, Retnlb, Retnla, Retnlg, 2310047C04Rik, C330027C09Rik, Myh15, 1700026J12Rik, LOC386061
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247K19.b
ACCGA055948
length1,134
definitionB6Ng01-247K19.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatcatttccaagtaaatccttagtaaaaactccactgagctgg
aaagttttgctgataatattctagacaaaactccaaacaacaaaaacaaa
acttctttatatcagagatcaaactttccaccccatttggacacacatga
ggagtcccaagggaacgctggtaatcggtgacacagctcctggggtcagc
agtttgtgtgcagggaacactccgaagctcagacatgacgcagttctttc
tcagatgactgctctctcaagataagactgagaaggatggggagaaactt
aaaaaaaaaattctaataaaaagccaattcttttaaattatactttgact
gattttgtgctataaggggcagctgatttctaaagatcatatttcttttc
aaagagttttatcgaaaggaagactaattgtaatgtgcttttcctcatag
tccaggaaaacaactgatacttcaaaagttataaaaacatctactttcat
gaaatagttactatttcactacaaaccaatttttcactaaatacacgctt
cctaatccaggagcttcctgggaaaagcaatggtctctccctgggtccta
aagactccggtgttcatggagagtatgggaaggtctgcacccccatctcc
taggatgggccaggtcagaggtcacgtgtggagatgctgccaggctccca
gcaggcacagtaagtcatcaccttgctttagcagttatgacttcctctgc
ctccaaacacatccctagttagccaggcacaagaggaacagaaaaggaag
gtgtgcccacattcctggtttccatggtctcaaaccaggagaatgtgcag
gagagcccagcgatgttaggaccttgggagtttggattcgtgggccatga
gagtgccaacagcatctttcactgcgaggtatatgatgttcttcacctgt
agcttatcctcatgattggtgtgagtgttatatccatcattgttaattag
gaaggatagaaacagaaatccaatgcaaggtcttatgagatccagctcca
catcagaaagatgagggtcaggacctgaagcctttaagagattgtttcag
atcctggacttgaataacattggcctttatttac
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_48368594_48369733
seq2: B6Ng01-247K19.b_45_1178 (reverse)

seq1  GTAAATAAA-GCAAATGTTAT--CAGTCCAGGGATCTG-AACAATCTCTT  46
      ||||||||| || ||||||||   |||||| ||||||| |||||||||||
seq2  GTAAATAAAGGCCAATGTTATTCAAGTCCA-GGATCTGAAACAATCTCTT  49

seq1  TAAGCTTCCAGGTTCCCTTGACCCTCATCTTTTCCTGATGTTGGAGCTTG  96
       |||  | |||||   | ||||||||||||||  |||||| |||||| ||
seq2  AAAGGCTTCAGGT---CCTGACCCTCATCTTT--CTGATG-TGGAGC-TG  92

seq1  GATCTCATAAGACCCTGCATTGGATTTCTGTTTCTTATCTTTCCTAATTA  146
      |||||||||||||| ||||||||||||||||||| |||| ||||||||||
seq2  GATCTCATAAGACCTTGCATTGGATTTCTGTTTC-TATCCTTCCTAATTA  141

seq1  ACAAATGATGGATATAACACTCACACCAATCATGAGGATAAGCTACAGGT  196
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AC-AATGATGGATATAACACTCACACCAATCATGAGGATAAGCTACAGGT  190

seq1  GAAGAACATCATATACCTCGCAGTGAAAGATGCTGTTGGCACTCTCATGG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAACATCATATACCTCGCAGTGAAAGATGCTGTTGGCACTCTCATGG  240

seq1  CCCACGAATCCAAACTCCCAAGGTCCTAACATCGCTGGGCTCTCCTGCAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACGAATCCAAACTCCCAAGGTCCTAACATCGCTGGGCTCTCCTGCAC  290

seq1  ATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCCTGGTTTGAGACCATGGAAACCAGGAATGTGGGCACACCTTCCT  340

seq1  TTTCTGTTCCTCTTGTGCCTGGCTAACTAGGGATGTGTTTGGAGGCAGAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTCCTCTTGTGCCTGGCTAACTAGGGATGTGTTTGGAGGCAGAG  390

seq1  GAAGTCATAACTGCTAAAGCAAGGTGATGACTTACTGTGCCTGCTGGGAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCATAACTGCTAAAGCAAGGTGATGACTTACTGTGCCTGCTGGGAG  440

seq1  CCTGGCAGCATCTCCACACGTGACCTCTGACCTGGCCCATCCTAGGAGAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCAGCATCTCCACACGTGACCTCTGACCTGGCCCATCCTAGGAGAT  490

seq1  GGGGGTGCAGACCTTCCCATACTCTCCATGAACACCGGAGTCTTTAGGAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTGCAGACCTTCCCATACTCTCCATGAACACCGGAGTCTTTAGGAC  540

seq1  CCAGGGAGAGACCATTGCTTTTCCCAGGAAGCTCCTGGATTAGGAAGCGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGAGAGACCATTGCTTTTCCCAGGAAGCTCCTGGATTAGGAAGCGT  590

seq1  GTATTTAGTGAAAAATTGGTTTGTAGTGAAATAGTAACTATTTCATGAAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTAGTGAAAAATTGGTTTGTAGTGAAATAGTAACTATTTCATGAAA  640

seq1  GTAGATGTTTTTATAACTTTTGAAGTATCAGTTGTTTTCCTGGACTATGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATGTTTTTATAACTTTTGAAGTATCAGTTGTTTTCCTGGACTATGA  690

seq1  GGAAAAGCACATTACAATTAGTCTTCCTTTCGATAAAACTCTTTGAAAAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGCACATTACAATTAGTCTTCCTTTCGATAAAACTCTTTGAAAAG  740

seq1  AAATATGATCTTTAGAAATCAGCTGCCCCTTATAGCACAAAATCAGTCAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGATCTTTAGAAATCAGCTGCCCCTTATAGCACAAAATCAGTCAA  790

seq1  AGTATAATTTAAAAGAATTGGCTTTTTATTAGAATTTTTTTTTTAAGTTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAATTTAAAAGAATTGGCTTTTTATTAGAATTTTTTTTTTAAGTTT  840

seq1  CTCCCCATCCTTCTCAGTCTTATCTTGAGAGAGCAGTCATCTGAGAAAGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCATCCTTCTCAGTCTTATCTTGAGAGAGCAGTCATCTGAGAAAGA  890

seq1  ACTGCGTCATGTCTGAGCTTCGGAGTGTTCCCTGCACACAAACTGCTGAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCGTCATGTCTGAGCTTCGGAGTGTTCCCTGCACACAAACTGCTGAC  940

seq1  CCCAGGAGCTGTGTCACCGATTACCAGCGTTCCCTTGGGACTCCTCATGT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGAGCTGTGTCACCGATTACCAGCGTTCCCTTGGGACTCCTCATGT  990

seq1  GTGTCCAAATGGGGTGGAAAGTTTGATCTCTGATATAAAGAAGTTTTGTT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCAAATGGGGTGGAAAGTTTGATCTCTGATATAAAGAAGTTTTGTT  1040

seq1  TTTGTTGTTTGGAGTTTTGTCTAGAATATTATCAGCAAAACTTTCCAGCT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGTTTGGAGTTTTGTCTAGAATATTATCAGCAAAACTTTCCAGCT  1090

seq1  CAGTGGAGTTTTTACTAAGGATTTACTTGGAAATGATAGAATTC  1140
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAGTTTTTACTAAGGATTTACTTGGAAATGATAGAATTC  1134