BAC Information

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BAC

Clone NameB6Ng01-256N24
Chromosome16 (Build37)
Map Location 64,265,634 - 64,266,585
singlet/doubletsinglet
Overlap genenone
Upstream geneEpha3, LOC100043540
Downstream geneCkt2, 4930453N24Rik, Zfp654, LOC433036, Cggbp1, LOC668242, LOC100043815, LOC677448, Htr1f, LOC668247, LOC672931
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256N24.bB6Ng01-256N24.g
ACCGA062721GA062722
length1,186984
definitionB6Ng01-256N24.b B6Ng01-256N24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagcccttgctgtt
ctgttcaggaatttcccccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtctggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttcccttagttagagtcacgccgagatattttatatta
tttgttactattgagaagggtgttgttcctattctttctcagcctgttta
ttcttgtgtagagaaaggccatgacttgtttgagttaattttatatccag
ctacttcacccaaagctggttatcaagttcgggagttctctggtggactt
ttagcttcacttaatttatcatatcatacatctgcaaaagtgaacttctg
gaccttctctctctcaagatcattgtgctagtcgac
gaattcatgaccatagaatatccctaccaagactaggtgtttcaaactgc
gttccaataccagaaatctgtttatacttttctgataataggctcgtctt
cagcatcttcagaagtacacgagagaaggaagaataaggctgcttatttt
tttaattattgggtatttatttcatttacattaaggcttctttttgagtt
acagcacaagattaatttggaaatttctccaagacagaggatctcttagt
ctccagcactttcattctgtatagtcctatttaatgacatctttaatttt
ctggggaaactgggaatttagagtctgtgggcatctatttatttatctct
gaagcttataaattttttagacaaatcaagcactatggataaaaaaaaaa
ctgtcagaatcaaagaataacatcgggataaaatgttcccttatctgaca
catctttttcttttaattaggtatttatttcatttacatttccaatgcta
tcccaaaagtcccccacatgctcccccatccactcccccacccacccact
cccactcttggccctggcgttcccctgtactgaggcatataaagtttgca
cgaccaatgggcctctttccactgatggccgactaggccatcttctgata
cacatgcagctagagacatgagctctggggggtactgggtagttcatatt
gttgttccacctatagggttgcagatccccccagctccttgggtgctttc
tctagctcttccattgggggccctgtgatccatccaatagatgactctga
gcatccacttctgtgtttgctaggccccggcatagtctcacaagagacag
ctatatctgggttcctttcagcaaaatcttggctagtgtatgcaatgggt
gtcagcgtttgggaagctgattgtgggatggatcccttgggttatggcag
tctctagatggttcatccttttgtcctcagcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_64265634_64266585
seq2: B6Ng01-256N24.g_67_1024

seq1  GAATTCATGACCATAGAATATCCCTACCAAGACTAGGTGTTTCAAACTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGACCATAGAATATCCCTACCAAGACTAGGTGTTTCAAACTGC  50

seq1  GTTCCAATACCAGAAATCTGTTTATACTTTTCTGATAATAGGCTCGTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAATACCAGAAATCTGTTTATACTTTTCTGATAATAGGCTCGTCTT  100

seq1  CAGCATCTTCAGAAGTACACGAGAGAAGGAAGAATAAGGCTGCTTATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCTTCAGAAGTACACGAGAGAAGGAAGAATAAGGCTGCTTATTTT  150

seq1  TTTAATTATTGGGTATTTATTTCATTTACATTAAGGCTTCTTTTTGAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTATTGGGTATTTATTTCATTTACATTAAGGCTTCTTTTTGAGTT  200

seq1  ACAGCACAAGATTAATTTGGAAATTTCTCCAAGACAGAGGATCTCTTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCACAAGATTAATTTGGAAATTTCTCCAAGACAGAGGATCTCTTAGT  250

seq1  CTCCAGCACTTTCATTCTGTATAGTCCTATTTAATGACATCTTTAATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCACTTTCATTCTGTATAGTCCTATTTAATGACATCTTTAATTTT  300

seq1  CTGGGGAAACTGGGAATTTAGAGTCTGTGGGCATCTATTTATTTATCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGAAACTGGGAATTTAGAGTCTGTGGGCATCTATTTATTTATCTCT  350

seq1  GAAGCTTATAAATTTTTTAGACAAATCAAGCACTATGGATAAAAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTTATAAATTTTTTAGACAAATCAAGCACTATGGATAAAAAAAAAA  400

seq1  CTGTCAGAATCAAAGAATAACATCGGGATAAAATGTTCCCTTATCTGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGAATCAAAGAATAACATCGGGATAAAATGTTCCCTTATCTGACA  450

seq1  CATCTTTTTCTTTTAATTAGGTATTTATTTCATTTACATTTCCAATGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTTTCTTTTAATTAGGTATTTATTTCATTTACATTTCCAATGCTA  500

seq1  TCCCAAAAGTCCCCCACATGCTCCCCCATCCACTCCCCCACCCACCCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAAAGTCCCCCACATGCTCCCCCATCCACTCCCCCACCCACCCACT  550

seq1  CCCACTCTTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCTTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTGCA  600

seq1  CGACCAATGGGCCTCTTTCCACTGATGGCCGACTAGGCCATCTTCTGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACCAATGGGCCTCTTTCCACTGATGGCCGACTAGGCCATCTTCTGATA  650

seq1  CACATGCAGCTAGAGACATGAGCTCTGGGGGGTACTGGGTAGTTCATATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCAGCTAGAGACATGAGCTCTGGGGGGTACTGGGTAGTTCATATT  700

seq1  GTTGTTCCACCTATAGGGTTGCAGATCCCCCCAGCTCCTTGGGTGCTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTCCACCTATAGGGTTGCAGATCCCCCCAGCTCCTTGGGTGCTTTC  750

seq1  TCTAGCTCTTCCATTGGGGGCCCTGTGATCCATCCAATAGATGACTCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTCTTCCATTGGGGGCCCTGTGATCCATCCAATAGATGACTCTGA  800

seq1  GCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAG  850

seq1  CTATATCTGGG-TCCTTTCAGCAAAATCTT-GCTAGTGTATGCAAT-GGT  897
      ||||||||||| |||||||||||||||||| ||||||||||||||| |||
seq2  CTATATCTGGGTTCCTTTCAGCAAAATCTTGGCTAGTGTATGCAATGGGT  900

seq1  GTCAGCGTTT-GGAAGCTGATTGTGGGATGGATCCCT--GGGTATGGCAG  944
      |||||||||| ||||||||||||||||||||||||||  || ||||||||
seq2  GTCAGCGTTTGGGAAGCTGATTGTGGGATGGATCCCTTGGGTTATGGCAG  950

seq1  TCTCTAGA  952
      ||||||||
seq2  TCTCTAGA  958