BAC Information

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BAC

Clone NameB6Ng01-250I06
Chromosome16 (Build37)
Map Location 71,724,031 - 71,725,150
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039231
Downstream geneRobo1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250I06.bB6Ng01-250I06.g
ACCGA058039GA058040
length1,111695
definitionB6Ng01-250I06.b B6Ng01-250I06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactaagtggcactgattctccattgcagattcagatatgtccat
cagaaggacgcctagttcaaatcatggattaagaaaattctatatttgaa
cccaagaagaatattactattggtgctgtgaataacccatctttgaaaaa
aaagtgcattgtattctcaaatctaggaaatttaaagatatatttatgaa
atgatatcttaaatttaaaattataatcaaaatgtatattaagattgata
gaacatctcatgtttacaatataaaatacattttgagtttctagagtatt
gtataatgaaaaatgtcttgtgataaattaaattagaaagagtgttacac
atttatattatcttatgatatttaatacattgataaggcttattatcaca
tgaataaccatcccctcaattaaaaaacaattgagcatttatttttctaa
cataagattagctgcacatgccttggtattgaagtatgtgaagaagactg
atgctaggcaaagtttagtataaatgggttttgaaatgcttgcatattta
taatcaagaagatgacatcctgtaggatatataaaccatagatgtacact
gatatctaatgacaacaatcagtgcagcttccaaatagcaccttcatcgt
gttccagaggtgctttattataatacaaattaggaagcagcatgatctgt
aaaaaacactgtaaaatgaatggatataaaatatgttataagcaccagga
aaaaatattagtgaatgtattcataaattctctattactataaaatgaca
aggtgaccaaaggttacgtatataagaaagtatttaatttgaggagtggt
gtttcagagggtagcagactcctttaatacatgagtgtgtagctgtggct
gagatttttcatgttgagtcaacaaccaaaaagtagagaaaggctaacta
ggagctgcattgggcttgtacatttcaaggcccacctcaagtcacatacc
taccaaacaggaccacactaccaatcatttccaatgagtcagcactgtag
atgaataaaatttaatatatatgagcatatgggggcactttctcatcaat
accacgtgcta

gaattcactgtttagctctgtaccacattattaatttgcttatttgggtt
tgttggtatttaactttagttctttataacttttgaatattggccctttg
tccaagatagagttggtgagcatcattttccaatctgtaggctgttattc
tttgctattgattgtgtcctttgccttagttttttttttttttttttttt
tttttttttttttttttttagtttcaaagggggttatttctcaattgttg
attttagtgcctgagccattcatgttctattcgggaagttgtcttcttta
ccaatgagttcaaggatagttcccactctctgttttattcgatttagggt
atctggtttttctgttgatggctttgatccatttaaacttgagttttgag
caggatgataaatatggatatatttgcagtcttatacatgcagacataca
gttagaccagcatcatttgttgaagatgctttttttttttttcattgcat
ggtttaggcttctttgtcaaaaatcaagtgtctgtaggtatatgggtgtg
atggtttgtatattcttgggccagggagtggccccatttggaggagtgga
cttgttggaataaatgtgacctggttggagtaggtgtgtcactgtgggtg
tgggcttaaaatcctcaccctaaatgacaaaagtcactcttccac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_71724031_71725150
seq2: B6Ng01-250I06.b_42_1152 (reverse)

seq1  TAGCACGTGGTAATTTGAATGAGAAAGTGGCCCCCATATGCTCATATATA  50
      ||||||||||||  ||| |||||||||| |||||||||||||||||||||
seq2  TAGCACGTGGTA--TTG-ATGAGAAAGT-GCCCCCATATGCTCATATATA  46

seq1  TAAATTTTTATTCATTCTACAGTTGGCTGAACTCATTGGAAATGATTGGT  100
      | || ||||||||| ||||||||  |||| ||||||||||||||||||||
seq2  TTAAATTTTATTCA-TCTACAGT--GCTG-ACTCATTGGAAATGATTGGT  92

seq1  AGGTGTGGTCTTGTTTGGGTAGGTATGTGACTTGAGGTGGGCCTTGAAAT  150
      | |||||||| ||||| |||||||||||||||||||||||||||||||||
seq2  A-GTGTGGTCCTGTTT-GGTAGGTATGTGACTTGAGGTGGGCCTTGAAAT  140

seq1  GTACAAGCCCAATGCAGCTCCTAGTTAGCCTTTCTCTACTTTTTGGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAGCCCAATGCAGCTCCTAGTTAGCCTTTCTCTACTTTTTGGTTGT  190

seq1  TGACTCAACATGAAAAATCTCAGCCACAGCTACACACTCATGTATTAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCAACATGAAAAATCTCAGCCACAGCTACACACTCATGTATTAAAG  240

seq1  GAGTCTGCTACCCTCTGAAACACCACTCCTCAAATTAAATACTTTCTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTGCTACCCTCTGAAACACCACTCCTCAAATTAAATACTTTCTTAT  290

seq1  ATACGTAACC-TTGGTCACCTTGTCATTTTATAGTAATAGAGAATTTATG  349
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATACGTAACCTTTGGTCACCTTGTCATTTTATAGTAATAGAGAATTTATG  340

seq1  AATACATTCACTAATATTTTTTCCTGGTGCTTATAACATATTTTATATCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATTCACTAATATTTTTTCCTGGTGCTTATAACATATTTTATATCC  390

seq1  ATTCATTTTACAGTGTTTTTTACAGATCATGCTGCTTCCTAATTTGTATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTTACAGTGTTTTTTACAGATCATGCTGCTTCCTAATTTGTATT  440

seq1  ATAATAAAGCACCTCTGGAACACGATGAAGGTGCTATTTGGAAGCTGCAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAAGCACCTCTGGAACACGATGAAGGTGCTATTTGGAAGCTGCAC  490

seq1  TGATTGTTGTCATTAGATATCAGTGTACATCTATGGTTTATATATCCTAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGTTGTCATTAGATATCAGTGTACATCTATGGTTTATATATCCTAC  540

seq1  AGGATGTCATCTTCTTGATTATAAATATGCAAGCATTTCAAAACCCATTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTCATCTTCTTGATTATAAATATGCAAGCATTTCAAAACCCATTT  590

seq1  ATACTAAACTTTGCCTAGCATCAGTCTTCTTCACATACTTCAATACCAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAAACTTTGCCTAGCATCAGTCTTCTTCACATACTTCAATACCAAG  640

seq1  GCATGTGCAGCTAATCTTATGTTAGAAAAATAAATGCTCAATTGTTTTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGCAGCTAATCTTATGTTAGAAAAATAAATGCTCAATTGTTTTTT  690

seq1  AATTGAGGGGATGGTTATTCATGTGATAATAAGCCTTATCAATGTATTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAGGGGATGGTTATTCATGTGATAATAAGCCTTATCAATGTATTAA  740

seq1  ATATCATAAGATAATATAAATGTGTAACACTCTTTCTAATTTAATTTATC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATAAGATAATATAAATGTGTAACACTCTTTCTAATTTAATTTATC  790

seq1  ACAAGACATTTTTCATTATACAATACTCTAGAAACTCAAAATGTATTTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGACATTTTTCATTATACAATACTCTAGAAACTCAAAATGTATTTTA  840

seq1  TATTGTAAACATGAGATGTTCTATCAATCTTAATATACATTTTGATTATA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTAAACATGAGATGTTCTATCAATCTTAATATACATTTTGATTATA  890

seq1  ATTTTAAATTTAAGATATCATTTCATAAATATATCTTTAAATTTCCTAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAATTTAAGATATCATTTCATAAATATATCTTTAAATTTCCTAGA  940

seq1  TTTGAGAATACAATGCACTTTTTTTTCAAAGATGGGTTATTCACAGCACC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAATACAATGCACTTTTTTTTCAAAGATGGGTTATTCACAGCACC  990

seq1  AATAGTAATATTCTTCTTGGGTTCAAATATAGAATTTTCTTAATCCATGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTAATATTCTTCTTGGGTTCAAATATAGAATTTTCTTAATCCATGA  1040

seq1  TTTGAACTAGGCGTCCTTCTGATGGACATATCTGAATCTGCAATGGAGAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAACTAGGCGTCCTTCTGATGGACATATCTGAATCTGCAATGGAGAA  1090

seq1  TCAGTGCCACTTAGTGAATTC  1120
      |||||||||||||||||||||
seq2  TCAGTGCCACTTAGTGAATTC  1111


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