BAC Information

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BAC

Clone NameB6Ng01-248G06
Chromosome16 (Build37)
Map Location 57,222,327 - 57,389,297
singlet/doubletdoublet
Overlap geneTbc1d23, Tmem30c, 2610528E23Rik, 4631422O05Rik
Upstream geneImpg2, LOC672835, Abi3bp, Tfg, Gpr128, Tmem45a, LOC668026, LOC668036, 2310005G13Rik, Tomm70a, Nit2
Downstream geneCol8a1, LOC435480, LOC629342, LOC100043477
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248G06.bB6Ng01-248G06.g
ACCGA056482GA056483
length1,095857
definitionB6Ng01-248G06.b B6Ng01-248G06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,222,327 - 57,223,407)(57,388,455 - 57,389,297)
sequence
gaattcactcattacttcctcccacaagcgcttcctcaccttgtccccag
cctgtaacaattcatttattccatttacctatttggaatagttcaaagaa
atgcaatcatgacccatgacctttaatgcctgcctcttctgttcgcatta
tgtttccagctctgctcgtattatggtctatggaccagcacatgctttta
ctgccaaatattcttccactgcatgagtatatcatattttctttaccatc
tgatgatgaagttgtttcaagttggatattatgattactattaaacttaa
aaataaacaccaagaattcacctggttaaatgtttatccttgaagagctg
tggaggaatgtaagaattacatctactctacggatgagagtggctctcta
actggctggcagttcattcggatttgtttaaaggtgaggcagcctgtgta
cagattaagccgcggcagctcagtatatgtatcacatcttcacaactgat
agctttaagtctgaccaattgtccctacttctaaaatagctaagtaacca
cctgtaagtaccagcaaacagtacgacaagcagccagaacgtgtctcaaa
ctgtttcaaagttttaatttgtaccctgtactgctgagtctttcctattg
tacagctcatgagacatcagccccaaacttcttttttttcttttttgtct
ccaacaaaatatttttattaattatttggcaactccatacaaatgtactc
taatcacactcatgtctcatttttcctggaatcctatatcaagtaaagaa
gatgctaaatatagttagttgttctggacagacatcccttacaaacctga
caactacaagtttcatcactatccaccggaaaaggatatgggaggtcaca
aaagtttagttctgtaaaattagaaattaactataaatagaataaatgcc
attaagtctttttttaggacttctctttttttatccacaagccaatggag
gatcacaatttttaccaagtggtaccacgggtcgcctcttccctctttct
aaagaaaacctttcaaaggatacttactttagtggggccggagag
gaattcatgaagagttacaacacaggttaggaacacctagtttcttatat
tttgactctaaaatagaattcggatagtttgatggccaacttaaagtatt
gcttttaccaacagtattaagttattctttttttttttttcttttggttt
tttgagacagggtttctctgtgtagccctggctgttctggaactcacttt
gtagaccaggctggcctcgaactcagaaatctgcctgcctctgcctcccg
agtgctgggattaaaggtgtgcaccaccacgttattcttatctgtagaat
tgaggagttttttaagatgctgtattttatatgctggtttaataaccatt
ttgtctcagcattttaagatacacacataatattgaggggtataaatatt
tagtctcactccccaacttaaaaaaaaaagaaagtaaattttcagtctcc
aaatatattggaaaataagatcttacagaaatgtgatttttcactgtaat
cttgatattatctttagtatcaacttatgtgtaaaaacctgttgaataat
ccagagcaaatacagaaatttgtctaaatttttctccagcttgagtctaa
gacatagaacagtgactaatacatgggagggggggatgttttaattctgt
gttgctgcaataacaaaccattctaaagcctaaatgacataaagcaaccg
tagtttattatttactgaatgggacccagctagatggctcatgaccacat
agtacgctaagctcctggcatttgtgttgatatttcagttggaggctaaa
acataacagatatggaccccctcatcatccaagagtcttctctttcccct
aaccccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_57222327_57223407
seq2: B6Ng01-248G06.b_46_1140

seq1  GAATTCACTCATTACTTCCTCCCACAAGCGCTTCCTCACCTTGTCCCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCATTACTTCCTCCCACAAGCGCTTCCTCACCTTGTCCCCAG  50

seq1  CCTGTAACAATTCATTTATTCCATTTACCTATTTGGAATAGTTCAAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAACAATTCATTTATTCCATTTACCTATTTGGAATAGTTCAAAGAA  100

seq1  ATGCAATCATGACCCATGACCTTTAATGCCTGCCTCTTCTGTTCGCATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAATCATGACCCATGACCTTTAATGCCTGCCTCTTCTGTTCGCATTA  150

seq1  TGTTTCCAGCTCTGCTCGTATTATGGTCTATGGACCAGCACATGCTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCAGCTCTGCTCGTATTATGGTCTATGGACCAGCACATGCTTTTA  200

seq1  CTGCCAAATATTCTTCCACTGCATGAGTATATCATATTTTCTTTACCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAAATATTCTTCCACTGCATGAGTATATCATATTTTCTTTACCATC  250

seq1  TGATGATGAAGTTGTTTCAAGTTGGATATTATGATTACTATTAAACTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGATGAAGTTGTTTCAAGTTGGATATTATGATTACTATTAAACTTAA  300

seq1  AAATAAACACCAAGAATTCACCTGGTTAAATGTTTATCCTTGAAGAGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAACACCAAGAATTCACCTGGTTAAATGTTTATCCTTGAAGAGCTG  350

seq1  TGGAGGAATGTAAGAATTACATCTACTCTACGGATGAGAGTGGCTCTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAATGTAAGAATTACATCTACTCTACGGATGAGAGTGGCTCTCTA  400

seq1  ACTGGCTGGCAGTTCATTCGGATTTGTTTAAAGGTGAGGCAGCCTGTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTGGCAGTTCATTCGGATTTGTTTAAAGGTGAGGCAGCCTGTGTA  450

seq1  CAGATTAAGCCGCGGCAGCTCAGTATATGTATCACATCTTCACAACTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTAAGCCGCGGCAGCTCAGTATATGTATCACATCTTCACAACTGAT  500

seq1  AGCTTTAAGTCTGACCAATTGTCCCTACTTCTAAAATAGCTAAGTAACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTAAGTCTGACCAATTGTCCCTACTTCTAAAATAGCTAAGTAACCA  550

seq1  CCTGTAAGTACCAGCAAACAGTACGACAAGCAGCCAGAACGTGTCTCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAAGTACCAGCAAACAGTACGACAAGCAGCCAGAACGTGTCTCAAA  600

seq1  CTGTTTCAAAGTTTTAATTTGTACCCTGTACTGCTGAGTCTTTCCTATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCAAAGTTTTAATTTGTACCCTGTACTGCTGAGTCTTTCCTATTG  650

seq1  TACAGCTCATGAGACATCAGCCCCAAACTTCTTTTTTTTCTTTTTTGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTCATGAGACATCAGCCCCAAACTTCTTTTTTTTCTTTTTTGTCT  700

seq1  CCAACAAAATATTTTTATTAATTATTTGGCAACTCCATACAAATGTACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAAAATATTTTTATTAATTATTTGGCAACTCCATACAAATGTACTC  750

seq1  TAATCACACTCATGTCTCATTTTTCCTGGAATCCTATATCAAGTAAAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCACACTCATGTCTCATTTTTCCTGGAATCCTATATCAAGTAAAGAA  800

seq1  GATGCTAAATATAGTTAGTTGTTCTGGACAGACATCCCTTACAAACCTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTAAATATAGTTAGTTGTTCTGGACAGACATCCCTTACAAACCTGA  850

seq1  CAACTACAAGTTTCATCACTATCCACCGGAAAAGGATAT-GGAGGTCACA  899
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CAACTACAAGTTTCATCACTATCCACCGGAAAAGGATATGGGAGGTCACA  900

seq1  AAAGTTTAGTTCTGTAAAATTAGAAATTAACTATAAATAGAATAAATGCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTAGTTCTGTAAAATTAGAAATTAACTATAAATAGAATAAATGCC  950

seq1  ATTAAGTCTTTTTT--AGACTTCTCTTTTTTTATCCACAAGCCA--TGAA  995
      ||||||||||||||   |||||||||||||||||||||||||||   || 
seq2  ATTAAGTCTTTTTTTAGGACTTCTCTTTTTTTATCCACAAGCCAATGGAG  1000

seq1  GATCACA--TTTTACCAAGTGGTACCCACGGTCG-CTC-TCCCTC-TTCT  1040
      |||||||  |||||||||||||||||   ||||| ||| |||||| ||||
seq2  GATCACAATTTTTACCAAGTGGTACCACGGGTCGCCTCTTCCCTCTTTCT  1050

seq1  -AAGAAAAACCTTCAAGGGATTACTAC-TTAGTGGG--CGGAGAG  1081
       ||||||| | ||||| ||||   ||| ||||||||  |||||||
seq2  AAAGAAAACCTTTCAAAGGATACTTACTTTAGTGGGGCCGGAGAG  1095

seq1: chr16_57388455_57389297
seq2: B6Ng01-248G06.g_63_918 (reverse)

seq1  GGGGTTAGGG--AAGAG-AGAC-CTTGGATGATGAGGGG--TCAT-TCTG  43
      ||||||||||  ||||| |||| ||||||||||||||||   ||| ||||
seq2  GGGGTTAGGGGAAAGAGAAGACTCTTGGATGATGAGGGGGTCCATATCTG  50

seq1  TTATGTTTTAGCAT-CAACTGAAATATCAACAC-AATGCCA-GAGCTTAG  90
      |||||||||||| | |||||||||||||||||| ||||||| ||||||||
seq2  TTATGTTTTAGCCTCCAACTGAAATATCAACACAAATGCCAGGAGCTTAG  100

seq1  CGTACTATGTGGTCATGAGCCATCTAGCT-GGTCCCATTCAGTAAATAAT  139
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CGTACTATGTGGTCATGAGCCATCTAGCTGGGTCCCATTCAGTAAATAAT  150

seq1  AAACTACGGTTGCTTTATGTCA-TTAGGCTTTAGAATGGTTTGTTA-TGC  187
      |||||||||||||||||||||| ||||||||||||||||||||||| |||
seq2  AAACTACGGTTGCTTTATGTCATTTAGGCTTTAGAATGGTTTGTTATTGC  200

seq1  AGCAACACAGAATTAAAACATCCCCCCCTCCCATGTATTAGTCACTGTTC  237
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACACAGAATTAAAACATCCCCCCCTCCCATGTATTAGTCACTGTTC  250

seq1  TATGTCTTAGACTCAAGCTGGAGAAAAATTTAGACAAATTTCTGTATTTG  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTTAGACTCAAGCTGGAGAAAAATTTAGACAAATTTCTGTATTTG  300

seq1  CTCTGGATTATTCAACAGGTTTTTACACATAAGTTGATACTAAAGATAAT  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGATTATTCAACAGGTTTTTACACATAAGTTGATACTAAAGATAAT  350

seq1  ATCAAGATTACAGTGAAAAATCACATTTCTGTAAGATCTTATTTTCCAAT  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGATTACAGTGAAAAATCACATTTCTGTAAGATCTTATTTTCCAAT  400

seq1  ATATTTGGAGACTGAAAATTTACTTTCTTTTTTTTTTAAGTTGGGGAGTG  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGGAGACTGAAAATTTACTTTCTTTTTTTTTTAAGTTGGGGAGTG  450

seq1  AGACTAAATATTTATACCCCTCAATATTATGTGTGTATCTTAAAATGCTG  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAAATATTTATACCCCTCAATATTATGTGTGTATCTTAAAATGCTG  500

seq1  AGACAAAATGGTTATTAAACCAGCATATAAAATACAGCATCTTAAAAAAC  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAATGGTTATTAAACCAGCATATAAAATACAGCATCTTAAAAAAC  550

seq1  TCCTCAATTCTACAGATAAGAATAACGTGGTGGTGCACACCTTTAATCCC  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAATTCTACAGATAAGAATAACGTGGTGGTGCACACCTTTAATCCC  600

seq1  AGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTG  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTG  650

seq1  GTCTACAAAGTGAGTTCCAGAACAGCCAGGGCTACACAGAGAAACCCTGT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACAAAGTGAGTTCCAGAACAGCCAGGGCTACACAGAGAAACCCTGT  700

seq1  CTCAAAAAACCAAAAGAAAAAAAAAAAAAGAATAACTTAATACTGTTGGT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAAAACCAAAAGAAAAAAAAAAAAAGAATAACTTAATACTGTTGGT  750

seq1  AAAAGCAATACTTTAAGTTGGCCATCAAACTATCCGAATTCTATTTTAGA  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAATACTTTAAGTTGGCCATCAAACTATCCGAATTCTATTTTAGA  800

seq1  GTCAAAATATAAGAAACTAGGTGTTCCTAACCTGTGTTGTAACTCTTCAT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAATATAAGAAACTAGGTGTTCCTAACCTGTGTTGTAACTCTTCAT  850

seq1  GAATTC  843
      ||||||
seq2  GAATTC  856