BAC Information

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BAC

Clone NameB6Ng01-252K19
Chromosome16 (Build37)
Map Location 72,447,615 - 72,448,786
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneRobo1, LOC100039310, LOC100039318, LOC100039326
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252K19.bB6Ng01-252K19.g
ACCGA059606GA059607
length1,170765
definitionB6Ng01-252K19.b B6Ng01-252K19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgagttgggttcaatattctgccatgggttggcttacctatc
cctcaaattttgatcagggaagttatttagtatcttcaagtattgttttt
cctaattgtagtttgaactttgaattccgtaaaatctcttgcatttccac
ataatgaactgtatgaaattaaagaatacaagaaagatgatgtcaaggag
aatttcaccctggcaactctccattggaaggaatgcccctgcaaacagaa
ttcagtctaaagcaacacatttaaatgtacatgttaaggatagtcttttg
tctaatgcaaaatcctctctctgtaaagtcactatgctttgattatatga
aaaaaaatgtcaagtgagctttgtacaaaagaaatacatcttccttactg
gatacccacagattttataaatctggacaaaagaagacagaacacaagca
agtttagagtaaaggatagaaaaattttggtacttatactaaattttcac
acatgaaatcaaccaatataaatcatgggcataaaaatgtttactgtagg
ggctggagagatggctcagtagttaagagcactgactgattgctcttcca
gaggtcctgagttcaattcccagcaaccacatggtggctgaaaaccatct
gtaatgggatctaatgctctcttccagtgtctctgaaaacagtggcagtg
tactcacatacattaagtaaataaataaatattaaaaaaatttttactct
acccagtagttgaggaaagaattatctatgtgtatacacacacacacaca
cacacacacacacacataaaaagttcatgtgttattttatatttcttgtt
tctgctatttgtcagttttcctagtttctttttaactctacctcctttaa
caaataatagcattcttcaataaggtgctaggagcacccccagtctggtt
acaccaataatacaatggcagaaaagaataccaagagttttgcccatcag
atattttaacccgaactactatgcatgatgaaaatgttgactttgattaa
tatgtaaaattttcaactagtcaataacatatatgtttgtaaagtcactg
gattctatttaacatagctccaaaagaacaataaactccgttaatcttag
taagaaatttggtttggaat

attctttctttctttcttttttaatatttttattattatgtattttcctc
aattacatttagaatgctatcccaaaagtcccccataccctcccccccca
cttccctacccacccattcccattttttggccctggcattcccctgtact
ggggcatataaagtttgcgtgtccaatgggcctctctttccagtgatggc
cgactaggccatcttttgatacatatgcagctagagtcaagagatccagg
gtactggttagttcataatgttgttccacatatagggttgccgttccctt
tacctccttgggtgctttctctacctcctccattgggagccctgtgatcc
atccattagctgactgtgagcatccacttctgtgtttgctaggccccggc
atcatctcacaagagacagctatatctgggacctttcagcaaaatcttgc
tagtgtatgcagtggtgtcagcgtttggaagctgattatggggtggatcc
ctggatatggcagtctctagatggtccattctttcatcacagctccaaac
tttgtctctgtaactccttccattggtgttttgttccctatttctaagaa
ggggcacagagttcccactttggtcttcattcttctgagtttcatgcgtt
tagcataattgtatcttatatcttgggtatcctaggttttgggctaatat
ccacttatcagtgagtacatattggtgtaagctcctttgtggatagtgtt
acctcactcaagata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_72447615_72448786
seq2: B6Ng01-252K19.b_47_1216 (reverse)

seq1  ATTCAAAACCAAATTTTCTTACTAAAGAATAACAGAGTATA-TGTTCTTT  49
      |||| |||||||| ||||||||| |||| |||| |||| || ||||||||
seq2  ATTCCAAACCAAA-TTTCTTACT-AAGATTAACGGAGTTTATTGTTCTTT  48

seq1  TGGAAGCTATGTTAAATAG-ATCCAGTGACTTTACAAACATATATGTTA-  97
      ||| ||||||||||||||| ||||||||||||||||||||||||||||| 
seq2  TGG-AGCTATGTTAAATAGAATCCAGTGACTTTACAAACATATATGTTAT  97

seq1  TGACTAGTTGAAAATTTTACATATTAAACCAAAAGTCAAACATTTTCATC  147
      ||||||||||||||||||||||||||| |  |||||| ||||||||||||
seq2  TGACTAGTTGAAAATTTTACATATTAATC--AAAGTC-AACATTTTCATC  144

seq1  ATGCATAGTAGTTCGTG-TAAAATATCTGATGGGCAAAACTCTTGGTATT  196
      ||||||||||||||| | ||||||||||||||||||||||||||||||||
seq2  ATGCATAGTAGTTCGGGTTAAAATATCTGATGGGCAAAACTCTTGGTATT  194

seq1  CTTTTCTGCCA-TGTATTATTGGTTGTAACCAGACTGGGGGTGCTCCTAG  245
      ||||||||||| ||||||||||| ||||||||||||||||||||||||||
seq2  CTTTTCTGCCATTGTATTATTGG-TGTAACCAGACTGGGGGTGCTCCTAG  243

seq1  CACCCTTATTG-AGAATGCTATTATTTGTTAAAGGA-GTAGAGTTAAAAA  293
      || |||||||| |||||||||||||||||||||||| |||||||||||||
seq2  CA-CCTTATTGAAGAATGCTATTATTTGTTAAAGGAGGTAGAGTTAAAAA  292

seq1  GAAACTAGGAAAACTGACAAAATAGCAGAAACAAGAAATATAAAATAACA  343
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GAAACTAGGAAAACTGAC-AAATAGCAGAAACAAGAAATATAAAATAACA  341

seq1  CATGAACTTTTTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACAC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAACTTTTTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACAC  391

seq1  ATAGATAATTCTTTCCTCAACTACTGGGTAGAGTAAAAATTTTTTTAATA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAATTCTTTCCTCAACTACTGGGTAGAGTAAAAATTTTTTTAATA  441

seq1  TTTATTTATTTACTTAATGTATGTGAGTACACTGCCACTGTTTTCAGAGA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATTTACTTAATGTATGTGAGTACACTGCCACTGTTTTCAGAGA  491

seq1  CACTGGAAGAGAGCATTAGATCCCATTACAGATGGTTTTCAGCCACCATG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGAAGAGAGCATTAGATCCCATTACAGATGGTTTTCAGCCACCATG  541

seq1  TGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAATCAGTCAGTG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAATCAGTCAGTG  591

seq1  CTCTTAACTACTGAGCCATCTCTCCAGCCCCTACAGTAAACATTTTTATG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAACTACTGAGCCATCTCTCCAGCCCCTACAGTAAACATTTTTATG  641

seq1  CCCATGATTTATATTGGTTGATTTCATGTGTGAAAATTTAGTATAAGTAC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGATTTATATTGGTTGATTTCATGTGTGAAAATTTAGTATAAGTAC  691

seq1  CAAAATTTTTCTATCCTTTACTCTAAACTTGCTTGTGTTCTGTCTTCTTT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTTTTCTATCCTTTACTCTAAACTTGCTTGTGTTCTGTCTTCTTT  741

seq1  TGTCCAGATTTATAAAATCTGTGGGTATCCAGTAAGGAAGATGTATTTCT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGATTTATAAAATCTGTGGGTATCCAGTAAGGAAGATGTATTTCT  791

seq1  TTTGTACAAAGCTCACTTGACATTTTTTTTCATATAATCAAAGCATAGTG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACAAAGCTCACTTGACATTTTTTTTCATATAATCAAAGCATAGTG  841

seq1  ACTTTACAGAGAGAGGATTTTGCATTAGACAAAAGACTATCCTTAACATG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTACAGAGAGAGGATTTTGCATTAGACAAAAGACTATCCTTAACATG  891

seq1  TACATTTAAATGTGTTGCTTTAGACTGAATTCTGTTTGCAGGGGCATTCC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTAAATGTGTTGCTTTAGACTGAATTCTGTTTGCAGGGGCATTCC  941

seq1  TTCCAATGGAGAGTTGCCAGGGTGAAATTCTCCTTGACATCATCTTTCTT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATGGAGAGTTGCCAGGGTGAAATTCTCCTTGACATCATCTTTCTT  991

seq1  GTATTCTTTAATTTCATACAGTTCATTATGTGGAAATGCAAGAGATTTTA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTTTAATTTCATACAGTTCATTATGTGGAAATGCAAGAGATTTTA  1041

seq1  CGGAATTCAAAGTTCAAACTACAATTAGGAAAAACAATACTTGAAGATAC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAATTCAAAGTTCAAACTACAATTAGGAAAAACAATACTTGAAGATAC  1091

seq1  TAAATAACTTCCCTGATCAAAATTTGAGGGATAGGTAAGCCAACCCATGG  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAACTTCCCTGATCAAAATTTGAGGGATAGGTAAGCCAACCCATGG  1141

seq1  CAGAATATTGAACCCAACTCAATGAATTC  1172
      |||||||||||||||||||||||||||||
seq2  CAGAATATTGAACCCAACTCAATGAATTC  1170


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