BAC Information

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BAC

Clone NameB6Ng01-259E07
Chromosome16 (Build37)
Map Location 28,200,549 - 28,201,691
singlet/doubletsinglet
Overlap geneFgf12
Upstream geneOstn, Uts2d, Ccdc50
Downstream gene1600021P15Rik, EG666717
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259E07.bB6Ng01-259E07.g
ACCGA064492GA064493
length1,130302
definitionB6Ng01-259E07.b B6Ng01-259E07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccatcttcttcttcttcctcatggtaggtatgtacatcttccag
ggaactgcatttaaatgacagtggtaactgtctgttggaaatgcttgttg
ttagttgtagagttcgggaagctggaaaccatgtggtttcgcagtctaca
tggaaaagggggtcagggttacatttggaatgggagggaatccaagtaca
gcatacatacaactctgaaggtcaagagtggatgggacgaccatgggagg
ggtattgagtgaacttcatggacttgaataaacgatccagcattcatcca
tcatctgcattgaagtgggtggatattctgaactgtgaagaatgaggcta
agctggagaaatgtccagcaggcaaacaggaggacctgtcacgggcaagg
tgtttgagtcaaaacaggtcaaactctggtaaataatatttgtttcttaa
cactatcaacctagtcatagtgcactggaataatttatattcttctgaat
gaacaattgttaaagatggactgggttgtaagtgtatcctttccttgtcc
acatatatgatgcgtgtcggggcgggagaggggattacttcatcaaaaca
tgttttataaactctactgtaatgcctgcgctaggctgagagctcaggat
cacagaggtaagaattcacaagttgcaatgtgaattttgaagagggaaaa
ttcctccttgttatacagcccttggctctgtttgcaatatttgtcaaggc
actctagggttttgtcacttttggctccctgactgacctgtcttcactgc
acacaaaacgcattgtcagactggacagtcattgagtaatcttagaatcc
atctgaatctgtgcagttgtccacatcttggccaaaggcttttagatgag
tatgtgctttgtttcgagtgtgcttgaacataggttattggatgctagac
taatatgtgacaagagcacaaaagcaattacttgttatgtgacaaataca
gattttcaccttaaggataatgtaacagggtaataaatttgtagtttata
cgtgtgttcttgttgcattccactttgaaatacctgctttcacttgaaac
agttgatcagtttttagactacttgactct

agtgatattttgctttgttccacaatgctttatctgggcatgtctacctt
acttttctcttgcttatctaatttggatccaaatttatggtcttatgctg
tgtgtgtgtgttttcttttctttgatttttttctttttttctctctgagt
gttcattttattccataattctccctttaaattgttctctaaaggaaaag
agaaaaaattgtgttgttggattagtgggaaagtgggaaagatctgcaag
gagaggagagaggagagaggacagaggagagaggagagaggagagaggac
ag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_28200549_28201691
seq2: B6Ng01-259E07.b_43_1172 (reverse)

seq1  AGAGTTCAAGTAGGTTTCTAAAAACTGAATTCCAAATGTTTCAAGTGAAA  50
      |||| ||||||||   ||||||||||||    ||| ||||||||||| ||
seq2  AGAG-TCAAGTAG---TCTAAAAACTGA---TCAACTGTTTCAAGTG-AA  42

seq1  AGCAAGGTATTTCAAAGT-GAATGCAAACAG-ACACACGTTATAAACCTT  98
      ||| |||||||||||||| ||||||||  || ||||||| |||||||  |
seq2  AGC-AGGTATTTCAAAGTGGAATGCAACAAGAACACACG-TATAAAC--T  88

seq1  ACAAATTTATACCCCTGTTAACATTATCCTTAAGGTGAAAATCTTGTATT  148
      ||||||||||  ||||||| ||||||||||||||||||||||| |||| |
seq2  ACAAATTTATTACCCTGTT-ACATTATCCTTAAGGTGAAAATC-TGTA-T  135

seq1  TTGTCACATAACAAGTAATTGCTTTTGTGCTCTTGTCACATATTAGTCTA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACATAACAAGTAATTGCTTTTGTGCTCTTGTCACATATTAGTCTA  185

seq1  GCATCCAATAACCTATGTTCAAGCACACTCGAAACAAAGCACATACTCAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCAATAACCTATGTTCAAGCACACTCGAAACAAAGCACATACTCAT  235

seq1  CTAAAAGCCTTTGGCCAAGATGTGGACAACTGCACAGATTCAGATGGATT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGCCTTTGGCCAAGATGTGGACAACTGCACAGATTCAGATGGATT  285

seq1  CTAAGATTACTCAATGACTGTCCAGTCTGACAATGCGTTTTGTGTGCAGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATTACTCAATGACTGTCCAGTCTGACAATGCGTTTTGTGTGCAGT  335

seq1  GAAGACAGGTCAGTCAGGGAGCCAAAAGTGACAAAACCCTAGAGTGCCTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAGGTCAGTCAGGGAGCCAAAAGTGACAAAACCCTAGAGTGCCTT  385

seq1  GACAAATATTGCAAACAGAGCCAAGGGCTGTATAACAAGGAGGAATTTTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATATTGCAAACAGAGCCAAGGGCTGTATAACAAGGAGGAATTTTC  435

seq1  CCTCTTCAAAATTCACATTGCAACTTGTGAATTCTTACCTCTGTGATCCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCAAAATTCACATTGCAACTTGTGAATTCTTACCTCTGTGATCCT  485

seq1  GAGCTCTCAGCCTAGCGCAGGCATTACAGTAGAGTTTATAAAACATGTTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCTCAGCCTAGCGCAGGCATTACAGTAGAGTTTATAAAACATGTTT  535

seq1  TGATGAAGTAATCCCCTCTCCCGCCCCGACACGCATCATATATGTGGACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAAGTAATCCCCTCTCCCGCCCCGACACGCATCATATATGTGGACA  585

seq1  AGGAAAGGATACACTTACAACCCAGTCCATCTTTAACAATTGTTCATTCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGGATACACTTACAACCCAGTCCATCTTTAACAATTGTTCATTCA  635

seq1  GAAGAATATAAATTATTCCAGTGCACTATGACTAGGTTGATAGTGTTAAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATATAAATTATTCCAGTGCACTATGACTAGGTTGATAGTGTTAAG  685

seq1  AAACAAATATTATTTACCAGAGTTTGACCTGTTTTGACTCAAACACCTTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATATTATTTACCAGAGTTTGACCTGTTTTGACTCAAACACCTTG  735

seq1  CCCGTGACAGGTCCTCCTGTTTGCCTGCTGGACATTTCTCCAGCTTAGCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTGACAGGTCCTCCTGTTTGCCTGCTGGACATTTCTCCAGCTTAGCC  785

seq1  TCATTCTTCACAGTTCAGAATATCCACCCACTTCAATGCAGATGATGGAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTTCACAGTTCAGAATATCCACCCACTTCAATGCAGATGATGGAT  835

seq1  GAATGCTGGATCGTTTATTCAAGTCCATGAAGTTCACTCAATACCCCTCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCTGGATCGTTTATTCAAGTCCATGAAGTTCACTCAATACCCCTCC  885

seq1  CATGGTCGTCCCATCCACTCTTGACCTTCAGAGTTGTATGTATGCTGTAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTCGTCCCATCCACTCTTGACCTTCAGAGTTGTATGTATGCTGTAC  935

seq1  TTGGATTCCCTCCCATTCCAAATGTAACCCTGACCCCCTTTTCCATGTAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTCCCTCCCATTCCAAATGTAACCCTGACCCCCTTTTCCATGTAG  985

seq1  ACTGCGAAACCACATGGTTTCCAGCTTCCCGAACTCTACAACTAACAACA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCGAAACCACATGGTTTCCAGCTTCCCGAACTCTACAACTAACAACA  1035

seq1  AGCATTTCCAACAGACAGTTACCACTGTCATTTAAATGCAGTTCCCTGGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTCCAACAGACAGTTACCACTGTCATTTAAATGCAGTTCCCTGGA  1085

seq1  AGATGTACATACCTACCATGAGGAAGAAGAAGAAGATGGGAATTC  1143
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTACATACCTACCATGAGGAAGAAGAAGAAGATGGGAATTC  1130


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