BAC Information

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BAC

Clone NameB6Ng01-253B12
Chromosome16 (Build37)
Map Location 35,663,796 - 35,793,870
singlet/doubletdoublet
Overlap geneDirc2, Hspbap1
Upstream geneRopn1, Ccdc14, Mylk, Ptplb, Adcy5, Sec22a, Pdia5, Sema5b, EG546663
Downstream geneParp14, LOC667133, LOC100043217, Dtx3l, Parp9, Kpna1, Wdr5b, 2310056P07Rik, Ccdc58, Csta, Stfa2l1, EG433016, EG627962, EG408196, 2010005H15Rik, Stfa1, EG209324, LOC100038854, BC100530, LOC639105, Stfa2, Stfa3, Casr, EG667232, Cd86, Ildr1, LOC667246, Slc15a2, LOC667023, Eaf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253B12.bB6Ng01-253B12.g
ACCGA059920GA059921
length1,1321,137
definitionB6Ng01-253B12.b B6Ng01-253B12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,663,796 - 35,664,925)(35,792,737 - 35,793,870)
sequence
gaattcatcaaatgtcccatcaaatgttccagaagtttcaaatctcagcc
cagggctggcgcactccaatgctgttctctaagtgtcacaggggaccact
cactgctggcttaggttgacacctctgtcagacagtctgtatcttgacca
gaggcatccctctggtaagaggcagtgaggactgagaaccggagcctgga
ctgtactgagaggcccttcacaggactcttggcacaggtcttagtcttgc
cttcaggatgcactcaaggtggcccagaaggaagactcaagaccatagga
ggcagagtctggcctccatgcctgtggagactgttgctgctcaagattcg
ttggctgagaactgcttgagagtctctgctggcccctcatgtattcagga
acgcgcgcacgcgcgcatacacacacacacacacacacacacacacacac
acacacacacagacagacatacacaccatctgctacagcaacaaaaagga
tgttaagctgtggcattattaattaaagatgatatccagtctccaaatgg
aactgtctttgtgcatatgtgtgtggaccctcttggcatggtgtagtcca
tcagtgcagtgctctgaggtaacagatggtttctcaagacggaggaaaca
acccagtggagtttgactttaatagaggccatctttctctgtgggtttat
gtgcatgcacacacccgtgtgtgtgcgcgcgcgcatacacacacacacac
acctttctctttcagaaaagaagctggggtagggggtaaatggaattcac
cagtgaggccacaaggcccagcaaaggcaacatcagatgtgggcctaccc
tgagcagctcctgtgtggagttggggaatccagcaggagggcattgatga
ggaggattcatgagatatgttgggaagctgagtttaacaaaacccaattg
agaaatgatgcctgttgggcaggcgaagcctaatggagttgtgctgggat
taaataaaaaatcacctcagagcctcatcccctcaattcaatgtgtcact
gtggaccgcaattggattgacatgtaaatttagagaacaatttcttgact
tacttggataggatcaatctcataagatctca
gaattcacagagatcctctgcctcatgccagaagggtttctttaaagtga
gcactctgtataactataaaaaccttttagatgaataaaattcaaagata
ctgaggaaggaagagtaacagacgagcagagtagacgagtggttgccaga
agctggggtgagtaggcaggatggactgactgggaaagaatagttgtggg
aattatgttacagttagataggagatggtctggtgtcctaacacacaaca
gaaaaacaatgtaaccacgtatttcaaaagaaatattttgatacttcaat
tacaaagaaatggtcaatattctgattgatatgtaatgtatacatattca
gaaatatcatatactacaaaaatatatatataacttatatcagcatgtct
gtaatccctgtggaggctgaggcaggaggattatctccaatttaaggcaa
gcttgggagagctatacagtggtgcagtgagctatagagtgagacaacat
agtgggaggcaaacaacaacagcagcaacaaaaacaatagcaacagcaac
aatacagcagcagcagcaataacagcaacaacagccccaagcacacagga
agtgagtagctgggctgtctgagctatagtttcaaacactcaaatgtgta
tcagtgctaagatggtgctttcaaaatcatttcactagccccaaagtcac
aacttaagatgtacatacccgcaaaactgatgggagaagacacaaggaca
cacagggacacactaaaggacgctgccaaagccagtgcagtttaagatgg
ccatcgtgtaactgaggctggagctatacttgccaactgtgttgaaaaac
tacagcaatgccatcaaagtatcagcgtagtctattttaagaggagaaat
ttctaaaatgaaacaagtgagaataaatgttgtagagcactagctgattt
gattataaaaagcatggctagccaaacagatgcaaaaaaataaattgggg
aaacattcatcgtataagaattgtcttgaaagtaaataaacacacagggc
agtggtgggtggtaacacgtctttagttcttagcacctcacgtgcagagg
tagaacagatctccttgtgagtttcaaggacagcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_35663796_35664925
seq2: B6Ng01-253B12.b_43_1174

seq1  GAATTCATCAAATGTCCCATCAAATGTTCCAGAAGTTTCAAATCTCAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAAATGTCCCATCAAATGTTCCAGAAGTTTCAAATCTCAGCC  50

seq1  CAGGGCTGGCGCACTCCAATGCTGTTCTCTAAGTGTCACAGGGGACCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTGGCGCACTCCAATGCTGTTCTCTAAGTGTCACAGGGGACCACT  100

seq1  CACTGCTGGCTTAGGTTGACACCTCTGTCAGACAGTCTGTATCTTGACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTGGCTTAGGTTGACACCTCTGTCAGACAGTCTGTATCTTGACCA  150

seq1  GAGGCATCCCTCTGGTAAGAGGCAGTGAGGACTGAGAACCGGAGCCTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCATCCCTCTGGTAAGAGGCAGTGAGGACTGAGAACCGGAGCCTGGA  200

seq1  CTGTACTGAGAGGCCCTTCACAGGACTCTTGGCACAGGTCTTAGTCTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTGAGAGGCCCTTCACAGGACTCTTGGCACAGGTCTTAGTCTTGC  250

seq1  CTTCAGGATGCACTCAAGGTGGCCCAGAAGGAAGACTCAAGACCATAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGGATGCACTCAAGGTGGCCCAGAAGGAAGACTCAAGACCATAGGA  300

seq1  GGCAGAGTCTGGCCTCCATGCCTGTGGAGACTGTTGCTGCTCAAGATTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGTCTGGCCTCCATGCCTGTGGAGACTGTTGCTGCTCAAGATTCG  350

seq1  TTGGCTGAGAACTGCTTGAGAGTCTCTGCTGGCCCCTCATGTATTCAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTGAGAACTGCTTGAGAGTCTCTGCTGGCCCCTCATGTATTCAGGA  400

seq1  ACGCGCGCACGCGCGCATACACACACACACACACACACACACACACACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCGCGCACGCGCGCATACACACACACACACACACACACACACACACAC  450

seq1  ACACACACACAGACAGACATACACACCATCTGCTACAGCAACAAAAAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACAGACAGACATACACACCATCTGCTACAGCAACAAAAAGGA  500

seq1  TGTTAAGCTGTGGCATTATTAATTAAAGATGATATCCAGTCTCCAAATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAGCTGTGGCATTATTAATTAAAGATGATATCCAGTCTCCAAATGG  550

seq1  AACTGTCTTTGTGCATATGTGTGTGGACCCTCTTGGCATGGTGTAGTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTCTTTGTGCATATGTGTGTGGACCCTCTTGGCATGGTGTAGTCCA  600

seq1  TCAGTGCAGTGCTCTGAGGTAACAGATGGTTTCTCAAGACGGAGGAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGCAGTGCTCTGAGGTAACAGATGGTTTCTCAAGACGGAGGAAACA  650

seq1  ACCCAGTGGAGTTTGACTTTAATAGAGGCCATCTTTCTCTGTGGGTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGTGGAGTTTGACTTTAATAGAGGCCATCTTTCTCTGTGGGTTTAT  700

seq1  GTGCATGCACACACCCGTGTGTGTGCGCGCGCGCATACACACACACACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGCACACACCCGTGTGTGTGCGCGCGCGCATACACACACACACAC  750

seq1  ACCTTTCTCTTTCAGAAAAGAAGCTGGGGTAGGGGGTAAATGGAATTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTCTCTTTCAGAAAAGAAGCTGGGGTAGGGGGTAAATGGAATTCAC  800

seq1  CAGTGAGGCCACAAGGCCCAGCAAAGGCAACATCAGATGTGGGCCTACCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGGCCACAAGGCCCAGCAAAGGCAACATCAGATGTGGGCCTACCC  850

seq1  TGAGCAGCTCCTGTGTGGAGTTGGGGAATCCAGCAGGAGGGCATTGATGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAGCTCCTGTGTGGAGTTGGGGAATCCAGCAGGAGGGCATTGATGA  900

seq1  GGAGGATTCATGAGATATGTT-GGAAGCTGAGTTTAACAAAACCCAATTG  949
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGAGGATTCATGAGATATGTTGGGAAGCTGAGTTTAACAAAACCCAATTG  950

seq1  AGAAATGATGCCTG-TGGGCAGGCGAAGCCTAATGGAGTTTGTGCT-GGA  997
      |||||||||||||| ||||||||||||||||||||||| ||||||| |||
seq2  AGAAATGATGCCTGTTGGGCAGGCGAAGCCTAATGGAG-TTGTGCTGGGA  999

seq1  TTAAAT-AAAAATCACCTCAGAGCCTCATCCCTCCAAATCAATGTGGTCA  1046
      |||||| |||||||||||||||||||||||||  ||| ||||||| ||||
seq2  TTAAATAAAAAATCACCTCAGAGCCTCATCCCCTCAATTCAATGT-GTCA  1048

seq1  CTGTGGA-CGCAATT-GATGGACATGTTAAATTTAGAGAACAATTTCCTG  1094
      ||||||| ||||||| ||| |||||| |||||||||||||||||||| ||
seq2  CTGTGGACCGCAATTGGATTGACATG-TAAATTTAGAGAACAATTTCTTG  1097

seq1  ACTTAATTGGATA-GATCAATTCTCATAAGATTCTCA  1130
      ||||| ||||||| |||||| |||||||||| |||||
seq2  ACTTACTTGGATAGGATCAA-TCTCATAAGA-TCTCA  1132

seq1: chr16_35792737_35793870
seq2: B6Ng01-253B12.g_64_1200 (reverse)

seq1  CAGGCTGTCCTTG-AACTCACA--GAGATCTG-TCTACCTCTGCACCCTG  46
      ||||||||||||| ||||||||  |||||||| |||||||||||| | ||
seq2  CAGGCTGTCCTTGAAACTCACAAGGAGATCTGTTCTACCTCTGCA-CGTG  49

seq1  A-GTGCT-AGGACTAAAGACGTG-TACCA-CCACCACTGCCCTGTGTGTT  92
      | ||||| || |||||||||||| ||||| |||||||||||||||||| |
seq2  AGGTGCTAAGAACTAAAGACGTGTTACCACCCACCACTGCCCTGTGTG-T  98

seq1  TTATTTACTTTTCAAGACAATTCTTTATACGATGAATGTTTCCCC-ATTT  141
      |||||||| |||||||||||||| ||||||||||||||||||||| ||||
seq2  TTATTTAC-TTTCAAGACAATTC-TTATACGATGAATGTTTCCCCAATTT  146

seq1  A-TTTTTTGCATCTGTTTGGCTAGCCATGCTTTTTTATAATCAAATCAGC  190
      | |||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATTTTTTTGCATCTGTTTGGCTAGCCATGC-TTTTTATAATCAAATCAGC  195

seq1  TAGTGCTCTACAAACATTTATTCTCACTTGTTTCATTTTAGAAATTTCTC  240
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCTCTAC-AACATTTATTCTCACTTGTTTCATTTTAGAAATTTCTC  244

seq1  CTCTTAAAATAGACTACGCTGATACTTTGATGGCATTTGCTGTAGTTTTT  290
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CTCTTAAAATAGACTACGCTGATACTTTGATGGCA-TTGCTGTAGTTTTT  293

seq1  CAACACAGTTGGCAAGTATAGCTCCAGCCTCAGTTACACGATGGCCATCT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACAGTTGGCAAGTATAGCTCCAGCCTCAGTTACACGATGGCCATCT  343

seq1  TAAACTGCACTGGCTTTGGCAGCGTCCTTTAGTGTGTCCCTGTGTGTCCT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTGCACTGGCTTTGGCAGCGTCCTTTAGTGTGTCCCTGTGTGTCCT  393

seq1  TGTGTCTTCTCCCATCAGTTTTGCGGGTATGTACATCTTAAGTTGTGACT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTTCTCCCATCAGTTTTGCGGGTATGTACATCTTAAGTTGTGACT  443

seq1  TTGGGGCTAGTGAAATGATTTTGAAAGCACCATCTTAGCACTGATACACA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGCTAGTGAAATGATTTTGAAAGCACCATCTTAGCACTGATACACA  493

seq1  TTTGAGTGTTTGAAACTATAGCTCAGACAGCCCAGCTACTCACTTCCTGT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTGTTTGAAACTATAGCTCAGACAGCCCAGCTACTCACTTCCTGT  543

seq1  GTGCTTGGGGCTGTTGTTGCTGTTATTGCTGCTGCTGCTGTATTGTTGCT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTGGGGCTGTTGTTGCTGTTATTGCTGCTGCTGCTGTATTGTTGCT  593

seq1  GTTGCTATTGTTTTTGTTGCTGCTGTTGTTGTTTGCCTCCCACTATGTTG  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTATTGTTTTTGTTGCTGCTGTTGTTGTTTGCCTCCCACTATGTTG  643

seq1  TCTCACTCTATAGCTCACTGCACCACTGTATAGCTCTCCCAAGCTTGCCT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTCTATAGCTCACTGCACCACTGTATAGCTCTCCCAAGCTTGCCT  693

seq1  TAAATTGGAGATAATCCTCCTGCCTCAGCCTCCACAGGGATTACAGACAT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGGAGATAATCCTCCTGCCTCAGCCTCCACAGGGATTACAGACAT  743

seq1  GCTGATATAAGTTATATATATATTTTTGTAGTATATGATATTTCTGAATA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATATAAGTTATATATATATTTTTGTAGTATATGATATTTCTGAATA  793

seq1  TGTATACATTACATATCAATCAGAATATTGACCATTTCTTTGTAATTGAA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATACATTACATATCAATCAGAATATTGACCATTTCTTTGTAATTGAA  843

seq1  GTATCAAAATATTTCTTTTGAAATACGTGGTTACATTGTTTTTCTGTTGT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAAAATATTTCTTTTGAAATACGTGGTTACATTGTTTTTCTGTTGT  893

seq1  GTGTTAGGACACCAGACCATCTCCTATCTAACTGTAACATAATTCCCACA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAGGACACCAGACCATCTCCTATCTAACTGTAACATAATTCCCACA  943

seq1  ACTATTCTTTCCCAGTCAGTCCATCCTGCCTACTCACCCCAGCTTCTGGC  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTCTTTCCCAGTCAGTCCATCCTGCCTACTCACCCCAGCTTCTGGC  993

seq1  AACCACTCGTCTACTCTGCTCGTCTGTTACTCTTCCTTCCTCAGTATCTT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACTCGTCTACTCTGCTCGTCTGTTACTCTTCCTTCCTCAGTATCTT  1043

seq1  TGAATTTTATTCATCTAAAAGGTTTTTATAGTTATACAGAGTGCTCACTT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTTATTCATCTAAAAGGTTTTTATAGTTATACAGAGTGCTCACTT  1093

seq1  TAAAGAAACCCTTCTGGCATGAGGCAGAGGATCTCTGTGAATTC  1134
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAACCCTTCTGGCATGAGGCAGAGGATCTCTGTGAATTC  1137