BAC Information

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BAC

Clone NameB6Ng01-248K14
Chromosome16 (Build37)
Map Location 56,648,992 - 56,795,829
singlet/doubletdoublet
Overlap geneAbi3bp, Tfg, Gpr128
Upstream geneNfkbiz, Gm1752, Lrriq2, EG667966, LOC629242, Rpl24, Zbtb11, Pcnp, Rg9mtd1, Senp7, Impg2, LOC672835
Downstream geneTmem45a, LOC668026, LOC668036, 2310005G13Rik, Tomm70a, Nit2, Tbc1d23, Tmem30c, 2610528E23Rik, 4631422O05Rik, Col8a1, LOC435480
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248K14.bB6Ng01-248K14.g
ACCGA056680GA056681
length397804
definitionB6Ng01-248K14.b B6Ng01-248K14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,795,427 - 56,795,829)(56,648,992 - 56,649,795)
sequence
ttttcatgttttataactatctctgttcgtgcagtgttttggcttcacca
tgcgttcctgtcgttcctgcaatgtccgggtactggtggctattgtgtgt
gggctactgacaggcattgttctgggactcggcatctggaggatggtcat
aaggatcaacagaggtaatgtcaccctgctataatctactgagacagaga
gtgggtgttgggggatggcattgattctctgactctgctacctgatattt
cagtgccagggaagtgccttgtccaggagatgcctgccttccacaacaca
acttaagaattgtaagaccgcagtccgttgatgaccagtggacagcttta
tacatagaacgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtg
gaattccccaaaacaccaagtggaaagggcaagagtttggtatcggggtg
gattttcttcaagtttatgaattactgatcttttcctatattacataaat
aaataaaaatatgagattttcaaattcctctggaattttttttttcttta
agcttatgagcactctgatcaggctggcctggaactcatagagatcttgt
tgcctctgcctcccagatgctggcattaaaggcgtgtgccaccatgccta
gtttgagtcaagtctttattcgactagtcatgttccaaattccagaactg
taattgactgctgtaaattctagagtaaaaaccaatgcggcatatggatg
aaaccagccctctttccccaatcaaaacagagaaagtccattctagacaa
cctaacttaggttgtgcttggctgcctcaaggtgtgaaggttgcttcatc
atcattgtgaggcagagttcctgcctaaatcttaatttttaaagcttcca
gcaggatgcaaggaaatcacactatctaccaaagagatgctggtgtcttg
caaatcctcagtgtgaaaggaaagctttgcattaagaaagtaggcctagg
atctgcaaccctataggtggaacaacaatatgaactaaccagtaccccgg
agctcttgactctagctgcatatgtatcaaaagatggcctagtcggccat
cactggaaagagaggcccattggacacacaaactttatatgccccagtac
aggggaacgccagggccaaaaaaatgggaatgggtgggtagggaagtggg
gggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_56795427_56795829
seq2: B6Ng01-248K14.b_51_453 (reverse)

seq1  CACACACACACACACACACACATACACACACACACACGTTCTATGTATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACATACACACACACACACGTTCTATGTATAA  50

seq1  AGCTGTCCACTGGTCATCAACGGACTGCGGTCTTACAATTCTTAAGTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCCACTGGTCATCAACGGACTGCGGTCTTACAATTCTTAAGTTGT  100

seq1  GTTGTGGAAGGCAGGCATCTCCTGGACAAGGCACTTCCCTGGCACTGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGGAAGGCAGGCATCTCCTGGACAAGGCACTTCCCTGGCACTGAAA  150

seq1  TATCAGGTAGCAGAGTCAGAGAATCAATGCCATCCCCCAACACCCACTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGGTAGCAGAGTCAGAGAATCAATGCCATCCCCCAACACCCACTCT  200

seq1  CTGTCTCAGTAGATTATAGCAGGGTGACATTACCTCTGTTGATCCTTATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCAGTAGATTATAGCAGGGTGACATTACCTCTGTTGATCCTTATG  250

seq1  ACCATCCTCCAGATGCCGAGTCCCAGAACAATGCCTGTCAGTAGCCCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCCTCCAGATGCCGAGTCCCAGAACAATGCCTGTCAGTAGCCCACA  300

seq1  CACAATAGCCACCAGTACCCGGACATTGCAGGAACGACAGGAACGCATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATAGCCACCAGTACCCGGACATTGCAGGAACGACAGGAACGCATGG  350

seq1  TGAAGCCAAAACACTGCACGAACAGAGATAGTTATAAAACATGAAAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCCAAAACACTGCACGAACAGAGATAGTTATAAAACATGAAAAGAA  400

seq1  TTC  403
      |||
seq2  TTC  403

seq1: chr16_56648992_56649795
seq2: B6Ng01-248K14.g_65_868

seq1  GAATTCCCCAAAACACCAAGTGGAAAGGGCAAGAGTTTGGTATCGGGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCAAAACACCAAGTGGAAAGGGCAAGAGTTTGGTATCGGGGTG  50

seq1  GATTTTCTTCAAGTTTATGAATTACTGATCTTTTCCTATATTACATAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCTTCAAGTTTATGAATTACTGATCTTTTCCTATATTACATAAAT  100

seq1  AAATAAAAATATGAGATTTTCAAATTCCTCTGGAATTTTTTTTTTCTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAAATATGAGATTTTCAAATTCCTCTGGAATTTTTTTTTTCTTTA  150

seq1  AGCTTATGAGCACTCTGATCAGGCTGGCCTGGAACTCATAGAGATCTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTATGAGCACTCTGATCAGGCTGGCCTGGAACTCATAGAGATCTTGT  200

seq1  TGCCTCTGCCTCCCAGATGCTGGCATTAAAGGCGTGTGCCACCATGCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTGCCTCCCAGATGCTGGCATTAAAGGCGTGTGCCACCATGCCTA  250

seq1  GTTTGAGTCAAGTCTTTATTCGACTAGTCATGTTCCAAATTCCAGAACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGTCAAGTCTTTATTCGACTAGTCATGTTCCAAATTCCAGAACTG  300

seq1  TAATTGACTGCTGTAAATTCTAGAGTAAAAACCAATGCGGCATATGGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGACTGCTGTAAATTCTAGAGTAAAAACCAATGCGGCATATGGATG  350

seq1  AAACCAGCCCTCTTTCCCCAATCAAAACAGAGAAAGTCCATTCTAGACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGCCCTCTTTCCCCAATCAAAACAGAGAAAGTCCATTCTAGACAA  400

seq1  CCTAACTTAGGTTGTGCTTGGCTGCCTCAAGGTGTGAAGGTTGCTTCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACTTAGGTTGTGCTTGGCTGCCTCAAGGTGTGAAGGTTGCTTCATC  450

seq1  ATCATTGTGAGGCAGAGTTCCTGCCTAAATCTTAATTTTTAAAGCTTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGTGAGGCAGAGTTCCTGCCTAAATCTTAATTTTTAAAGCTTCCA  500

seq1  GCAGGATGCAAGGAAATCACACTATCTACCAAAGAGATGCTGGTGTCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGATGCAAGGAAATCACACTATCTACCAAAGAGATGCTGGTGTCTTG  550

seq1  CAAATCCTCAGTGTGAAAGGAAAGCTTTGCATTAAGAAAGTAGGCCTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCCTCAGTGTGAAAGGAAAGCTTTGCATTAAGAAAGTAGGCCTAGG  600

seq1  ATCTGCAACCCTATAGGTGGAACAACAATATGAACTAACCAGTACCCCGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCAACCCTATAGGTGGAACAACAATATGAACTAACCAGTACCCCGG  650

seq1  AGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCAT  700

seq1  CACTGGAAAGAGAGGCCCATTGGACACACAAACTTTATATGCCCCAGTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGAAAGAGAGGCCCATTGGACACACAAACTTTATATGCCCCAGTAC  750

seq1  AGGGGAACGCCAGGGCCAAAAAAATGGGAATGGGTGGGTAGGGAAGTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAACGCCAGGGCCAAAAAAATGGGAATGGGTGGGTAGGGAAGTGGG  800

seq1  GGGG  804
      ||||
seq2  GGGG  804