BAC Information

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BAC

Clone NameB6Ng01-258H10
Chromosome16 (Build37)
Map Location 69,526,626 - 69,527,790
singlet/doubletsinglet
Overlap genenone
Upstream geneEG626609
Downstream geneSpeer2, EG664930, Gbe1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258H10.bB6Ng01-258H10.g
ACCGA063896GA063897
length1,1611,189
definitionB6Ng01-258H10.b B6Ng01-258H10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttgcttttcctcttgaagtgctataagcagatttcactgata
atacattatagaactgccaagagttcattagacaagttctcttatagata
aatcaaggtcatttatagtgtctgtatatattgagcacaagaattcattg
ggaaaaataatcaaagctgttacatttagaaaaacctaagcatccttttc
tttataaaccccataattttgtgatttctaaaagacactctttgtaagca
tgcactttcaaaactacaaaaattcataaagcgatccatattttgactgc
aatgtctttttctgcgtactctacttaaaatgtgttctatggctcatcag
acacatctgactattgtttaaaagaccaaatagcagcgtgacaatacaat
tgctttttttttttaattagtgtgggaccttagaagacttaatgctaaga
aggatactattgcaagtgacattttaacaagtgagtttctcagcataatt
tttattttaaaagtcccagtggtagaactgtgagattctacaatgccaaa
acagaattttccttgataaaacatttaatataaccccataatcccagaag
tttctttatatttattaaacttctgaatggaaactatgaactcattatct
tccacaatttatcccttattttctgggtgagcattatagtcaaaattaaa
tttgctttgaaaatgctttagtaatgtaataataccttgtacgagctaat
tccttatagtatacctcttcagcatctgcacatttctcagcattcaacaa
atgtctcaagtgtctaataattatatttgacattgtagaaaatgtgatag
aaaaccagttattcatttctcttcattcatttgctccattattcattttt
taaataatcagtgtgtatgaaatgccaactactgtgggtataaaatatgg
tccccctcatcaaagaacagttaagtacctcttgtatccttcaaagattt
cattaatatataatatagacacacttttatattttatttatattgtttga
cttggattcataataaacttctgttacatttttattcttcatttatgttt
atgtctcttaccacaacaaaccatactcaatacttcattaacaccaagtc
acattcacagc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
tccaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagataaaaaattcaggtgacagc
agatgctggcaaggatgtagagaaagaggaacactcctccatttttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatcctgcaatacctttcctgggc
atttatccagaagacattcaatccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaacgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagcgaggtaacccagtcacaaa
gaaactcacacaatatgtactcactgataagtggatattagcccagaact
taggatacccaagatataagatacaatttgccaaatgcatgaaactcaag
aagaatgaagtccaaagtgtgaacactgtgccccttcttagaattgggaa
caaaacacccatggaaggatctacagaaacaaagtttagagctgtgacaa
aaggatggaccatctagagactgccatactacagatccaacccataatca
gcttccaaacgctgacaccattgcataccctagcaagattttgctgaaag
gacccagatatagctgtctcttgtgagactatgctggagcctagcaaaca
cagaagtgatgctcacagtcagctattggatggatcacagggcacccaat
ggagaagctagagaaagtatccaagagctaaagagatctgcaccctgtag
gtgcaacacatatgactaaccagtactcggagctctttgtctgtagctac
atatgtacaagatggctagttcgcatcactgaagaagaggcccattgaca
cacaaacctttatatgcccagtacaggaaccaggtcaaaattggtaatgc
tgcaagggataaagttgggggatacaaatcagataacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_69526626_69527790
seq2: B6Ng01-258H10.b_43_1203 (reverse)

seq1  GCTGTGAAATGTGACTTTGGTGTTTATGGAGTA-TGAGTAT-GTTTGTGT  48
      |||||| |||||||| |||||||| ||| |||| ||||||| |||||| |
seq2  GCTGTG-AATGTGAC-TTGGTGTTAATGAAGTATTGAGTATGGTTTGT-T  47

seq1  GTGTAAAGAGACAATTAAACATAAATGAAG-ATAAAAATGTAACAGAAGT  97
      |||  ||||||||  ||||||||||||||| |||||||||||||||||||
seq2  GTGGTAAGAGACA--TAAACATAAATGAAGAATAAAAATGTAACAGAAGT  95

seq1  TTTATATGAATCCAAGTCAAACAATTATATATAAAATATAAAAGTGTGTC  147
      ||  |||||||||||||||||||| |||| ||||||||||||||||||||
seq2  TTATTATGAATCCAAGTCAAACAA-TATAAATAAAATATAAAAGTGTGTC  144

seq1  TATATTATAATATTAATGAAATCTTTGAAGGATACAAGAGGTACTTAACT  197
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TATATTAT-ATATTAATGAAATCTTTGAAGGATACAAGAGGTACTTAACT  193

seq1  GTTCTTTGATGAGGGGGACCATATTTTATACCCACAGTAGTTGGCATTTC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTGATGAGGGGGACCATATTTTATACCCACAGTAGTTGGCATTTC  243

seq1  ATACACACTGATTATTTAAAAAATGAATAATGGAGCAAATGAATGAAGAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACTGATTATTTAAAAAATGAATAATGGAGCAAATGAATGAAGAG  293

seq1  AAATGAATAACTGGTTTTCTATCACATTTTCTACAATGTCAAATATAATT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAATAACTGGTTTTCTATCACATTTTCTACAATGTCAAATATAATT  343

seq1  ATTAGACACTTGAGACATTTGTTGAATGCTGAGAAATGTGCAGATGCTGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGACACTTGAGACATTTGTTGAATGCTGAGAAATGTGCAGATGCTGA  393

seq1  AGAGGTATACTATAAGGAATTAGCTCGTACAAGGTATTATTACATTACTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTATACTATAAGGAATTAGCTCGTACAAGGTATTATTACATTACTA  443

seq1  AAGCATTTTCAAAGCAAATTTAATTTTGACTATAATGCTCACCCAGAAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTTTCAAAGCAAATTTAATTTTGACTATAATGCTCACCCAGAAAA  493

seq1  TAAGGGATAAATTGTGGAAGATAATGAGTTCATAGTTTCCATTCAGAAGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGATAAATTGTGGAAGATAATGAGTTCATAGTTTCCATTCAGAAGT  543

seq1  TTAATAAATATAAAGAAACTTCTGGGATTATGGGGTTATATTAAATGTTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAATATAAAGAAACTTCTGGGATTATGGGGTTATATTAAATGTTT  593

seq1  TATCAAGGAAAATTCTGTTTTGGCATTGTAGAATCTCACAGTTCTACCAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAGGAAAATTCTGTTTTGGCATTGTAGAATCTCACAGTTCTACCAC  643

seq1  TGGGACTTTTAAAATAAAAATTATGCTGAGAAACTCACTTGTTAAAATGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTTTTAAAATAAAAATTATGCTGAGAAACTCACTTGTTAAAATGT  693

seq1  CACTTGCAATAGTATCCTTCTTAGCATTAAGTCTTCTAAGGTCCCACACT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGCAATAGTATCCTTCTTAGCATTAAGTCTTCTAAGGTCCCACACT  743

seq1  AATTAAAAAAAAAAAGCAATTGTATTGTCACGCTGCTATTTGGTCTTTTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAAAAAAAAAGCAATTGTATTGTCACGCTGCTATTTGGTCTTTTA  793

seq1  AACAATAGTCAGATGTGTCTGATGAGCCATAGAACACATTTTAAGTAGAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATAGTCAGATGTGTCTGATGAGCCATAGAACACATTTTAAGTAGAG  843

seq1  TACGCAGAAAAAGACATTGCAGTCAAAATATGGATCGCTTTATGAATTTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGCAGAAAAAGACATTGCAGTCAAAATATGGATCGCTTTATGAATTTT  893

seq1  TGTAGTTTTGAAAGTGCATGCTTACAAAGAGTGTCTTTTAGAAATCACAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTTTGAAAGTGCATGCTTACAAAGAGTGTCTTTTAGAAATCACAA  943

seq1  AATTATGGGGTTTATAAAGAAAAGGATGCTTAGGTTTTTCTAAATGTAAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGGGGTTTATAAAGAAAAGGATGCTTAGGTTTTTCTAAATGTAAC  993

seq1  AGCTTTGATTATTTTTCCCAATGAATTCTTGTGCTCAATATATACAGACA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGATTATTTTTCCCAATGAATTCTTGTGCTCAATATATACAGACA  1043

seq1  CTATAAATGACCTTGATTTATCTATAAGAGAACTTGTCTAATGAACTCTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAATGACCTTGATTTATCTATAAGAGAACTTGTCTAATGAACTCTT  1093

seq1  GGCAGTTCTATAATGTATTATCAGTGAAATCTGCTTATAGCACTTCAAGA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTTCTATAATGTATTATCAGTGAAATCTGCTTATAGCACTTCAAGA  1143

seq1  GGAAAAGCAAAAGAATTC  1165
      ||||||||||||||||||
seq2  GGAAAAGCAAAAGAATTC  1161