BAC Information

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BAC

Clone NameB6Ng01-256M19
Chromosome16 (Build37)
Map Location 16,140,683 - 16,141,581
singlet/doubletsinglet
Overlap gene2310008H04Rik
Upstream geneLOC665653, LOC385748, LOC100042743, LOC547302, EG632352, Ube2v2, LOC665682, Mcm4, Prkdc, 2410018G20Rik, Cebpd, LOC100043266
Downstream geneLOC224010, D16Ertd727e, Pkp2, EG433003, Yars2, Dnm1l, LOC665743, Fgd4, Olfr19, 4933404G15Rik, Spag6, EG665562, EG436405, Vpreb1, Top3b, Ppm1f, LOC100042783, EG623519, Mapk1, Ypel1, Ppil2, 2610318N02Rik, Sdf2l1, LOC623568, Ccdc116
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256M19.bB6Ng01-256M19.g
ACCGA062665GA062666
length1,209948
definitionB6Ng01-256M19.b B6Ng01-256M19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtaagaatgttgcctattcagtgacattcagaattgcctctag
tattgtaagagagatagtgaaagaaatcaggctttactatctactacata
gagttagaaatctcagggcaagcttaacaacgtaagtttagaattcttat
tatagttatgtatggcaaactacattacttattagtagaaagtcctccca
cactatcacttagaataaaagccaagtcgctcccatatagaggaatttac
aatggtttaggaagtagattgggctgtggttttagagtattgcattattc
atgagaaggttagctagagcggaactcccgaattaaaaccatgacttggg
catgaacaccgttgccctgggagtgtaaagacctcacacctggcttctac
gaatatagctgaccttagatagagctgactttgtctcacttgttttattg
cccagttcctgccagtctttatgtttgcattcctctgttttgtgttagag
tcattaagcatccagtaacctcattgtaccctgacgatgtgtcacctaac
ttccctattttcttctgtattaaaagttggatgctcaatttaacaaatta
catccagatacagcacaatcgccaactccttgcccacctgtactggaacc
ctgttttccttcggatcgaggacccaactgaggtccgtctgcagcagcta
cataaacaagaatcagcattttgctgcatacaggaaaccaacctcaggga
caaagacagacagtacctcagagtaaaaagctggaaaacaattttccaag
caaatggtcccaagaacaagctggaggagccattctaatatcaaataaaa
tcgacattcaacctaaacttatcaaaaaagacaaggagggacacttcata
ctcatcaaagtaaatctaccaagatgaactcttaattctgacatctacaa
atgcaagggcatccatattcattaagaaactttaggtaaagctcaagcac
acattgtaccgcacacaataatagtgggagacttcaacaccccaactctc
atcaatggacagatcctggaaacagaaactaaacagaagaacccgtgaac
ctaacgaagttatgaaacaaattacataaccgaatattcttataccaata
tttatcctgagccagattaccttcttctcagaccctcgatgtaacgtctt
ccaagaact
gaattcaaagcatgacaaagaaaagtagtgctttgaaaaataagagaatt
ccaaagaaactggctacaataggctagatactcaggatcttctccattca
tgacaatagctttcttaccaggatctcagaggtgtcctgaaatccttctc
cacacttgagccatgctttagagagagagtcagctgcttccactgtcttg
aaatttccccgtctcaactgctgtgacctctcttctcgaaaggatgggtg
ttctatatgccaattccttttcctctgcagaagtgatttttaaagaaaaa
gaaaaccaactttgttataataaatacaattagcaatttagaacccagaa
atggttgtagtaaaagcatagtctttgaatgactcggaaacttgacatgg
atatagatagcaaccagatagtaaaaccaatcatcttattagatgccgaa
aaggcatttgacaaaatacaacacgttaaatgtattagacagatcaggaa
ttcaaggcccatatctaaacataataaaagcaatatacaggaaactaaca
gccaatatcaaattaaatggagatgtacttgaagcaatcccactaaaatc
agtgacaagacaaggctgaccactctccctgtatctattcaatatagtac
tcgaagttctagctagagcaataagataacaaaaggaaatcaaggggata
caaattggcaaagaagtagttaaggtatcactatttgcagataatatgac
agtatacataagcaactaaaataaaatctaccagacaacttctacagatg
ataaacatcttcagcaaaatggctggatataaaattaactccaacaaatc
agtagccttcttctactcaaaggataaatgggctgagaagaattagggaa
acaacactcttcacaatagtcacaaaaatataaaatgtctgggggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_16140683_16141581
seq2: B6Ng01-256M19.g_67_963

seq1  GAATTCAAAGCATGACAAAGAAAAGTAGTGCTTTGAAAAATAAGAGAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGCATGACAAAGAAAAGTAGTGCTTTGAAAAATAAGAGAATT  50

seq1  CCAAAGAAACTGGCTACAATAGGCTAGATACTCAGGATCTTCTCCATTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGAAACTGGCTACAATAGGCTAGATACTCAGGATCTTCTCCATTCA  100

seq1  TGACAATAGCTTTCTTACCAGGATCTCAGAGGTGTCCTGAAATCCTTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATAGCTTTCTTACCAGGATCTCAGAGGTGTCCTGAAATCCTTCTC  150

seq1  CACACTTGAGCCATGCTTTAGAGAGAGAGTCAGCTGCTTCCACTGTCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTGAGCCATGCTTTAGAGAGAGAGTCAGCTGCTTCCACTGTCTTG  200

seq1  AAATTTCCCCGTCTCAACTGCTGTGACCTCTCTTCTCGAAAGGATGGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCCCCGTCTCAACTGCTGTGACCTCTCTTCTCGAAAGGATGGGTG  250

seq1  TTCTATATGCCAATTCCTTTTCCTCTGCAGAAGTGATTTTTAAAGAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATATGCCAATTCCTTTTCCTCTGCAGAAGTGATTTTTAAAGAAAAA  300

seq1  GAAAACCAACTTTGTTATAATAAATACAATTAGCAATTTAGAACCCAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCAACTTTGTTATAATAAATACAATTAGCAATTTAGAACCCAGAA  350

seq1  ATGGTTGTAGTAAAAGCATAGTCTTTGAATGACTCGGAAACTTGACATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTGTAGTAAAAGCATAGTCTTTGAATGACTCGGAAACTTGACATGG  400

seq1  ATATAGATAGCAACCAGATAGTAAAACCAATCATCTTATTAGATGCCGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGATAGCAACCAGATAGTAAAACCAATCATCTTATTAGATGCCGAA  450

seq1  AAGGCATTTGACAAAATACAACACGTTAAATGTATTAGACAGATCAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCATTTGACAAAATACAACACGTTAAATGTATTAGACAGATCAGGAA  500

seq1  TTCAAGGCCCATATCTAAACATAATAAAAGCAATATACAGGAAACTAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGCCCATATCTAAACATAATAAAAGCAATATACAGGAAACTAACA  550

seq1  GCCAATATCAAATTAAATGGAGATGTACTTGAAGCAATCCCACTAAAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATATCAAATTAAATGGAGATGTACTTGAAGCAATCCCACTAAAATC  600

seq1  AGTGACAAGACAAGGCTGACCACTCTCCCTGTATCTATTCAATATAGTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACAAGACAAGGCTGACCACTCTCCCTGTATCTATTCAATATAGTAC  650

seq1  TCGAAGTTCTAGCTAGAGCAATAAGATAACAAAAGGAAATCAAGGGGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAAGTTCTAGCTAGAGCAATAAGATAACAAAAGGAAATCAAGGGGATA  700

seq1  CAAATTGGCAAAGAAGTAGTTAAGGTATCACTATTTGCAGATAATATGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGGCAAAGAAGTAGTTAAGGTATCACTATTTGCAGATAATATGAC  750

seq1  AGTATACATAAGCAACTAAAATAAAATCTACCAGACAACTTCTACAGATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATACATAAGCAACTAAAATAAAATCTACCAGACAACTTCTACAGATG  800

seq1  ATAAACATCTTCAGCAAAATGGCTGGATATAAAATTAACTCCAACAAATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACATCTTCAGCAAAATGGCTGGATATAAAATTAACTCCAACAAATC  850

seq1  AGTAGCCTTCTTCTACTCAAAGGATAAATGGGCTGAGAAAGAAATTAGG  899
      |||||||||||||||||||||||||||||||||||||||   |||||||
seq2  AGTAGCCTTCTTCTACTCAAAGGATAAATGGGCTGAGAA--GAATTAGG  897