BAC Information

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BAC

Clone NameB6Ng01-255I16
Chromosome16 (Build37)
Map Location 55,538,218 - 55,539,293
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043449, LOC667927, LOC436421, Zpld1
Downstream geneNfkbiz, Gm1752, Lrriq2, EG667966, LOC629242, Rpl24, Zbtb11, Pcnp, Rg9mtd1, Senp7, Impg2, LOC672835, Abi3bp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255I16.bB6Ng01-255I16.g
ACCGA061724GA061725
length1,2341,060
definitionB6Ng01-255I16.b B6Ng01-255I16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccattttaaaatatgtttatttggtt
cactggagtctaacttcttgagttctttgtatatattggatattagccct
ctatcgaatgtaggattggtaaagcatttttcccaatttgttgcttgcca
ttttgttctattgacagtgtcctttgccttacagaagttttgcaatttta
tgaggtcccatttgtcaatttttgatcttagatcctgagcaattggtgtt
ttgtttaggaacatttcccctgtgcccatgtgttcaaggctttttcccac
tttctcttctactagattcagaatatctggttttatgtagaggcccttga
tccacttgggcttgatctttatacaaggagataagaatggatcaatttac
attcttctacatgttgatcaccagttgaaccagcaccatatgttgaatat
gctatcttttttttttcctgctcatttctggctcttcaattctattccat
tgatctacctgcctgtctctgtaccaataccatgttttttgtttgcttgt
ttgttttttaatcactattgctttgtagtacagcttgaggtaagtgatgg
tgattcccccagaagttcttttattgttgagagtacttttcgctatcctg
gggttttttgttattctagatgaatttgagaattgctctttctatctgtg
aagaattgagttgaaattttgattggcattgcattgaatctgtagactgc
ttttggtaaaatgttcattttactatgttaatcctgctgatccatgaaca
tgaaagacctttccatctcctgaggtcttttttgatttttttttcttgag
agacttgaagttcttgtcatacagatcttccacttggcttgggttagagt
cacaccaagatatttttaaattattttgtgactattggtgaaggggtggt
cattttcctaatttctttctcagcctggtttatcctttggagtatatgaa
gggctactgaattggtttggagttaattttgtatccagctcctttggctg
aagtgtttatcagttgtagttctctggtgcatttttttgggggtagcttt
ctgtacacataatcatattatcttcaaataggtggtatcttggatcttcc
caatccaacttgattcattccaactgactcattggtggctactgcccagc
cagaacttgaagataccataccgtgaggactatt
gaattcagtctccgtctgtggagaacaaacagcctgatatggatgaacag
gaaacgattaataacttttctacttcatgccaaaagacacattagtcgtg
tgtattaattgtatacacgaagaagctgctttgaaacccatgaaatgaaa
tataagctattttgcaagccaaaaaaaaaataaattgaggattttgcttg
attatctctgcaagaaactcatggcattaaaagaaaaagtttagctttcc
caggcccactacatatgactgttacatgaataacccaaacctggctttcc
tgcattggaactacattgatacccaaaaatacaataatttaataggacaa
aagaagaacatatacacataaaaaagagtcacatagaaaaacagaaatgg
tttcatgagagaagatacaaaagacttttctagtaattcattagtacagt
attgaaaccccaacacattggctattctcttgcaaaactggcaacttctg
tgccttccttctaccctgaccactttcctttgtggtcctgtctattcttt
gtttgtttttggtttggtttggtttggttttgctttttatgagacagggt
ttctctgtatagccctggctgtcctagtactctgtagaccaggctggcct
tgaactcagaaatttgcctgcttctgcctctgcctctgcctctgcctctg
cctctgcctctgcctctgcctctgcctctgcctctgcctctgcctctgcc
tctgcctctgcctctgcctctgcctctgcctctgcctctgcctctgcctc
tgcctctgcctctgcctctgcctctgcctctgcctctgcctctgcctctg
cctctgccttccaagtgctgggattaagggcgtgcgccactactgccctg
cccggcttggtcctgtccattctataatcatcacatctcatcactggatt
cacccatgccacattgtttttacatagattatgcttcatctctgtggaaa
aatgatagtcagtcacgtatatctatactatctttttatctcctctcctg
cttcatttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_55538218_55539293
seq2: B6Ng01-255I16.g_67_1126

seq1  GAATTCAGTCTCCGTCTGTGGAGAACAAACAGCCTGATATGGATGAACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCTCCGTCTGTGGAGAACAAACAGCCTGATATGGATGAACAG  50

seq1  GAAACGATTAATAACTTTTCTACTTCATGCCAAAAGACACATTAGTCGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACGATTAATAACTTTTCTACTTCATGCCAAAAGACACATTAGTCGTG  100

seq1  TGTATTAATTGTATACACGAAGAAGCTGCTTTGAAACCCATGAAATGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTAATTGTATACACGAAGAAGCTGCTTTGAAACCCATGAAATGAAA  150

seq1  TATAAGCTATTTTGCAAGCCAAAAAAAAAATAAATTGAGGATTTTGCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGCTATTTTGCAAGCCAAAAAAAAAATAAATTGAGGATTTTGCTTG  200

seq1  ATTATCTCTGCAAGAAACTCATGGCATTAAAAGAAAAAGTTTAGCTTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTCTGCAAGAAACTCATGGCATTAAAAGAAAAAGTTTAGCTTTCC  250

seq1  CAGGCCCACTACATATGACTGTTACATGAATAACCCAAACCTGGCTTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCCACTACATATGACTGTTACATGAATAACCCAAACCTGGCTTTCC  300

seq1  TGCATTGGAACTACATTGATACCCAAAAATACAATAATTTAATAGGACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTGGAACTACATTGATACCCAAAAATACAATAATTTAATAGGACAA  350

seq1  AAGAAGAACATATACACATAAAAAAGAGTCACATAGAAAAACAGAAATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAACATATACACATAAAAAAGAGTCACATAGAAAAACAGAAATGG  400

seq1  TTTCATGAGAGAAGATACAAAAGACTTTTCTAGTAATTCATTAGTACAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGAGAGAAGATACAAAAGACTTTTCTAGTAATTCATTAGTACAGT  450

seq1  ATTGAAACCCCAACACATTGGCTATTCTCTTGCAAAACTGGCAACTTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAACCCCAACACATTGGCTATTCTCTTGCAAAACTGGCAACTTCTG  500

seq1  TGCCTTCCTTCTACCCTGACCACTTTCCTTTGTGGTCCTGTCTATTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCCTTCTACCCTGACCACTTTCCTTTGTGGTCCTGTCTATTCTTT  550

seq1  GTTTGTTTTTGGTTTGGTTTGGTTTGGTTTTGCTTTTTATGAGACAGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTTTGGTTTGGTTTGGTTTGGTTTTGCTTTTTATGAGACAGGGT  600

seq1  TTCTCTGTATAGCCCTGGCTGTCCTAGTACTCTGTAGACCAGGCTGGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTATAGCCCTGGCTGTCCTAGTACTCTGTAGACCAGGCTGGCCT  650

seq1  TGAACTCAGAAATTTGCCTGCTTCTGCCTCTGCCTCTGCCTCTGCCTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCAGAAATTTGCCTGCTTCTGCCTCTGCCTCTGCCTCTGCCTCTG  700

seq1  CCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCC  750

seq1  TCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTC  800

seq1  TGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTG  850

seq1  CCTC------CCAAGTGCTGGGATTAAAGGCGTGCGCCACTACTGCCCTG  894
      ||||      ||||||||||||||||| ||||||||||||||||||||||
seq2  CCTCTGCCTTCCAAGTGCTGGGATTAAGGGCGTGCGCCACTACTGCCCTG  900

seq1  CCCGGCTTGGTCCTGTCCATTCTTATAATCATCACAATCTCATTCAACTG  944
      |||||||||||||||||||||| |||||||||||| |||||||   ||||
seq2  CCCGGCTTGGTCCTGTCCATTC-TATAATCATCAC-ATCTCAT--CACTG  946

seq1  GAATTCACCCATGCCACATGTTTTTTACAATAGATTATGCTTCAATCTCT  994
      | |||||||||||||||||  ||||||| |||||||||||||| ||||||
seq2  G-ATTCACCCATGCCACATTGTTTTTAC-ATAGATTATGCTTC-ATCTCT  993

seq1  GTTGAAAAAAAATGAATAGTCAAGTCAACGTATAATCTTAATACTATTTC  1044
      || |   ||||||| |||||| |||| |||||| ||||  |||||||   
seq2  GTGG---AAAAATG-ATAGTC-AGTC-ACGTAT-ATCT--ATACTAT---  1031

seq1  TTTTTTATCTCCTCCTTCTTGCTATCATTTAA  1076
       |||||||||||||  || |||| ||||||||
seq2  CTTTTTATCTCCTC--TCCTGCT-TCATTTAA  1060