BAC Information

Click to search

BAC

Clone NameB6Ng01-257K15
Chromosome16 (Build37)
Map Location 92,345,833 - 92,484,436
singlet/doubletdoublet
Overlap geneKcne1, Dscr1, 2410124H12Rik
Upstream geneIfnar2, Il10rb, Ifnar1, LOC665939, LOC665947, Ifngr2, Tmem50b, ORF28, Gart, Son, Donson, Cryzl1, LOC100040653, Itsn1, Atp5o, Mrps6, Slc5a3, Kcne2, 1190017O12Rik, 4930563D23Rik
Downstream geneClic6, Runx1, EG666023, LOC100040747
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257K15.bB6Ng01-257K15.g
ACCGA063303GA063304
length1,0291,112
definitionB6Ng01-257K15.b B6Ng01-257K15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,483,407 - 92,484,436)(92,345,833 - 92,346,846)
sequence
gaattcatgacgtgcccaactgtaccaagtacttggcatgcctctgtgcc
cagggacctagactccaaagccttcctatgtttccaagggttggccctat
gttggatctctttgtaggagtcaaggtcccagcaggaccagcgaaaagaa
ttcatgtggaaaaaactggacagcccatgcaaggcaggctctccctttct
cataggattgggaagatgtgtgaggccattggaagacatattagtactag
gattgcttctcccggaagacagcatgaatctgtttgtctgaaataacttc
agagcttgcacgtttaatgtgtatacaggtcttaaatgctgtgatttgga
ggtgactagattggacaaggttgttctatttattccagggctttaaaata
aacacttagagcaaaggtttcaaggctccaaaacttgaaagtggaatgga
catctcattgcctggttccttgaagcatcatctatgtgtatacctgtaca
cacgtacataagcacttgtgagtgtgtgcatatgtggaagctagatatta
acctccggtaacattccttaggatgctgtctgccttggtatgcttgtttg
tttgtttactccattttgattttagacaggatctctcagtggtctggaac
tccctgactcagttagactggctgtggccagtaagctacaagggtctttt
tctttttacctccccagtgatgaaattccaagccacaccttgcttttaaa
caatgtctctataaggcaaactcagggctgtgtgtttgcatggcaagcat
tcaacacctgaattatctcctctgcccacggtctgcaaagtcttgatgaa
actgaaataagcaaccatgaacgatagaaacatggcattttatagttcct
tggaggtaacttggtagcccaatctgtttgtttgcatacactaatgaaga
cctgcttcaaggacacattgtataaagcccttatgagaactgttctttac
ttgtcacggtaaatctcttcctgaagaga
gaattcaaaggattctgttgacccaaataattcaaggagagtagcaattc
ggagggtgatccatgacagggttctgatgtggagagtcctgcctcccacc
cccaacacacacacacacacactcacacacacatacacacacacacacac
acacacacacacacacacacactcacacacacatacacacacacacactc
acacacacacacactcacacacacatacacacacacacacacacacacat
acacacacacacacacacacacacacacacacacacacacacacatacac
acacacacacacacacacacacacacacacacacacacacaaaggatccc
tgccttataggaaatgagagcttgagtcagaccgagtcaaatgtgtctac
tgagaacagtcagtgctgtgggggttgcttttaattagattgtattgtgt
atttaaatcttctttattattgttttatagtgtatggtatgtgtgcgtgt
acacactgtatatcatgtggagaacggaggacaattctctgaagtctgtc
ttctccttccacccaccatgggttctggggatcaaactgcagtcacctct
ctgtgccaggccatcttgctaagcccggtgttcagctttccaaaacttgt
gtctcagtgagtgttccatactctccaggagtgcctggcggtgagctttc
aaagtaccatggtgcgaaggatcctttgtgtcttcaggaggcagccagag
aaggctgatccacaggacagtgattccccatgctcctagggaacgtagcc
tgaggagcctttgctgccaactgcagctctggtgccccctctccgctcca
ctcccatgggttccttctggctgggggggagtgggggaggggcagcaaat
actgcattgggcttgttcttagactgcttttatcaaagtcctcccaaggc
aacaggcggggcaattgtgtccccatgtttcctcaaagcctggaattggg
aaacccaagggctttgggaagggccctctattgtccttgggacacggcca
caagggaacacaatttgtttctcttttttgagagtcccagggggcccata
ttcgtgtccccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_92483407_92484436
seq2: B6Ng01-257K15.b_44_1072 (reverse)

seq1  TCTCTCTCAGG-AGAGATTTACCGTGACAAGTAAAG-ACAGTTCTCATTA  48
      ||||| ||||| |||||||||||||||||||||||| |||||||||| ||
seq2  TCTCT-TCAGGAAGAGATTTACCGTGACAAGTAAAGAACAGTTCTCA-TA  48

seq1  AGGGCTTTATACAATGTGTCCTTGAAGCAGGTCTTTCATTAGTGTATGCA  98
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGGGCTTTATACAATGTGTCCTTGAAGCAGGTC-TTCATTAGTGTATGCA  97

seq1  AACAAACAGATTGGGCTACCAAGTTACCTCCAAGGAACTATAAAATGCCA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAGATTGGGCTACCAAGTTACCTCCAAGGAACTATAAAATGCCA  147

seq1  TGTTTCTATCGTTCATGGTTGCTTATTTCAGTTTCATCAAGACTTTGCAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTATCGTTCATGGTTGCTTATTTCAGTTTCATCAAGACTTTGCAG  197

seq1  ACCGTGGGCAGAGGAGATAATTCAGGTGTTGAATGCTTGCCATGCAAACA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTGGGCAGAGGAGATAATTCAGGTGTTGAATGCTTGCCATGCAAACA  247

seq1  CACAGCCCTGAGTTTGCCTTATAGAGACATTGTTTAAAAGCAAGGTGTGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCCTGAGTTTGCCTTATAGAGACATTGTTTAAAAGCAAGGTGTGG  297

seq1  CTTGGAATTTCATCACTGGGGAGGTAAAAAGAAAAAGACCCTTGTAGCTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAATTTCATCACTGGGGAGGTAAAAAGAAAAAGACCCTTGTAGCTT  347

seq1  ACTGGCCACAGCCAGTCTAACTGAGTCAGGGAGTTCCAGACCACTGAGAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCCACAGCCAGTCTAACTGAGTCAGGGAGTTCCAGACCACTGAGAG  397

seq1  ATCCTGTCTAAAATCAAAATGGAGTAAACAAACAAACAAGCATACCAAGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTCTAAAATCAAAATGGAGTAAACAAACAAACAAGCATACCAAGG  447

seq1  CAGACAGCATCCTAAGGAATGTTACCGGAGGTTAATATCTAGCTTCCACA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGCATCCTAAGGAATGTTACCGGAGGTTAATATCTAGCTTCCACA  497

seq1  TATGCACACACTCACAAGTGCTTATGTACGTGTGTACAGGTATACACATA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACACACTCACAAGTGCTTATGTACGTGTGTACAGGTATACACATA  547

seq1  GATGATGCTTCAAGGAACCAGGCAATGAGATGTCCATTCCACTTTCAAGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATGCTTCAAGGAACCAGGCAATGAGATGTCCATTCCACTTTCAAGT  597

seq1  TTTGGAGCCTTGAAACCTTTGCTCTAAGTGTTTATTTTAAAGCCCTGGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGCCTTGAAACCTTTGCTCTAAGTGTTTATTTTAAAGCCCTGGAA  647

seq1  TAAATAGAACAACCTTGTCCAATCTAGTCACCTCCAAATCACAGCATTTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGAACAACCTTGTCCAATCTAGTCACCTCCAAATCACAGCATTTA  697

seq1  AGACCTGTATACACATTAAACGTGCAAGCTCTGAAGTTATTTCAGACAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTGTATACACATTAAACGTGCAAGCTCTGAAGTTATTTCAGACAAA  747

seq1  CAGATTCATGCTGTCTTCCGGGAGAAGCAATCCTAGTACTAATATGTCTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTCATGCTGTCTTCCGGGAGAAGCAATCCTAGTACTAATATGTCTT  797

seq1  CCAATGGCCTCACACATCTTCCCAATCCTATGAGAAAGGGAGAGCCTGCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGGCCTCACACATCTTCCCAATCCTATGAGAAAGGGAGAGCCTGCC  847

seq1  TTGCATGGGCTGTCCAGTTTTTTCCACATGAATTCTTTTCGCTGGTCCTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATGGGCTGTCCAGTTTTTTCCACATGAATTCTTTTCGCTGGTCCTG  897

seq1  CTGGGACCTTGACTCCTACAAAGAGATCCAACATAGGGCCAACCCTTGGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGACCTTGACTCCTACAAAGAGATCCAACATAGGGCCAACCCTTGGA  947

seq1  AACATAGGAAGGCTTTGGAGTCTAGGTCCCTGGGCACAGAGGCATGCCAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGGAAGGCTTTGGAGTCTAGGTCCCTGGGCACAGAGGCATGCCAA  997

seq1  GTACTTGGTACAGTTGGGCACGTCATGAATTC  1030
      ||||||||||||||||||||||||||||||||
seq2  GTACTTGGTACAGTTGGGCACGTCATGAATTC  1029

seq1: chr16_92345833_92346846
seq2: B6Ng01-257K15.g_69_1108

seq1  GAATTCAAAGGATTCTG-GGACCCAAATAATTCAAGGAGAGTAGCAATTC  49
      |||||||||||||||||  |||||||||||||||||||||||||||||||
seq2  GAATTCAAAGGATTCTGTTGACCCAAATAATTCAAGGAGAGTAGCAATTC  50

seq1  GGAGGGTGATCCATGACAGGGTTCTGATGTGGAGAGTCCTGCCTCCCACC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGTGATCCATGACAGGGTTCTGATGTGGAGAGTCCTGCCTCCCACC  100

seq1  CCCAACACACACACACACACACTCACACACACATACACACACACACACAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACACACACACACACACACTCACACACACATACACACACACACACAC  150

seq1  ACACACACACACACACACACACTCACACACACATACACACACACACACTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACTCACACACACATACACACACACACACTC  200

seq1  ACACACACACACACTCACACACACATACACACACACACACACACACACAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACTCACACACACATACACACACACACACACACACACAT  250

seq1  ACACACACACACACACACACACACACACACACACACACACACACATACAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACACACACATACAC  300

seq1  ACACACACACACACACACACACACACACACACACACACACAAAGGATCCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACACAAAGGATCCC  350

seq1  TGCCTTATAGGAAATGAGAGCTTGAGTCAGACCGAGTCAAATGTGTCTAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTATAGGAAATGAGAGCTTGAGTCAGACCGAGTCAAATGTGTCTAC  400

seq1  TGAGAACAGTCAGTGCTGTGGGGGTTGCTTTTAATTAGATTGTATTGTGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAACAGTCAGTGCTGTGGGGGTTGCTTTTAATTAGATTGTATTGTGT  450

seq1  ATTTAAATCTTCTTTATTATTGTTTTATAGTGTATGGTATGTGTGCGTGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATCTTCTTTATTATTGTTTTATAGTGTATGGTATGTGTGCGTGT  500

seq1  ACACACTGTATATCATGTGGAGAACGGAGGACAATTCTCTGAAGTCTGTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTGTATATCATGTGGAGAACGGAGGACAATTCTCTGAAGTCTGTC  550

seq1  TTCTCCTTCCACCCACCATGGGTTCTGGGGATCAAACTGCAGTCACCTCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTTCCACCCACCATGGGTTCTGGGGATCAAACTGCAGTCACCTCT  600

seq1  CTGTGCCAGGCCATCTTGCTAAGCCCGGTGTTCAGCTTTCCAAAACTTGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCCAGGCCATCTTGCTAAGCCCGGTGTTCAGCTTTCCAAAACTTGT  650

seq1  GTCTCAGTGAGTGTTCCATACTCTCCAGGAGTGCCTGGCAGGTGAGCTTT  699
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GTCTCAGTGAGTGTTCCATACTCTCCAGGAGTGCCTGGC-GGTGAGCTTT  699

seq1  CAAAGTACCATGGTGCGAAGGATCC-TTGTGTCTTCAGGAGGCAGCCGGA  748
      ||||||||||||||||||||||||| ||||||||||||||||||||| ||
seq2  CAAAGTACCATGGTGCGAAGGATCCTTTGTGTCTTCAGGAGGCAGCCAGA  749

seq1  GAAGGCTGATCCACAGGACAGTGATTCCCCATGCTCCTAGGGAACGTAGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTGATCCACAGGACAGTGATTCCCCATGCTCCTAGGGAACGTAGC  799

seq1  CTGAGGAGCCTTTGCTGCCAACTGCAGCTCTGGTGCCCCCTCTCCGCTCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAGCCTTTGCTGCCAACTGCAGCTCTGGTGCCCCCTCTCCGCTCC  849

seq1  ACTCCCAT-GGTTCCTTCTGGCT-GGGGGGAGTGGGGGAGGGGCAGCAGA  896
      |||||||| |||||||||||||| |||||||||||||||||||||||| |
seq2  ACTCCCATGGGTTCCTTCTGGCTGGGGGGGAGTGGGGGAGGGGCAGCAAA  899

seq1  TACTGCATTGG--CTGT--CTAGACTGC-TTTATCAAAGT-CTCCCAA-G  939
      |||||||||||   |||   |||||||| ||||||||||| ||||||| |
seq2  TACTGCATTGGGCTTGTTCTTAGACTGCTTTTATCAAAGTCCTCCCAAGG  949

seq1  CAACAGGCGGG--CATTGT---CCCATGTT--CTCAAAG-CTGGAGTTGG  981
      |||||||||||   |||||   ||||||||  ||||||| ||||| ||||
seq2  CAACAGGCGGGGCAATTGTGTCCCCATGTTTCCTCAAAGCCTGGAATTGG  999

seq1  AAA---CAAGGGCTT--GGGAGGGC---CTCATGTCCTTGG  1014
       ||   |||||||||  || |||||   ||  |||||||||
seq2  GAAACCCAAGGGCTTTGGGAAGGGCCCTCTATTGTCCTTGG  1040