BAC Information

Click to search

BAC

Clone NameB6Ng01-255D13
Chromosome16 (Build37)
Map Location 57,030,087 - 57,185,100
singlet/doubletdoublet
Overlap gene2310005G13Rik, Tomm70a, Nit2, Tbc1d23
Upstream geneRg9mtd1, Senp7, Impg2, LOC672835, Abi3bp, Tfg, Gpr128, Tmem45a, LOC668026, LOC668036
Downstream geneTmem30c, 2610528E23Rik, 4631422O05Rik, Col8a1, LOC435480, LOC629342, LOC100043477
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255D13.bB6Ng01-255D13.g
ACCGA061483GA061484
length1,0401,102
definitionB6Ng01-255D13.b B6Ng01-255D13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,030,087 - 57,031,133)(57,183,996 - 57,185,100)
sequence
gaattcccatccaaattcattgtaacctcgtgggttcctctcatttggag
gtaattgccttacagtggctagaaaagcaatgggatttgggctaacatcc
tgcaatctcattataagttggtactgagggatccctaaggccttttccag
tcccataccctccttacagctccccactcccacctggggtcaaggctagg
ccaagttccattctttacccacaggaacattcttgagtaaaacttctcag
aaacactgaataatgtactaactgatagtcatgtgaccctctggaaagtc
ccagatagagttcaaatgggtgttatgatctgcccatgcttgctagccaa
tagatttaaaggtcaatatgtttagccaataagattggactgtaacttgc
tgatgtaacctgtacccctaaaaagtataaaaactgcttataatagccat
ttggggtcaccttctagtcacttaccttgaaggactagtcagccccaaca
caccagaaaataaatctaagacagtacctgaccgagggtcaggggtctta
catttgggggctcatcccgggattcaaggtcgccccccccccccccccac
tcagcaaccaccgactaggctgactgaagggaaaagaccaagctgaacaa
caggcacctactcataagtgtttgtctctctgtcttttgctttcactttt
gactcatgagcagggtgttcctataaagcctctggtctggtgcagtcaac
tgcagtgggcagacgtgttccttaacagtgtgacggtgactgtggggagt
ctggaggatgcttcagccccctggagggaggcaggaggactctgttcctt
ttggaaagggcaagatgcagtattagcaggagccaaccaagtctcgctat
aacctggtttctatgcccatggcagggtgaattggctctgtgtgatgtct
ttctctgtgttcttggactttatttaagactgatgttatttttggacatg
gtcagaacaatgtactccaattaaacatctagtaccaccg
gaattctccatgagttgaaattctacacattatgtgttagtacttgaaag
actgttcgcgggccgggtatggcagcgcatgcctttaatcccagcacttg
ggaggcagaggcagaggcagtcggatttctgagttcgaggccagcctggt
ctaccgagtgagttccgggacagccagggttatacagagaaaccctgtct
caaaaaaaccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaaagaa
aaagaaaaagaaaaaggaagactgttcactgatcatcatgtctggggatt
ctgaagtgggctttagacaggtgggaaaggtttgctgtgacctggagctc
tcagtggggatgcagggcaacacgcgtggccattatgtccttgatccatt
ttcatttagctgtgatgcgtttgttacacttctctggtatttagtcttgg
cagagagtctcctattgcagcttttgttttgtttgtcttgtttactttca
gcccttcagcagcacctggcagacataaatgtagagggaccagaaagtgg
atacggccattggattgccagtacctcagggtcaaggggcagcatcagct
ctgtcgatgtaagtacctgcgtggagcatgccaggtcgctttccacagaa
gatgcttgactcctggaaccccagcagagcacagaagatgcttaactccc
gtaaccccagcataacagaaaagatgtcggaaatacttagtttgcaacga
ggaatcattattgcaaggttgaggacattaggtgcaggtagagaaaggga
aaagttggccagccctcatatatttgatgtttaatgattgtgatgtgcat
aactgtgaggtgctatagggagtaagttcatctcagcaaaaagtctgaca
gttgagttggatgtcattgtgtccatttagtagtatcaatcaaaatacat
ccatcaaatagtagtcattgcatccatcaaaacagtcatgtaccatgttt
atctgtacaacagagactgaaaactgctgaacagggtgacgttacctcat
ttggacttaggtagcgaccacctggaacacctccctcttttatgattcca
gt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_57030087_57031133
seq2: B6Ng01-255D13.b_44_1083

seq1  GAATTCCCATCCAAATTCATTGTAACCTCGTGGGTTCCTCTCATTTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATCCAAATTCATTGTAACCTCGTGGGTTCCTCTCATTTGGAG  50

seq1  GTAATTGCCTTACAGTGGCTAGAAAAGCAATGGGATTTGGGCTAACATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTGCCTTACAGTGGCTAGAAAAGCAATGGGATTTGGGCTAACATCC  100

seq1  TGCAATCTCATTATAAGTTGGTACTGAGGGATCCCTAAGGCCTTTTCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATCTCATTATAAGTTGGTACTGAGGGATCCCTAAGGCCTTTTCCAG  150

seq1  TCCCATACCCTCCTTACAGCTCCCCACTCCCACCTGGGGTCAAGGCTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATACCCTCCTTACAGCTCCCCACTCCCACCTGGGGTCAAGGCTAGG  200

seq1  CCAAGTTCCATTCTTTACCCACAGGAACATTCTTGAGTAAAACTTCTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTTCCATTCTTTACCCACAGGAACATTCTTGAGTAAAACTTCTCAG  250

seq1  AAACACTGAATAATGTACTAACTGATAGTCATGTGACCCTCTGGAAAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTGAATAATGTACTAACTGATAGTCATGTGACCCTCTGGAAAGTC  300

seq1  CCAGATAGAGTTCAAATGGGTGTTATGATCTGCCCATGCTTGCTAGCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATAGAGTTCAAATGGGTGTTATGATCTGCCCATGCTTGCTAGCCAA  350

seq1  TAGATTTAAAGGTCAATATGTTTAGCCAATAAGATTGGACTGTAACTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTAAAGGTCAATATGTTTAGCCAATAAGATTGGACTGTAACTTGC  400

seq1  TGATGTAACCTGTACCCCTAAAAAGTATAAAAACTGCTTATAATAGCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTAACCTGTACCCCTAAAAAGTATAAAAACTGCTTATAATAGCCAT  450

seq1  TTGGGGTCACCTTCTAGTCACTTACCTTGAAGGACTAGTCAGCCCCAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGTCACCTTCTAGTCACTTACCTTGAAGGACTAGTCAGCCCCAACA  500

seq1  CACCAGAAAATAAATCTAAGACAGTACCTGACCGAGGGTCAGGGGTCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGAAAATAAATCTAAGACAGTACCTGACCGAGGGTCAGGGGTCTTA  550

seq1  CATTTGGGGGCTCATCCCGGGATTCAAGGTCGCCCCCCCCCCCCCCCCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGGGGCTCATCCCGGGATTCAAGGTCGCCCCCCCCCCCCCCCCAC  600

seq1  TCAGCAACCACCGACTAGGCTGACTGAAGGGAAAAGACCAAGCTGAACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAACCACCGACTAGGCTGACTGAAGGGAAAAGACCAAGCTGAACAA  650

seq1  CAGGCACCTACTCATAAGTGTTTGTCTCTCTGTCTTTTGCTTTCACTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCACCTACTCATAAGTGTTTGTCTCTCTGTCTTTTGCTTTCACTTTT  700

seq1  GACTCATGAGCAGGGTGTTCCTATAAAGCCTCTGGTCTGGTGCAGTCAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCATGAGCAGGGTGTTCCTATAAAGCCTCTGGTCTGGTGCAGTCAAC  750

seq1  TGCAGTGGGCAGACGTGTTCCTTAACAGTGTGACGGTGACTGTGGGGAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTGGGCAGACGTGTTCCTTAACAGTGTGACGGTGACTGTGGGGAGT  800

seq1  CTGGAGGATGCTTCAGGCCCCCTGGAGGGAGGCAGGAGGACTCTGTTCCT  850
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CTGGAGGATGCTTCA-GCCCCCTGGAGGGAGGCAGGAGGACTCTGTTCCT  849

seq1  TTTGGAAAGGGCAAGATGCAGTATTAGCAGGAGCCAACCAAGTCTCGCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAAGGGCAAGATGCAGTATTAGCAGGAGCCAACCAAGTCTCGCTA  899

seq1  TAACCTGGTTTCTATGCCCATGGCAGGGGTGAATTGGCTCTGTGTTGATT  950
      ||||||||||||||||||||||||| |||||||||||||||||| ||| |
seq2  TAACCTGGTTTCTATGCCCATGGCA-GGGTGAATTGGCTCTGTG-TGA-T  946

seq1  GTCTTTCTCTGTGTTCTTGGACTTTATTTTAGACTGATGTTATTTTTGGA  1000
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTCTTTCTCTGTGTTCTTGGACTTTATTTAAGACTGATGTTATTTTTGGA  996

seq1  CATGGGCCAGACAAATGTAC-CCCATTAAACATCCTAGTTAACCACCG  1047
      ||| || ||||  ||||||| || ||||||||| |||||  |||||||
seq2  CAT-GGTCAGAACAATGTACTCCAATTAAACAT-CTAGT--ACCACCG  1040

seq1: chr16_57183996_57185100
seq2: B6Ng01-255D13.g_66_1167 (reverse)

seq1  ACTGGAAATCATAAAAGAGGGAAGTTGTTCA-GTGGTCGCTACCTAAGTC  49
      ||||| |||||||||||||||| ||  | || ||||||||||||||||||
seq2  ACTGG-AATCATAAAAGAGGGAGGTGTTCCAGGTGGTCGCTACCTAAGTC  49

seq1  CAAATGA-GTAACTGTCACCCTGTTCAGCAGTTTTCTGTCTCTGTTGTAC  98
      ||||||| ||||| |||||||||||||||||||||| |||||||||||||
seq2  CAAATGAGGTAAC-GTCACCCTGTTCAGCAGTTTTCAGTCTCTGTTGTAC  98

seq1  AGAATAAACATTGGTACATGACTGTTTTGATTGATGCAATGACTACTATT  148
      || ||||||| |||||||||||||||||||| |||||||||||||||| |
seq2  AG-ATAAACA-TGGTACATGACTGTTTTGATGGATGCAATGACTACTA-T  145

seq1  TTGATTGATGTATTTTGATTGATACTACTAAATTGACACAATGACATCAA  198
      ||||| ||||||||||||||||||||||||||| |||||||||||||| |
seq2  TTGATGGATGTATTTTGATTGATACTACTAAATGGACACAATGACATCCA  195

seq1  ACTCAACTGTCAAGACTTTTTGCTGAGATGAACTTACTCCCTATAGCACC  248
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACTCAACTGTC-AGACTTTTTGCTGAGATGAACTTACTCCCTATAGCACC  244

seq1  TCACAGTTATGCACATCACAATCATTAAACATCAAATATATGA-GGCTGG  297
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCACAGTTATGCACATCACAATCATTAAACATCAAATATATGAGGGCTGG  294

seq1  CCAACTTTTCCCTTTCTCTACCTGCACCTAATGTCCTCAACCTTGCAATA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTTTTCCCTTTCTCTACCTGCACCTAATGTCCTCAACCTTGCAATA  344

seq1  ATGATTCCTCGTTGCAAACTAAGTATTTCCGACATCTTTTCTGTTATGCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCCTCGTTGCAAACTAAGTATTTCCGACATCTTTTCTGTTATGCT  394

seq1  GGGGTTACGGGAGTTAAGCATCTTCTGTGCTCTGCTGGGGTTCCAGGAGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTACGGGAGTTAAGCATCTTCTGTGCTCTGCTGGGGTTCCAGGAGT  444

seq1  CAAGCATCTTCTGTGGAAAGCGACCTGGCATGCTCCACGCAGGTACTTAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATCTTCTGTGGAAAGCGACCTGGCATGCTCCACGCAGGTACTTAC  494

seq1  ATCGACAGAGCTGATGCTGCCCCTTGACCCTGAGGTACTGGCAATCCAAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGACAGAGCTGATGCTGCCCCTTGACCCTGAGGTACTGGCAATCCAAT  544

seq1  GGCCGTATCCACTTTCTGGTCCCTCTACATTTATGTCTGCCAGGTGCTGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGTATCCACTTTCTGGTCCCTCTACATTTATGTCTGCCAGGTGCTGC  594

seq1  TGAAGGGCTGAAAGTAAACAAGACAAACAAAACAAAAGCTGCAATAGGAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGGCTGAAAGTAAACAAGACAAACAAAACAAAAGCTGCAATAGGAG  644

seq1  ACTCTCTGCCAAGACTAAATACCAGAGAAGTGTAACAAACGCATCACAGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTGCCAAGACTAAATACCAGAGAAGTGTAACAAACGCATCACAGC  694

seq1  TAAATGAAAATGGATCAAGGACATAATGGCCACGCGTGTTGCCCTGCATC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAAAATGGATCAAGGACATAATGGCCACGCGTGTTGCCCTGCATC  744

seq1  CCCACTGAGAGCTCCAGGTCACAGCAAACCTTTCCCACCTGTCTAAAGCC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGAGAGCTCCAGGTCACAGCAAACCTTTCCCACCTGTCTAAAGCC  794

seq1  CACTTCAGAATCCCCAGACATGATGATCAGTGAACAGTCTTCCTTTTTCT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAGAATCCCCAGACATGATGATCAGTGAACAGTCTTCCTTTTTCT  844

seq1  TTTTCTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG  894

seq1  TTTTTTTGAGACAGGGTTTCTCTGTATAACCCTGGCTGTCCCGGAACTCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGAGACAGGGTTTCTCTGTATAACCCTGGCTGTCCCGGAACTCA  944

seq1  CTCGGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGACTGCCTCTGCCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGACTGCCTCTGCCT  994

seq1  CTGCCTCCCAAGTGCTGGGATTAAAGGCATGCGCTGCCATACCCGGCCCG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCCAAGTGCTGGGATTAAAGGCATGCGCTGCCATACCCGGCCCG  1044

seq1  CGAACAGTCTTTCAAGTACTAACACATAATGTGTAGAATTTCAACTCATG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAACAGTCTTTCAAGTACTAACACATAATGTGTAGAATTTCAACTCATG  1094

seq1  GAGAATTC  1105
      ||||||||
seq2  GAGAATTC  1102