BAC Information

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BAC

Clone NameB6Ng01-257B06
Chromosome16 (Build37)
Map Location 76,788,461 - 76,928,724
singlet/doubletdoublet
Overlap gene1700063K16Rik
Upstream geneSamsn1, 4930578N18Rik, LOC100039457, Nrip1, LOC100039316
Downstream geneLOC665120, Usp25, 2810055G20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257B06.bB6Ng01-257B06.g
ACCGA062869GA062870
length1,1051,186
definitionB6Ng01-257B06.b B6Ng01-257B06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,788,461 - 76,789,577)(76,927,537 - 76,928,724)
sequence
gaattcttacagctattaagttctgtatggaaaacagaaagaacaatact
tctgtggatatagaaatattcaatattcttatgaacttaaaataactatt
aggcatatgtctatgtttaataacatctattatcgtaaaaggcactcaaa
cttgggtagtagaaagttgtttctttaggctttagtcgccttactaaact
acaaaactgtggttgcccatttttcaatattttgaacattttagaacttg
actacttgccaatttggatatcaacaagaactcattcttgtttataagca
tatcctccctttaactggagttcttttcatcaggcttaagttcagcattc
aattctccatgtaagcgcctgacttgctaaggcaaatccaaaagaaagtg
caaaagaaaaaatctgaacaataatcgtttctctttaacaaatagaagag
ctccttagatgaaaaatagtatacatttgatttatttcaatgtccttaaa
acattgtttgcatctattattccatgtatatgactactttgcctgcatgt
acctatgtatgccacatatatctctggtgtccctagagtgcaaaagagtt
ggatttcttgggaccaaagactgccagctgccatataggtgctgggaaag
aaactaagtcctctggaaaagcagccattattcctaactgatgagccagc
cctccagccctacttcttatcttgttaacaagcccccgctaggttattca
acaaccaaaacctctatgaaaacaaaactatgattgtcttatagctttag
ctgataatattcattcaaaataagaccgtccggaccggaggacaggtgcc
cgcccggctggggaggcggcctaagccacagcagcagcggtcgccatctt
ggtcccgggacccgccgaacttaggaaattagtctgaacaggtgagaggg
tgcgccagagaacctgacagcttctggaacaggcagaagcacagaggggc
tgagcagcaccctgtgtgggccgggacagcggccacttcggacggagaca
ggtgcccacccgcctggggagcgcctaagcacagcagcagcgtcgcatct
ggtcc

gaattctcatagccactgtggatttacatttcccaccactgtggctgagt
aatcattcctttttggcgtcagactttgtgttttgttttgttcatggaaa
cggggcggggaggaacatcatttggtgtgaaaagccaaatgctagtctgc
tccattattaccttcacctgaaaacagaagagaacaatttgtcttttcca
tctagtgtcttaagttgtagcaatgagtgttcatttctaaatgcaattgc
tttccagctcccgctcctttgttctctgtggatcgccccggagcgttcct
ctggccctctacctctgagatttgttgaggaacacgcttgtcagtggaga
ttaagataaagtatctatgtgagcacaaaggtgagaaagaattccagtcc
ctgctgaaccggaggatccaggctatttagctcctccaggcagagggaag
ctacatcccaaatcacaagagtcaacaggttcaggggcagggtgaggggg
tgaggcattgctcaaaattccctagaaaacaagtctagtagcaggagtga
ggctaggctctgcttcttctgttaaacaccacagaaattgctcagtattt
tcgaaggtctgatgggtcagttttcttttaatttaggagcaatagtaata
ataatagtaataataataatagtaacaataataatgagtcggcatctttt
tcaaatattcaggtttcagctttcaccaaaatgtctagagttttctctgc
tcaataactaacagtctttattataatagttttatgaactatttttttct
tgaattcttctgctcctatgcctactgttatatgaagtaacttcaagcca
aatctgatatcagattccttgagttagcaagctttttgtgctcagtgtgg
aaagcaagtgctggggaaaagctaattaaaatggcagagaccagactctt
cctttaatgatgctttcttgtcaatcattggtttatttcagttaatgtag
ggcgtcccttttgtgtgcagcttacttgagcctcccaccatgctgtctca
gcacgcccagtgctagattacagccaagtccaccacacccagcttaggat
ggtggattggaaaccggaatagtgtttaatttcgaagcgattcatcacag
tctttttgcaatgtatttttatgggatgttttccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_76788461_76789577
seq2: B6Ng01-257B06.b_47_1151

seq1  GAATTCTTACAGCTATTAAGTTCTGTATGGAAAACAGAAAGAACAATACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACAGCTATTAAGTTCTGTATGGAAAACAGAAAGAACAATACT  50

seq1  TCTGTGGATATAGAAATATTCAATATTCTTATGAACTTAAAATAACTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGATATAGAAATATTCAATATTCTTATGAACTTAAAATAACTATT  100

seq1  AGGCATATGTCTATGTTTAATAACATCTATTATCGTAAAAGGCACTCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATATGTCTATGTTTAATAACATCTATTATCGTAAAAGGCACTCAAA  150

seq1  CTTGGGTAGTAGAAAGTTGTTTCTTTAGGCTTTAGTCGCCTTACTAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGTAGTAGAAAGTTGTTTCTTTAGGCTTTAGTCGCCTTACTAAACT  200

seq1  ACAAAACTGTGGTTGCCCATTTTTCAATATTTTGAACATTTTAGAACTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACTGTGGTTGCCCATTTTTCAATATTTTGAACATTTTAGAACTTG  250

seq1  ACTACTTGCCAATTTGGATATCAACAAGAACTCATTCTTGTTTATAAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTGCCAATTTGGATATCAACAAGAACTCATTCTTGTTTATAAGCA  300

seq1  TATCCTCCCTTTAACTGGAGTTCTTTTCATCAGGCTTAAGTTCAGCATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTCCCTTTAACTGGAGTTCTTTTCATCAGGCTTAAGTTCAGCATTC  350

seq1  AATTCTCCATGTAAGCGCCTGACTTGCTAAGGCAAATCCAAAAGAAAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCCATGTAAGCGCCTGACTTGCTAAGGCAAATCCAAAAGAAAGTG  400

seq1  CAAAAGAAAAAATCTGAACAATAATCGTTTCTCTTTAACAAATAGAAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGAAAAAATCTGAACAATAATCGTTTCTCTTTAACAAATAGAAGAG  450

seq1  CTCCTTAGATGAAAAATAGTATACATTTGATTTATTTCAATGTCCTTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTAGATGAAAAATAGTATACATTTGATTTATTTCAATGTCCTTAAA  500

seq1  ACATTGTTTGCATCTATTATTCCATGTATATGACTACTTTGCCTGCATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTTTGCATCTATTATTCCATGTATATGACTACTTTGCCTGCATGT  550

seq1  ACCTATGTATGCCACATATATCTCTGGTGTCCCTAGAGTGCAAAAGAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATGTATGCCACATATATCTCTGGTGTCCCTAGAGTGCAAAAGAGTT  600

seq1  GGATTTCTTGGGACCAAAGACTGCCAGCTGCCATATAGGTGCTGGGAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCTTGGGACCAAAGACTGCCAGCTGCCATATAGGTGCTGGGAAAG  650

seq1  AAACTAAGTCCTCTGGAAAAGCAGCCATTATTCCTAACTGATGAGCCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAGTCCTCTGGAAAAGCAGCCATTATTCCTAACTGATGAGCCAGC  700

seq1  CCTCCAGCCCTACTTCTTATCTTGTTAACAAGCCCCCGCTAGGTTATTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGCCCTACTTCTTATCTTGTTAACAAGCCCCCGCTAGGTTATTCA  750

seq1  ACAACCAAAACCTCTATGAAAACAAAACTATGATTGTCTTATAGCTTTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCAAAACCTCTATGAAAACAAAACTATGATTGTCTTATAGCTTTAG  800

seq1  CTGATAATATTCATTCAAAATAAGACCGTCCGGACCGGAGGACAGGTGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAATATTCATTCAAAATAAGACCGTCCGGACCGGAGGACAGGTGCC  850

seq1  CGCCCGGCTGGGGAGGCGGCCTAAGCCACAGCAGCAGCGGTCGCCATCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCGGCTGGGGAGGCGGCCTAAGCCACAGCAGCAGCGGTCGCCATCTT  900

seq1  GGT-CCGGGACCCGCCGAACTTAGGAAATTAGTCTGAACAGGTGAGAGGG  949
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCGGGACCCGCCGAACTTAGGAAATTAGTCTGAACAGGTGAGAGGG  950

seq1  TGCGCCAGAGAACCTGACAGCTTCTGGAACAGGCAGAAGCACAGAGGGGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCCAGAGAACCTGACAGCTTCTGGAACAGGCAGAAGCACAGAGGGGC  1000

seq1  TGAGGCAGCACCCTGTGTGGGCCGGGGACAGCCGGCCACCTTCCGGACCG  1049
      ||| ||||||||||||||||||| ||||||| |||||||  | |||| ||
seq2  TGA-GCAGCACCCTGTGTGGGCC-GGGACAG-CGGCCAC--TTCGGA-CG  1044

seq1  GAGGACAGGTGCCCACCCGGCTGGGGAGGCGGCCTAAGCCACAGCAGCAG  1099
      || |||||||||||||||| ||||||||   ||||||| |||||||||||
seq2  GA-GACAGGTGCCCACCCGCCTGGGGAG--CGCCTAAG-CACAGCAGCAG  1090

seq1  CGGTCGCCATCTTGGTCC  1117
      | |||| |||| ||||||
seq2  C-GTCG-CATC-TGGTCC  1105


seq1: chr16_76927537_76928724
seq2: B6Ng01-257B06.g_66_1251 (reverse)

seq1  TAGG-AAACA--CCATAAAAATACCATGCAAAAAGACCTGTGGAATGGAT  47
      |||| |||||  ||||||||||||  |||||||||| |||||  ||| ||
seq2  TAGGAAAACATCCCATAAAAATACATTGCAAAAAGA-CTGTG--ATGAAT  47

seq1  CGC-TCTGAATATAACACTATT-CTGTTTCAATTCAACAATCCTTAGCTG  95
      ||| ||  |||  ||||||||| | ||||| | || || ||||| |||||
seq2  CGCTTCGAAATTAAACACTATTCCGGTTTCCAATCCACCATCCTAAGCTG  97

seq1  GGTGTGGTGGCCTGGGCCTGTAATCCTAGCACTGGGCGTGCTGAGACAGC  145
      |||||||||| || || ||||||| |||||||||||||||||||||||||
seq2  GGTGTGGTGGACTTGG-CTGTAAT-CTAGCACTGGGCGTGCTGAGACAGC  145

seq1  ATGGTGGGAGGCTCCAAGGTAGGCTGCACCACAAAGGGACGCCCTACATT  195
      ||||||||||||||  | ||| |||||||   ||||||||||||||||||
seq2  ATGGTGGGAGGCTC--AAGTAAGCTGCACACAAAAGGGACGCCCTACATT  193

seq1  AACTGAAATAAACCAAATGATTGACAAGAAAGCATCATTAAAGGAAGAGT  245
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AACTGAAATAAACC-AATGATTGACAAGAAAGCATCATTAAAGGAAGAGT  242

seq1  CTGGTCTCTGCCATTTTAATTAGCTTTTCCCCAGCACTTGC-TTCCACAC  294
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTGGTCTCTGCCATTTTAATTAGCTTTTCCCCAGCACTTGCTTTCCACAC  292

seq1  TGAGCACAAAAAGCTTGCTAACTCAAGGAATCTGATATCAGATTTGGCTT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCACAAAAAGCTTGCTAACTCAAGGAATCTGATATCAGATTTGGCTT  342

seq1  GAAGTTACTTCATATAACAGTAGGCATAGGAGCAGAAGAATTCAAGAAAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTACTTCATATAACAGTAGGCATAGGAGCAGAAGAATTCAAGAAAA  392

seq1  AAATAGTTCATAAAACTATTATAATAAAGACTGTTAGTTATTGAGCAGAG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTTCATAAAACTATTATAATAAAGACTGTTAGTTATTGAGCAGAG  442

seq1  AAAACTCTAGACATTTTGGTGAAAGCTGAAACCTGAATATTTGAAAAAGA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCTAGACATTTTGGTGAAAGCTGAAACCTGAATATTTGAAAAAGA  492

seq1  TGCCGACTCATTATTATTGTTACTATTATTATTATTACTATTATTATTAC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGACTCATTATTATTGTTACTATTATTATTATTACTATTATTATTAC  542

seq1  TATTGCTCCTAAATTAAAAGAAAACTGACCCATCAGACCTTCGAAAATAC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCTCCTAAATTAAAAGAAAACTGACCCATCAGACCTTCGAAAATAC  592

seq1  TGAGCAATTTCTGTGGTGTTTAACAGAAGAAGCAGAGCCTAGCCTCACTC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAATTTCTGTGGTGTTTAACAGAAGAAGCAGAGCCTAGCCTCACTC  642

seq1  CTGCTACTAGACTTGTTTTCTAGGGAATTTTGAGCAATGCCTCACCCCCT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTACTAGACTTGTTTTCTAGGGAATTTTGAGCAATGCCTCACCCCCT  692

seq1  CACCCTGCCCCTGAACCTGTTGACTCTTGTGATTTGGGATGTAGCTTCCC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTGCCCCTGAACCTGTTGACTCTTGTGATTTGGGATGTAGCTTCCC  742

seq1  TCTGCCTGGAGGAGCTAAATAGCCTGGATCCTCCGGTTCAGCAGGGACTG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTGGAGGAGCTAAATAGCCTGGATCCTCCGGTTCAGCAGGGACTG  792

seq1  GAATTCTTTCTCACCTTTGTGCTCACATAGATACTTTATCTTAATCTCCA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTCACCTTTGTGCTCACATAGATACTTTATCTTAATCTCCA  842

seq1  CTGACAAGCGTGTTCCTCAACAAATCTCAGAGGTAGAGGGCCAGAGGAAC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAAGCGTGTTCCTCAACAAATCTCAGAGGTAGAGGGCCAGAGGAAC  892

seq1  GCTCCGGGGCGATCCACAGAGAACAAAGGAGCGGGAGCTGGAAAGCAATT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCGGGGCGATCCACAGAGAACAAAGGAGCGGGAGCTGGAAAGCAATT  942

seq1  GCATTTAGAAATGAACACTCATTGCTACAACTTAAGACACTAGATGGAAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTAGAAATGAACACTCATTGCTACAACTTAAGACACTAGATGGAAA  992

seq1  AGACAAATTGTTCTCTTCTGTTTTCAGGTGAAGGTAATAATGGAGCAGAC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAATTGTTCTCTTCTGTTTTCAGGTGAAGGTAATAATGGAGCAGAC  1042

seq1  TAGCATTTGGCTTTTCACACCAAATGATGTTCCTCCCCGCCCCGTTTCCA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATTTGGCTTTTCACACCAAATGATGTTCCTCCCCGCCCCGTTTCCA  1092

seq1  TGAACAAAACAAAACACAAAGTCTGACGCCAAAAAGGAATGATTACTCAG  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAAAACAAAACACAAAGTCTGACGCCAAAAAGGAATGATTACTCAG  1142

seq1  CCACAGTGGTGGGAAATGTAAATCCACAGTGGCTATGAGAATTC  1188
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTGGTGGGAAATGTAAATCCACAGTGGCTATGAGAATTC  1186


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