BAC Information

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BAC

Clone NameB6Ng01-250A07
Chromosome16 (Build37)
Map Location 58,147,414 - 58,284,726
singlet/doubletdoublet
Overlap geneLOC100043477
Upstream geneTomm70a, Nit2, Tbc1d23, Tmem30c, 2610528E23Rik, 4631422O05Rik, Col8a1, LOC435480, LOC629342
Downstream geneDcbld2, St3gal6, LOC100043480, Gm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195, Olfr196, Olfr197, Olfr198, Olfr199, Olfr200-ps1, Olfr201, Olfr202
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250A07.bB6Ng01-250A07.g
ACCGA057681GA057682
length1,1641,106
definitionB6Ng01-250A07.b B6Ng01-250A07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,147,414 - 58,148,608)(58,284,157 - 58,284,726)
sequence
gaattccttgctactctagtgagatttacttacatattgatcactctcat
tgaatagtgaagctgatatcttgctaataattgaaaggaagaaaagattt
gtagtaaactttatagaaggttactggctacgagcaagttgttccacata
aatgagattacactaaaatgcataaatgagtagacagtaaaaagttgaat
atgtttgaaaatagtgaacaaaacacatttagctgaaatagttgccaaaa
atagtttgtgtccaatgaaaaaaccataatatagctgaaagatttatgaa
taagatatacttgaaaatgtcataataattacttcacattagaccacgcc
taataattaacagtcaatctttaaacaactacgtcatctaggattatgta
catcaacttggtgttgtgaagttcaagtctgtgtctgagcaaagggaccc
tttagctgtcttctgtgtcagaggtgacactgtccataccactgcatttt
attctaatactttttctttcttctatgattttgttttgtttaaagaatgc
gttttgaaatgtctgtccccagcttgctgtattaaagtagtctgttgcct
ctcttctagtaattaagatcttatgacttttatttcttcttggtgtttcc
cttaaaactttaaattctttctaaaaagtaaagacttgactcacatgctt
tctcttttcctaagtgatatagaaatgatcgctggctggacagaagagca
agatgtcttccaagaaaaacaaaatgcctactccccctcacagaaaagat
tgaaacagtgaatacacacttgttctaccactggagcatccgaaggagca
ttcagggtccagtgaaaggtgacaaagctactctggatccgggaaactca
gaacgcacagagaagggaaacaaaatcctctgccgccactgcgccaactc
ttccattacaaagtccttggacaagagatgtctctgaaagaaaagtagtg
gaagcaccaaacgctctattaaactgcagagacttagatcttgctcctga
gaccctggagcctcacaaccctggagtcagctatgcactgttcacatgta
cttgctcttaacaggatccatgttctgtccttccttcgaggcagtccaca
tgggtatcattctg
gaattcaataaaaatctttaatttatttcttctctgaaccagtggtcatt
gaatagaggtgttcagttgctgtgagtttgtaagctttctgttgtttgtg
ttgttgttaaaatccagccttaattcatggtggtctgataagatacaagt
agttattccaatcttcttgcatctgttgaagcttgctttgtgactgagta
catgatcagctttggagaaggttctgtgaagtgcagagaagaaggtatgt
tctttcatgtttgtatgaagtgttctgtagatgtctattaggcccatttg
attcatatcctctgttagtgtcactatttctctatttagttctgtctcaa
tgacctttctgcttgtgagagtggggtgttgaagtctctcactatgaatg
tgtggtgttcaatgtatgatttaagctttagtaatgtttcttttatgaat
ttgggtgtctttgcatttgtggcatagatattcagaattgagatgtcatc
tttgtggatttctttctttgatgagtatgaggtggccttctttatctctt
ttgattacttttcattgaaagtctaagtagctagttagaaaaaaaaatgt
aaattttttttcctagatcttaggggctcttcacctagcccagtgcctca
aagactgttttgtttggaattgcaaaggagtaagatcctataaggggaaa
gagagtctccccagtaaaagtgtcattttctctagtgtctttggccctgg
tgttcagagagaacgccactatgtactcactatgttgcatagagactaca
tcctggcagccaaaccctgtttaaccttggaaatcaaacacagatgcatt
tcccaagaattgtcattaattccttgtttcattagacaggtcctggagtt
tgggtttctctttggtaaagtgagaacaacctttctcattttgtcagaat
aaataggtgagaaaaaaataaaccaataagtgctgcactttgcagttgac
cacattcattaagttcagattgacttatttctaaaatgttattatcttta
ttagaaatactacaagggaaactctgaattagaatcaagaaaatatttgg
cttaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_58147414_58148608
seq2: B6Ng01-250A07.b_46_1209

seq1  GAATTCCTTGCTACTCTAGTGAGATTTACTTACATATTGATCACTCTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGCTACTCTAGTGAGATTTACTTACATATTGATCACTCTCAT  50

seq1  TGAATAGTGAAGCTGATATCTTGCTAATAATTGAAAGGAAGAAAAGATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGTGAAGCTGATATCTTGCTAATAATTGAAAGGAAGAAAAGATTT  100

seq1  GTAGTAAACTTTATAGAAGGTTACTGGCTACGAGCAAGTTGTTCCACATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAAACTTTATAGAAGGTTACTGGCTACGAGCAAGTTGTTCCACATA  150

seq1  AATGAGATTACACTAAAATGCATAAATGAGTAGACAGTAAAAAGTTGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGATTACACTAAAATGCATAAATGAGTAGACAGTAAAAAGTTGAAT  200

seq1  ATGTTTGAAAATAGTGAACAAAACACATTTAGCTGAAATAGTTGCCAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGAAAATAGTGAACAAAACACATTTAGCTGAAATAGTTGCCAAAA  250

seq1  ATAGTTTGTGTCCAATGAAAAAACCATAATATAGCTGAAAGATTTATGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTGTGTCCAATGAAAAAACCATAATATAGCTGAAAGATTTATGAA  300

seq1  TAAGATATACTTGAAAATGTCATAATAATTACTTCACATTAGACCACGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATATACTTGAAAATGTCATAATAATTACTTCACATTAGACCACGCC  350

seq1  TAATAATTAACAGTCAATCTTTAAACAACTACGTCATCTAGGATTATGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATTAACAGTCAATCTTTAAACAACTACGTCATCTAGGATTATGTA  400

seq1  CATCAACTTGGTGTTGTGAAGTTCAAGTCTGTGTCTGAGCAAAGGGACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAACTTGGTGTTGTGAAGTTCAAGTCTGTGTCTGAGCAAAGGGACCC  450

seq1  TTTAGCTGTCTTCTGTGTCAGAGGTGACACTGTCCATACCACTGCATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTGTCTTCTGTGTCAGAGGTGACACTGTCCATACCACTGCATTTT  500

seq1  ATTCTAATACTTTTTCTTTCTTCTATGATTTTGTTTTGTTTAAAGAATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAATACTTTTTCTTTCTTCTATGATTTTGTTTTGTTTAAAGAATGC  550

seq1  GTTTTGAAATGTCTGTCCCCAGCTTGCTGTATTAAAGTAGTCTGTTGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGAAATGTCTGTCCCCAGCTTGCTGTATTAAAGTAGTCTGTTGCCT  600

seq1  CTCTTCTAGTAATTAAGATCTTATGACTTTTATTTCTTCTTGGTGTTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTAGTAATTAAGATCTTATGACTTTTATTTCTTCTTGGTGTTTCC  650

seq1  CTTAAAACTTTAAATTCTTTCTAAAAAGTAAAGACTTGACTCACATGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAACTTTAAATTCTTTCTAAAAAGTAAAGACTTGACTCACATGCTT  700

seq1  TCTCTTTTCCTAAGTGATATAGAAATGATCGCTGGCTGGACAGAAGAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTTCCTAAGTGATATAGAAATGATCGCTGGCTGGACAGAAGAGCA  750

seq1  AGATGTCTTCCAAGAAAAACAAAATGCCTACTCCCCCTCACAGAAAAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTCTTCCAAGAAAAACAAAATGCCTACTCCCCCTCACAGAAAAGAT  800

seq1  TGAAACAGTGAATACACACTTGTTCTACCACTGGAGCATCCGAAGGAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACAGTGAATACACACTTGTTCTACCACTGGAGCATCCGAAGGAGCA  850

seq1  TTCAGGGTCCAGTG-AAGGTGACAAAGCTACTCTGGATCCGGGAAACTCA  899
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTCAGGGTCCAGTGAAAGGTGACAAAGCTACTCTGGATCCGGGAAACTCA  900

seq1  GAACGCACAGAGAAGGGAAACAAAATCCTCTGCCGCCACTGCGCCAACTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGCACAGAGAAGGGAAACAAAATCCTCTGCCGCCACTGCGCCAACTC  950

seq1  TTCCATTACAAAGTCCTTGGAACCAAGAAGGATGTCTCCTGAAAGGAAAA  999
      |||||||||||||||||||||  |||||  ||||||| |||||||  |||
seq2  TTCCATTACAAAGTCCTTGGA--CAAGA--GATGTCT-CTGAAAG--AAA  993

seq1  AGTAAGTGGAAGGCAACCAAACGGCCTCTATTAAAACTGCAGAGACTTAG  1049
      ||| ||||||||   ||||||||  ||||||| |||||||||||||||||
seq2  AGT-AGTGGAAG--CACCAAACG--CTCTATT-AAACTGCAGAGACTTAG  1037

seq1  AATCTTTGCTCCTGGAGGACCCTGGAGCCTCACAACCCCTGAGTCAAGGC  1099
       ||| |||||||||   |||||||||||||||||||||  ||||||  ||
seq2  -ATC-TTGCTCCTG--AGACCCTGGAGCCTCACAACCCTGGAGTCA--GC  1081

seq1  TATGCACTGTGCACATGGTTACTTTGCTCTAAACAAGGAGCCCATGTCCT  1149
      |||||||||| ||||||  ||| ||||||| ||| ||||  |||||| ||
seq2  TATGCACTGTTCACATG--TAC-TTGCTCTTAAC-AGGA-TCCATGTTCT  1126

seq1  GTCGCTTCTCTCGAAAGCCACGTGCCCACTGTGGGGTATCATTCTG  1195
      ||| ||||  |||  || ||   | ||||    |||||||||||||
seq2  GTC-CTTCCTTCG--AGGCA---GTCCAC--ATGGGTATCATTCTG  1164

seq1: chr16_58284157_58284726
seq2: B6Ng01-250A07.g_614_1176 (reverse)

seq1  TTTAAGCC-AATATTTTCTTGTATTCTAATTTCCAGTTTTTCCCTTTGTA  49
      |||||||| |||||||||||| |||||||||  |||  |||||| |||||
seq2  TTTAAGCCAAATATTTTCTTG-ATTCTAATT--CAGAGTTTCCC-TTGTA  46

seq1  GTATTTCTAATAAAGATAATAACATTTTAGAAATAAGTCAATTCTTGGAA  99
      ||||||||||||||||||||||||||||||||||||||||| |||  |||
seq2  GTATTTCTAATAAAGATAATAACATTTTAGAAATAAGTCAA-TCT--GAA  93

seq1  CTTAATGAATGTGTTCAACTGCAAAGTGCAGCACTTATTGGTTTTATTTT  149
      ||||||||||||| ||||||||||||||||||||||||||||||   |||
seq2  CTTAATGAATGTGGTCAACTGCAAAGTGCAGCACTTATTGGTTT--ATTT  141

seq1  TTTTCTCACCTATTTATTCTGAC-AAATGAGAAAGGTTG-TCTCACTTTA  197
      ||||||||||||||||||||||| ||||||||||||||| ||||||||||
seq2  TTTTCTCACCTATTTATTCTGACAAAATGAGAAAGGTTGTTCTCACTTTA  191

seq1  CCAAAAGAGAAA-CCAAACTCCAGGACCTGTCTAATGAAACAAGGAATTA  246
      || ||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CC-AAAGAGAAACCCAAACTCCAGGACCTGTCTAATGAAACAAGGAATTA  240

seq1  ATGACAATTCTTGGGAAATGCATCTGTGTTTGATTTCCAAGGTTTAAACA  296
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATGACAATTCTTGGGAAATGCATCTGTGTTTGATTTCCAAGG-TTAAACA  289

seq1  GGGTTTGGCTGCCAGGATGTAGTCTCTATGCAACATAGTGAGTACATAGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGGCTGCCAGGATGTAGTCTCTATGCAACATAGTGAGTACATAGT  339

seq1  GGCGTTCTCTCTGAACACCAGGGCCAAAGACACTAGAGAAAATGACACTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTTCTCTCTGAACACCAGGGCCAAAGACACTAGAGAAAATGACACTT  389

seq1  TTACTGGGGAGACTCTCTTTCCCCTTATAGGATCTTACTCCTTTGCAATT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGGGGAGACTCTCTTTCCCCTTATAGGATCTTACTCCTTTGCAATT  439

seq1  CCAAACAAAACAGTCTTTGAGGCACTGGGCTAGGTGAAGAGCCCCTAAGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACAAAACAGTCTTTGAGGCACTGGGCTAGGTGAAGAGCCCCTAAGA  489

seq1  TCTAGGAAAAAAAATTTACATTTTTTTTTCTAACTAGCTACTTAGACTTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGAAAAAAAATTTACATTTTTTTTTCTAACTAGCTACTTAGACTTT  539

seq1  CAATGAAAAGTAATCAAAAGAGAT  570
      ||||||||||||||||||||||||
seq2  CAATGAAAAGTAATCAAAAGAGAT  563