BAC Information

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BAC

Clone NameB6Ng01-250P07
Chromosome16 (Build37)
Map Location 66,000,630 - 66,001,772
singlet/doubletsinglet
Overlap genenone
Upstream geneHtr1f, LOC668247, LOC672931, Pou1f1, Chmp2b, EG383186, Vgll3, LOC664846
Downstream geneLOC100039035, Cadm2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250P07.bB6Ng01-250P07.g
ACCGA058353GA058354
length1,1301,135
definitionB6Ng01-250P07.b B6Ng01-250P07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaaacactttcttctcgatttcatattactagagcagaggcaa
gggatattgttatggcttgcaaagcctgtgtccccctattgcctcaggca
agtgtgggagtaaacccttatggcctgcttctcctccacatttggcaaat
ggatgtgacttatttttcagaatttggtaaactgcaatttgttcatgttc
ctgtagatacagtctctggggtgttgtttgcctccctgcatactggtgaa
aaggcatgccatgccattgcccattgctttgaggcatggggtacattggg
tcagcccagagagcttaagactgataatggacctgcctatacctcagctt
cttttgtttccttttgtaaaatgatgggtgtccgcttggtgcacggtata
ccctacaatcctcatggccagggcatcattgaaagagcccatcgcactct
gaaagagtgtctaataaaacagaaagggggagtagcctctggcgctactc
ctagggagagattagccattgctctctttacgttggattttttgaataaa
gataaaaatgatttgactgctgcagaatggtttgccaatcccgaggcatc
ctacaaaggcacagtcatgtggaaggatgttctgaatggatgatggcaaa
ggcccaatcctgtgttggtctgggtgagagggtctgtttgtgtgttttcc
acaggatcatctccagcagctgtgggttccggagcgcttgacgagggtag
ttcaagatggatggaggtgccctgatgaagctgcccctgggggtgatgat
gctgcccacagtgatgactgaagatctacgatggggccccttttctaggg
gtatttgagattcgctgcccccatggaccggctgccagaccaggaaagat
acgtgggccatgaaaaaatattttacctttccccttatgttagtaccagt
catatccaaatgttttccagggtttaattggacattatcaaaatccagcc
cagagagggggcaagcaatcccttttatgttggctgctgtgtgggacaaa
tgggagttgaacagatcttctcctttggagtatatgatgggtggggggca
tggggaaattgcttagcctttattgaaatg
gaattcatgtttcttagcttctataatttaaaaataaataaataaaataa
aaccaatcccgttgtctactgtggggatttttatgctgagaaagtgaact
acaatttacaactgaagaaactcgaacttccatgaattcaaggcaaacat
ttcttgtttgaggagcttatttttaagcacttaaatacttcaaaatataa
cctagttgatgattttcataaactcatcttccgaggttttctcttgaccc
aggttttgtctatcaaagtaatattaattggatttcatcttttcctttca
tgacaacacaaggtgatcagtccacctgtctgaatatctatctacctttc
aggagactgtgcatcaaagagtgtacaataactcaagggaatgagctaag
taacagatgaagctgtctgcaggaccggggtcctttcatggttgcagtat
ttcatacaatttcgttggcaaattgcctaccagatgggctacagcccagg
agggaggtttactgctctactccccagaatggtgtcccctcgcattttct
cccctttaggtttgaatgtcagttgcttgcagaggggaaaagaaagggct
cgcacttgggattcttgagtgactgccagaaaagaattgtctctgagaat
tgccattttccaggttcccatagtatgcagtaaacccaattatccaagct
aagggttagaaaccggaaacaggggtgggggcatcttataactatcaaca
tggatatcttctgagaggcagcaataaaaggatctattacacttcagttg
ttaaacttaagatacactattgatattcataaaataattgcagatcgctg
cagtcactcagagtctaggccacaagatactgacaattttcctgtattgg
tcacaggtatttgcttaaagtctttttactactgagattaggtcaagggt
ttagaaagtgtgggacactagacaaacatccactgccaattactttcgac
gtccatagctgcttatggttttcaagtcctgaaaccatgaaaaagtgcat
gttacacttatatgaatttaattcactgtccataaataatccgcactgga
aactcatcaagtgagcgagtcctttcagttgtgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_66000630_66001772
seq2: B6Ng01-250P07.g_68_1202

seq1  GAATTCATGTTTCTTAGCTTCTATAATTTAAAAATAAATAAATAAAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTTTCTTAGCTTCTATAATTTAAAAATAAATAAATAAAATAA  50

seq1  AACCAATCCCGTTGTCTACTGTGGGGATTTTTATGCTGAGAAAGTGAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAATCCCGTTGTCTACTGTGGGGATTTTTATGCTGAGAAAGTGAACT  100

seq1  ACAATTTACAACTGAAGAAACTCGAACTTCCATGAATTCAAGGCAAACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTACAACTGAAGAAACTCGAACTTCCATGAATTCAAGGCAAACAT  150

seq1  TTCTTGTTTGAGGAGCTTATTTTTAAGCACTTAAATACTTCAAAATATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTTTGAGGAGCTTATTTTTAAGCACTTAAATACTTCAAAATATAA  200

seq1  CCTAGTTGATGATTTTCATAAACTCATCTTCCGAGGTTTTCTCTTGACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTTGATGATTTTCATAAACTCATCTTCCGAGGTTTTCTCTTGACCC  250

seq1  AGGTTTTGTCTATCAAAGTAATATTAATTGGATTTCATCTTTTCCTTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTGTCTATCAAAGTAATATTAATTGGATTTCATCTTTTCCTTTCA  300

seq1  TGACAACACAAGGTGATCAGTCCACCTGTCTGAATATCTATCTACCTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAACACAAGGTGATCAGTCCACCTGTCTGAATATCTATCTACCTTTC  350

seq1  AGGAGACTGTGCATCAAAGAGTGTACAATAACTCAAGGGAATGAGCTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGACTGTGCATCAAAGAGTGTACAATAACTCAAGGGAATGAGCTAAG  400

seq1  TAACAGATGAAGCTGTCTGCAGGACCGGGGTCCTTTCATGGTTGCAGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGATGAAGCTGTCTGCAGGACCGGGGTCCTTTCATGGTTGCAGTAT  450

seq1  TTCATACAATTTCGTTGGCAAATTGCCTACCAGATGGGCTACAGCCCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATACAATTTCGTTGGCAAATTGCCTACCAGATGGGCTACAGCCCAGG  500

seq1  AGGGAGGTTTACTGCTCTACTCCCCAGAATGGTGTCCCCTCGCATTTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGTTTACTGCTCTACTCCCCAGAATGGTGTCCCCTCGCATTTTCT  550

seq1  CCCCTTTAGGTTTGAATGTCAGTTGCTTGCAGAGGGGAAAAGAAAGGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTAGGTTTGAATGTCAGTTGCTTGCAGAGGGGAAAAGAAAGGGCT  600

seq1  CGCACTTGGGATTCTTGAGTGACTGCCAGAAAAGAATTGTCTCTGAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACTTGGGATTCTTGAGTGACTGCCAGAAAAGAATTGTCTCTGAGAAT  650

seq1  TGCCATTTTCCAGGTTCCCATAGTATGCAGTAAACCCAATTATCCAAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTTTCCAGGTTCCCATAGTATGCAGTAAACCCAATTATCCAAGCT  700

seq1  AAGGGTTAGAAACCGGAAACAGGGGTGGGGGCATCTTATAACTATCAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTTAGAAACCGGAAACAGGGGTGGGGGCATCTTATAACTATCAACA  750

seq1  TGGATATCTTCTGAGAGGCAGCAATAAAAGGATCTATTACACTTCAGTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATCTTCTGAGAGGCAGCAATAAAAGGATCTATTACACTTCAGTTG  800

seq1  TTAAACTTAAGATACACTATTGATATTCATAAAATAATTGCAGATCGCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTTAAGATACACTATTGATATTCATAAAATAATTGCAGATCGCTG  850

seq1  CAGTCACTCAGAGTCTAGGCCACAAGATACTGACAATTTTCCTGTATTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACTCAGAGTCTAGGCCACAAGATACTGACAATTTTCCTGTATTGG  900

seq1  TCACAGGTATTTGCTTAAGGTCTTTTTACTACTGAGATTAGGTCAAGGGT  950
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCACAGGTATTTGCTTAAAGTCTTTTTACTACTGAGATTAGGTCAAGGGT  950

seq1  TTAGAAAGTGTGGGACACTAGACAAACATCCACTGCCAATTACTTTCGAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAGTGTGGGACACTAGACAAACATCCACTGCCAATTACTTTCGAC  1000

seq1  GTCCATAGCTGCTTAATGGTTTTCAAGTCCCTGGAAACAATGAAAAAAAG  1050
      |||||||||||||| |||||||||||||||   ||||| |||  ||||||
seq2  GTCCATAGCTGCTT-ATGGTTTTCAAGTCC--TGAAACCATG--AAAAAG  1045

seq1  TGGCATGTACAATTTATATGAAATTTAAATTTCACTGTTCATAAATAAAT  1100
      | ||||||   | ||||||| |||||||  |||||||| ||||||| |||
seq2  T-GCATGTTACACTTATATG-AATTTAA--TTCACTGTCCATAAAT-AAT  1090

seq1  CCGCACTGG-AACTCATCCAGTGAGC-AGTCCTTTCAAATGTGAC  1143
      ||||||||| |||||||| ||||||| ||||||||||  ||||||
seq2  CCGCACTGGAAACTCATCAAGTGAGCGAGTCCTTTCAGTTGTGAC  1135