BAC Information

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BAC

Clone NameB6Ng01-250L08
Chromosome16 (Build37)
Map Location 37,042,486 - 37,043,163
singlet/doubletsinglet
Overlap genePolq
Upstream geneWdr5b, 2310056P07Rik, Ccdc58, Csta, Stfa2l1, EG433016, EG627962, EG408196, 2010005H15Rik, Stfa1, EG209324, LOC100038854, BC100530, LOC639105, Stfa2, Stfa3, Casr, EG667232, Cd86, Ildr1, LOC667246, Slc15a2, LOC667023, Eaf2, Iqcb1, LOC628101, Golgb1, Hcls1, Fbxo40, LOC100043252
Downstream geneStxbp5l, Gtf2e1, Rabl3, Hgd, Ndufb4, LOC100043709, Fstl1, LOC100043264, Lrrc58, Gpr156, LOC100043271
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250L08.bB6Ng01-250L08.g
ACCGA058178GA058179
length709875
definitionB6Ng01-250L08.b B6Ng01-250L08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattacttttctggtcactgtgacacaataacttgacaaaagaac
tgaaggaaggaagagtttctttggtctcacagttgagggtgtagttcatt
atgatagggaaggtatggaaggaggaaaggttgaggcgccagttcccatt
gcatccatagtgtctttgttaaggttttattggtgtcttagtcagtcttc
tagtgctgtgaagagataacatgaccacagcaactcttgaacaaacaaag
aaaccccagacatataattggggctggcttacagttcagaggttcagtcc
attatcatcatgatgggaagcatggcagcatgcaggcaggcatagtgctg
gagaagctgagagttctacatcttgatctctaagcagcaggaaatgactg
gcttgagcttctgacacctcaaaacctgccccacagtgacacttcctcca
acaaggccacacccactccaacaagaccacacctcctaatagtgccactc
cctacagcccgacattcaaacatgtgagtctgtgatggtcaaacctattc
acagcagctcacacagttaggaggtagagagagagagagagagagagaga
gagagagagagagagagagagagagagatagagagatatgctggagctca
gctccctgtctcctttttattccgtgcgggactcccagcccaacgcgggt
gcttccatc
gaattctgctgtaatgccatctggcactgagatttttcttgggttggggc
tggcaggcttttaaatattatttctacttcacttctacatttccttttta
aagacctctatcatctttataagattggatttaaggccattttctttttt
tttttccattttttattaggtatttagctcatttacatttccaatgctat
accaaaagtcccccatacccaccccaccccccactcccctacccatccac
tccccctttttggccctggcattcccctgtactggggcatataaagtttg
caagtccaatgggcctctctttgcagtgatggccgactaggccatctttt
gatacatatgcagctagagacaagagctccggggtactgcttagttcata
ttgttgttccacctatagggttgcagttccctttagttccttgggtgctt
tctctagttcctccattgggggccctatggtccattcaatagctgactgt
gagcatccacttctgtgtttgctaggccctggcatagtctcacaagagac
agctgtatctgggtcctttcagcaaaatcttgctagtgtatgcaatggtg
tcagcgtttggaagctgatcatggaatggatctctggatatggcaatcac
taggtggtccaaggccattttcttgtgtttccgttgtgtttaggatatcc
aggattagctgtagtagagaagctgtgctttggatgtgttatatttccca
gcttttgattgtgttcttttcagggcctttagcaaatctggatggttttg
gtccctggctgttccctgttgtagtaattatttgggaagggggtgaacct
tgatggccctggagtggcaggcctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_37042486_37043163
seq2: B6Ng01-250L08.b_45_725

seq1  GAATTCATTACTTTTCTGGTCACTGTGACACAATAACTTGACAAAAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTACTTTTCTGGTCACTGTGACACAATAACTTGACAAAAGAAC  50

seq1  TGAAGGAAGGAAGAGTTTCTTTGGTCTCACAGTTGAGGGTGTAGTTCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGAAGGAAGAGTTTCTTTGGTCTCACAGTTGAGGGTGTAGTTCATT  100

seq1  ATGATAGGGAAGGTATGGAAGGAGGAAAGGTTGAGGCGCCAGTTCCCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAGGGAAGGTATGGAAGGAGGAAAGGTTGAGGCGCCAGTTCCCATT  150

seq1  GCATCCATAGTGTCTTTGTTAAGGTTTTATTGGTGTCTTAGTCAGTCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCATAGTGTCTTTGTTAAGGTTTTATTGGTGTCTTAGTCAGTCTTC  200

seq1  TAGTGCTGTGAAGAGATAACATGACCACAGCAACTCTTGAACAAACAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCTGTGAAGAGATAACATGACCACAGCAACTCTTGAACAAACAAAG  250

seq1  AAACCCCAGACATATAATTGGGGCTGGCTTACAGTTCAGAGGTTCAGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCCAGACATATAATTGGGGCTGGCTTACAGTTCAGAGGTTCAGTCC  300

seq1  ATTATCATCATGATGGGAAGCATGGCAGCATGCAGGCAGGCATAGTGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCATCATGATGGGAAGCATGGCAGCATGCAGGCAGGCATAGTGCTG  350

seq1  GAGAAGCTGAGAGTTCTACATCTTGATCTCTAAGCAGCAGGAAATGACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCTGAGAGTTCTACATCTTGATCTCTAAGCAGCAGGAAATGACTG  400

seq1  GCTTGAGCTTCTGACACCTCAAAACCTGCCCCACAGTGACACTTCCTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGAGCTTCTGACACCTCAAAACCTGCCCCACAGTGACACTTCCTCCA  450

seq1  ACAAGGCCACACCCACTCCAACAAGACCACACCTCCTAATAGTGCCACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCCACACCCACTCCAACAAGACCACACCTCCTAATAGTGCCACTC  500

seq1  CCTACAGCCCGACATTCAAACATGTGAGTCTGTGATGGTCAAACCTATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAGCCCGACATTCAAACATGTGAGTCTGTGATGGTCAAACCTATTC  550

seq1  ACAGCAGCTCACACAGTTAGGAGGT--AGAGAGAGAGAGAGAGAGAGAGA  598
      |||||||||||||||||||||||||  |||||||||||||||||||||||
seq2  ACAGCAGCTCACACAGTTAGGAGGTAGAGAGAGAGAGAGAGAGAGAGAGA  600

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGATAGAGAGATATGCTGGAGCTCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGATAGAGAGATATGCTGGAGCTCA  650

seq1  GCTCCCTGTCTCC-TTTTATTCCGTGCGGGA  678
      ||||||||||||| |||||||||||||||||
seq2  GCTCCCTGTCTCCTTTTTATTCCGTGCGGGA  681