BAC Information

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BAC

Clone NameB6Ng01-248O02
Chromosome16 (Build37)
Map Location 83,571,902 - 83,709,999
singlet/doubletdoublet
Overlap genenone
Upstream geneEG545172, LOC100039572
Downstream geneEG621729, LOC640489, LOC665664, LOC547311, LOC100039893, LOC100039634
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248O02.bB6Ng01-248O02.g
ACCGA056843GA056844
length1,1541,044
definitionB6Ng01-248O02.b B6Ng01-248O02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,708,859 - 83,709,999)(83,571,902 - 83,572,953)
sequence
gaattcttactatcaaatcttttcagaaatttagccataacattgctctt
aataacatatatttataataagataaggaaaatacatcaaagaatcatac
tggaaatagaaaaagtattttataaagtagaaccaaattgaatagaaaat
gcacaaaataccaagtgtacaacttgtatgcttttcagcagttttctttg
ttcagccatatgctctctgtttcaataatgtatttaccatatactctata
gaagtatagacgtaagtatatacttacataagtatagaagtaagacataa
gtatagaagtaagatatttcaagtctgacaattaaaaggatttaagtatt
aatatgtctgcaaatggtttcctcatcccgtgattgctactgtttgaaag
aaaattcatatacccaatatattgttataatatccctctttcactttgtt
actgtttttctctttcttcctttctctcttttagtttttttaattcttct
gtttcccaataagcaggtgaattctttccaagcaagtgtttattcatgtg
tgaagcattttcaaatcactctacctttctttgcttaccctttgattaga
gaaaaataaagctttattgtctcaagataatgtctatattctatttttat
acttccaattgttttctaacttactcatatggacaaggaaacttgcagtg
agttaaatttgtgattgtatcttctcaatgactgtctcaacttgattcta
aaattccattttttaaatacaccaataatagaactgagatttttaactta
gatctttccctactttaagtccagtgaatccacaatcaagtctcttaaac
ttgtatttttaaaattgctgtcaattatatatggtaatttctataaccta
agataatttgattgttttacaactacactttaagagaacatttgttattt
tattgcttttaaatacttgatcctcattagtgtatcacatttactatatt
attataaccttaatacttatttcaatatcagtcccattactctatatgaa
atgaagttttatctaacataattgacacaattgggcacatttgtatttta
gtcttatgcatttacttcagcttatttctaccttaataccggagtgagcc
tatt

gaattcaagaacagctcctgggagtgtttcacgtttacaaaagtcttcca
ccagcacccccaaatcccaccacaacattcactgggaagctctgggcact
tggaaggatccatgcctttttgctcctcataagcagatctctcagctgtg
gttctgtttgccggtctttaatgacaccaagcatttgttggctatagcac
cagttctctaaagggtcaaagaatggaggcttacagggtttttgttggag
tccttcatttgttttacagtagatttcatggtgacaataaaagcaatatt
ggaagtaaaatgaaaggaatatttttccaaaccagaaagtcctactattt
catattctttccatcttttattggcttatattttctttctatagttagaa
gatagtgttttctaacttcgttgtatttcaaaaatacagtggaaatgatt
agtactaagtagtttgaaattcagagaatgtattttcattaaaaatttat
acttaattgaacttttagaaccaatgaatgatcacatcacatgcagaaaa
tgatcttttcctctgtttgcctgacaatccatgccaaatgtactttttct
acctagtgaccattgcatgtcattcaaaaataagaaaagtcctaaaagtt
tttataaaacttgttcctcacacatttttgatattatacatacattctta
tagttggttctcaacctcattgaaatttttgccatagtttatatctggaa
tcatgttttcttggttgatatacagtatcttattggaattattaaactgc
taaccatcatccagcacagatacaagccaatgtcctgtggttcacagaaa
gtatttccttggtattgacttctgagactcctgcttattgttattaaaat
ccaaagtaagtatttattttatgtactattttttagttataaaacataaa
tattccagtgattcacatgttttaaatgattttcctttttattatttact
tttggtgcatgtaagttagtttagtagatcactctaaatgtttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_83708859_83709999
seq2: B6Ng01-248O02.b_46_1199 (reverse)

seq1  AATA-GCTCACT-CTGTATTAAGGTAG-AATAAGCTGAAAGTAATGCAT-  46
      |||| ||||||| | |||||||||||| |||||||||||   ||||||| 
seq2  AATAGGCTCACTCCGGTATTAAGGTAGAAATAAGCTGAAGTAAATGCATA  50

seq1  AGACT-AAATACAAATGTGCCCA--TGTGTCAAATTATG-TAGATAAAAC  92
      ||||| |||||||||||||||||  |||||| ||||||| ||||||||||
seq2  AGACTAAAATACAAATGTGCCCAATTGTGTC-AATTATGTTAGATAAAAC  99

seq1  TTCATTTCATATAGAGTAAT-GGACTGATTATGAAATAAGTATTAAGGTT  141
      |||||||||||||||||||| ||||||||  |||||||||||||||||||
seq2  TTCATTTCATATAGAGTAATGGGACTGATATTGAAATAAGTATTAAGGTT  149

seq1  ATAATAATATAGT-AATGTGATACACTAATGA-GATCAAGTATTTAAAAG  189
      ||||||||||||| |||||||||||||||||| |||||||||||||||||
seq2  ATAATAATATAGTAAATGTGATACACTAATGAGGATCAAGTATTTAAAAG  199

seq1  CA--TAAATAACAAATGTTCTCTT-AAGTGTAGTTGTAAAACAATCAAAT  236
      ||   ||||||||||||||||||| |||||||||||||||||||||||||
seq2  CAATAAAATAACAAATGTTCTCTTAAAGTGTAGTTGTAAAACAATCAAAT  249

seq1  TATCTTAGGTTATAGAAATTACCATATATAATTGACAGCAATTTTAAAAA  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTAGGTTATAGAAATTACCATATATAATTGACAGCAATTTTAAAAA  299

seq1  TACAAGTTTAAGAGACTTGATTGTGGATTCACTGGACTTAAAGTAGGGAA  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGTTTAAGAGACTTGATTGTGGATTCACTGGACTTAAAGTAGGGAA  349

seq1  AGATCTAAGTTAAAAATCTCAGTTCTATTATTGGTGTATTTAAAAAATGG  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTAAGTTAAAAATCTCAGTTCTATTATTGGTGTATTTAAAAAATGG  399

seq1  AATTTTAGAATCAAGTTGAGACAGTCATTGAGAAGATACAATCACAAATT  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAGAATCAAGTTGAGACAGTCATTGAGAAGATACAATCACAAATT  449

seq1  TAACTCACTGCAAGTTTCCTTGTCCATATGAGTAAGTTAGAAAACAATTG  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCACTGCAAGTTTCCTTGTCCATATGAGTAAGTTAGAAAACAATTG  499

seq1  GAAGTATAAAAATAGAATATAGACATTATCTTGAGACAATAAAGCTTTAT  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTATAAAAATAGAATATAGACATTATCTTGAGACAATAAAGCTTTAT  549

seq1  TTTTCTCTAATCAAAGGGTAAGCAAAGAAAGGTAGAGTGATTTGAAAATG  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTAATCAAAGGGTAAGCAAAGAAAGGTAGAGTGATTTGAAAATG  599

seq1  CTTCACACATGAATAAACACTTGCTTGGAAAGAATTCACCTGCTTATTGG  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACACATGAATAAACACTTGCTTGGAAAGAATTCACCTGCTTATTGG  649

seq1  GAAACAGAAGAATTAAAAAAACTAAAAGAGAGAAAGGAAGAAAGAGAAAA  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGAAGAATTAAAAAAACTAAAAGAGAGAAAGGAAGAAAGAGAAAA  699

seq1  ACAGTAACAAAGTGAAAGAGGGATATTATAACAATATATTGGGTATATGA  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAACAAAGTGAAAGAGGGATATTATAACAATATATTGGGTATATGA  749

seq1  ATTTTCTTTCAAACAGTAGCAATCACGGGATGAGGAAACCATTTGCAGAC  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTTCAAACAGTAGCAATCACGGGATGAGGAAACCATTTGCAGAC  799

seq1  ATATTAATACTTAAATCCTTTTAATTGTCAGACTTGAAATATCTTACTTC  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAATACTTAAATCCTTTTAATTGTCAGACTTGAAATATCTTACTTC  849

seq1  TATACTTATGTCTTACTTCTATACTTATGTAAGTATATACTTACGTCTAT  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTATGTCTTACTTCTATACTTATGTAAGTATATACTTACGTCTAT  899

seq1  ACTTCTATAGAGTATATGGTAAATACATTATTGAAACAGAGAGCATATGG  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTATAGAGTATATGGTAAATACATTATTGAAACAGAGAGCATATGG  949

seq1  CTGAACAAAGAAAACTGCTGAAAAGCATACAAGTTGTACACTTGGTATTT  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACAAAGAAAACTGCTGAAAAGCATACAAGTTGTACACTTGGTATTT  999

seq1  TGTGCATTTTCTATTCAATTTGGTTCTACTTTATAAAATACTTTTTCTAT  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATTTTCTATTCAATTTGGTTCTACTTTATAAAATACTTTTTCTAT  1049

seq1  TTCCAGTATGATTCTTTGATGTATTTTCCTTATCTTATTATAAATATATG  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTATGATTCTTTGATGTATTTTCCTTATCTTATTATAAATATATG  1099

seq1  TTATTAAGAGCAATGTTATGGCTAAATTTCTGAAAAGATTTGATAGTAAG  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAGAGCAATGTTATGGCTAAATTTCTGAAAAGATTTGATAGTAAG  1149

seq1  AATTC  1141
      |||||
seq2  AATTC  1154


seq1: chr16_83571902_83572953
seq2: B6Ng01-248O02.g_66_1109

seq1  GAATTCAAGAACAGCTCCTGGGAGTGTTTCACGTTTACAAAAGTCTTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAACAGCTCCTGGGAGTGTTTCACGTTTACAAAAGTCTTCCA  50

seq1  CCAGCACCCCCAAATCCCACCACAACATTCACTGGGAAGCTCTGGGCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACCCCCAAATCCCACCACAACATTCACTGGGAAGCTCTGGGCACT  100

seq1  TGGAAGGATCCATGCCTTTTTGCTCCTCATAAGCAGATCTCTCAGCTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGATCCATGCCTTTTTGCTCCTCATAAGCAGATCTCTCAGCTGTG  150

seq1  GTTCTGTTTGCCGGTCTTTAATGACACCAAGCATTTGTTGGCTATAGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTTTGCCGGTCTTTAATGACACCAAGCATTTGTTGGCTATAGCAC  200

seq1  CAGTTCTCTAAAGGGTCAAAGAATGGAGGCTTACAGGGTTTTTGTTGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTCTAAAGGGTCAAAGAATGGAGGCTTACAGGGTTTTTGTTGGAG  250

seq1  TCCTTCATTTGTTTTACAGTAGATTTCATGGTGACAATAAAAGCAATATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCATTTGTTTTACAGTAGATTTCATGGTGACAATAAAAGCAATATT  300

seq1  GGAAGTAAAATGAAAGGAATATTTTTCCAAACCAGAAAGTCCTACTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTAAAATGAAAGGAATATTTTTCCAAACCAGAAAGTCCTACTATTT  350

seq1  CATATTCTTTCCATCTTTTATTGGCTTATATTTTCTTTCTATAGTTAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCTTTCCATCTTTTATTGGCTTATATTTTCTTTCTATAGTTAGAA  400

seq1  GATAGTGTTTTCTAACTTCGTTGTATTTCAAAAATACAGTGGAAATGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTGTTTTCTAACTTCGTTGTATTTCAAAAATACAGTGGAAATGATT  450

seq1  AGTACTAAGTAGTTTGAAATTCAGAGAATGTATTTTCATTAAAAATTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTAAGTAGTTTGAAATTCAGAGAATGTATTTTCATTAAAAATTTAT  500

seq1  ACTTAATTGAACTTTTAGAACCAATGAATGATCACATCACATGCAGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAATTGAACTTTTAGAACCAATGAATGATCACATCACATGCAGAAAA  550

seq1  TGATCTTTTCCTCTGTTTGCCTGACAATCCATGCCAAATGTACTTTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTTTTCCTCTGTTTGCCTGACAATCCATGCCAAATGTACTTTTTCT  600

seq1  ACCTAGTGACCATTGCATGTCATTCAAAAATAAGAAAAGTCCTAAAAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGTGACCATTGCATGTCATTCAAAAATAAGAAAAGTCCTAAAAGTT  650

seq1  TTTATAAAACTTGTTCCTCACACATTTTTGATATTATACATACATTCTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAAACTTGTTCCTCACACATTTTTGATATTATACATACATTCTTA  700

seq1  TAGTTGGTTCTCAACCTCATTGAAATTTTTGCCATAGTTTATATCTGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGGTTCTCAACCTCATTGAAATTTTTGCCATAGTTTATATCTGGAA  750

seq1  TCATGTTTTCTTGGTTGATATACAGTATCTTATTGGAATTATTAAACTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTTTCTTGGTTGATATACAGTATCTTATTGGAATTATTAAACTGC  800

seq1  TAACCATCATCCAGCACAGATACAAGCCAATGTCCTGTGGTTCACAGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCATCATCCAGCACAGATACAAGCCAATGTCCTGTGGTTCACAGAAA  850

seq1  GTATTTCCTTGGTATTGACTTCTGAGACTCCTGCTTATTGTTATTAAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCCTTGGTATTGACTTCTGAGACTCCTGCTTATTGTTATTAAAAT  900

seq1  CCAAAGTAAGTATTTATTTTATGTACTA-TTTTTAGTTAT-AAACATAAA  948
      |||||||||||||||||||||||||||| ||||||||||| |||||||||
seq2  CCAAAGTAAGTATTTATTTTATGTACTATTTTTTAGTTATAAAACATAAA  950

seq1  TATTCCAGTGATTCACATGTTTTAAAATTGATTTTCCCTTTTTATTATTT  998
      ||||||||||||||||||||||||||  ||||||| ||||||||||| ||
seq2  TATTCCAGTGATTCACATGTTTTAAA--TGATTTT-CCTTTTTATTA-TT  996

seq1  TACTTTTTGGTGCATGGTAAGTTTAGTTTTAGTAGATTCACTCTAAAATG  1048
      ||| ||||||||||| ||||| |||| ||||||||| ||||||| |||||
seq2  TAC-TTTTGGTGCAT-GTAAG-TTAG-TTTAGTAGA-TCACTCT-AAATG  1040

seq1  TTTG  1052
      ||||
seq2  TTTG  1044


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