BAC Information

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BAC

Clone NameB6Ng01-259K13
Chromosome16 (Build37)
Map Location 74,488,530 - 74,489,663
singlet/doubletsinglet
Overlap genenone
Upstream geneRobo2
Downstream geneLOC665042
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259K13.bB6Ng01-259K13.g
ACCGA064784GA064785
length1,2401,138
definitionB6Ng01-259K13.b B6Ng01-259K13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ggaattctttgtttagctctgagtcccatttttaaatggggttatttgat
tttctggagtccaccttcttgagttctttatatatattggatattagtcc
cctatctgatttaggataggtgtgatggtttgtatattcgtggaccaggg
agtgacaccatctagaggtctggccttgatggaataggtgtgacctggtt
ggaataggtgtgtcactctgggtgggggcttaagaccctcaccctagttg
cctggaagtcagtcttccactagcagcctttggatgaagacttagaactc
tcagctctgcctgtgccatgacagcctggatgctgccatgctcccacctt
gatgataatggactgaacctctgaacctgtaagctataaccaattaaatg
tttttttataagacttgccttggttatagtgtctattcacagcagtaaaa
ccctaactaagacaataggtaaagatcctttcccaatctttttggggcct
ttttgtcttattgactgtgtcttttgccttacagaagctttgcagtttca
tgaggtcccatttgtcaattctcaatcttacagcacaagcgattgctgtt
ctattctgtaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataggtttcactgctctggtttcactccacttagatttaa
cctcagtacaaggagataggaatgatcaattagcattcttgtacatgata
accaccagttgtgccagcaccatatttttaaaatgctgtcttttttccac
tggatggttttagctcccttgtcaaagatcaagtgaccataggtgtgtgg
gtttatttctgggtcttcaattctattccattggtctacttgtctgttgc
tataccagaaccatacagttttttatcacatttctctgtagtacagcttt
aggtcaggaatggtgatttcacctgaggttcttttatccttgaagaagag
ttttgctatcctaggttttttgttattccagatgaatttgggagattgcc
ctttccaattccgctgaagaattgaatggatttttgatggggattgcaat
tgaattctggagatgctttgcagattagccattttttaccattatggttc
tgcatcctatgagccatgggggactcatcttctgagacttctttattgct
tccttagagagactcgtgaagactgcttattacgtatcac
gaattccaatcatgttttcatcgcatagcaaagtttgtgcgtttgcaagg
ccatccctgcactcaactcctgaattgacaaaaatgaaaaattgagtctt
cagccttgtaaatctcatatagctccagcaatagaagcatcaattgtgaa
attaaaatcctccctgagtgctttttaaagggaaaataattctgatttat
tttttttaatttaattttatttttttacttattcactttacatcccactc
actgacccttcttggtcaccccctcccacattcttccccccccccattct
tcctcctccttgcctctgaacgaacacctcccaccccaggtagccctcac
cctggcacttcacgtctctgcaaggctaggcacttcctctcccattaaag
ccagacaaacaaagcgcctagctattagaaaatatcacaaatacaggcaa
cagcatttgggacaacccctgctccagttgttagggacccacatgaagtc
aaagctgcacatctgctacatatgtgtgtggaggcccaggaccaacctct
gtgtgttttcttgttggtggttcagactcgaagatagcactgatatttta
ataataagaacaaaaaaacccaattacttctatcattgtctattgatata
aaatagcagagtgcctgtaactgcacactcagtatcattgacattgacct
acaatccattggcagcagaagggctaaagagcacatagatactttcattc
tgcctatattactttgcagtatttatatctccatttacagatttgtgttc
aatatttagctacagcaatttcaaacacagcaggactgttacctcttaaa
ttcactcatatagctttggcatagtttattttctgggtttcaaaatgtgt
atacaaggaaaatactacgtgacataaaatttatagtttctttcattctt
ttagtttcttaaaatatgacgtgtttacatattgtgctaaattttttttt
tggaaatatactgcgataaaatttaaacttccccccccaattttttttag
aatataagaaaaatgtgttttgtttggctcaaagaatatatgatttaagt
attgaatgaattacattggaatgctaaccattttattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_74488530_74489663
seq2: B6Ng01-259K13.g_67_1204

seq1  GAATTCCAATCATGTTTTCATCGCATAGCAAAGTTTGTGCGTTTGCAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATCATGTTTTCATCGCATAGCAAAGTTTGTGCGTTTGCAAGG  50

seq1  CCATCCCTGCACTCAACTCCTGAATTGACAAAAATGAAAAATTGAGTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCCTGCACTCAACTCCTGAATTGACAAAAATGAAAAATTGAGTCTT  100

seq1  CAGCCTTGTAAATCTCATATAGCTCCAGCAATAGAAGCATCAATTGTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTGTAAATCTCATATAGCTCCAGCAATAGAAGCATCAATTGTGAA  150

seq1  ATTAAAATCCTCCCTGAGTGCTTTTTAAAGGGAAAATAATTCTGATTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATCCTCCCTGAGTGCTTTTTAAAGGGAAAATAATTCTGATTTAT  200

seq1  TTTTTTTAATTTAATTTTATTTTTTTACTTATTCACTTTACATCCCACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAATTTAATTTTATTTTTTTACTTATTCACTTTACATCCCACTC  250

seq1  ACTGACCCTTCTTGGTCACCCCCTCCCACATTCTTCCCCCCCCCCATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACCCTTCTTGGTCACCCCCTCCCACATTCTTCCCCCCCCCCATTCT  300

seq1  TCCTCCTCCTTGCCTCTGAACGAACACCTCCCACCCCAGGTAGCCCTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCCTTGCCTCTGAACGAACACCTCCCACCCCAGGTAGCCCTCAC  350

seq1  CCTGGCACTTCACGTCTCTGCAAGGCTAGGCACTTCCTCTCCCATTAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCACTTCACGTCTCTGCAAGGCTAGGCACTTCCTCTCCCATTAAAG  400

seq1  CCAGACAAACAAAGCGCCTAGCTATTAGAAAATATCACAAATACAGGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACAAACAAAGCGCCTAGCTATTAGAAAATATCACAAATACAGGCAA  450

seq1  CAGCATTTGGGACAACCCCTGCTCCAGTTGTTAGGGACCCACATGAAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTTGGGACAACCCCTGCTCCAGTTGTTAGGGACCCACATGAAGTC  500

seq1  AAAGCTGCACATCTGCTACATATGTGTGTGGAGGCCCAGGACCAACCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGCACATCTGCTACATATGTGTGTGGAGGCCCAGGACCAACCTCT  550

seq1  GTGTGTTTTCTTGTTGGTGGTTCAGACTCGAAGATAGCACTGATATTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTTTCTTGTTGGTGGTTCAGACTCGAAGATAGCACTGATATTTTA  600

seq1  ATAATAAGAACAAAAAAACCCAATTACTTCTATCATTGTCTATTGATATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAGAACAAAAAAACCCAATTACTTCTATCATTGTCTATTGATATA  650

seq1  AAATAGCAGAGTGCCTGTAACTGCACACTCAGTATCATTGACATTGACCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGCAGAGTGCCTGTAACTGCACACTCAGTATCATTGACATTGACCT  700

seq1  ACAATCCATTGGCAGCAGAAGGGCTAAAGAGCACATAGATACTTTCATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCCATTGGCAGCAGAAGGGCTAAAGAGCACATAGATACTTTCATTC  750

seq1  TGCCTATATTACTTTGCAGTATTTATATCTCCATTTACAGATTTGTGTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTATATTACTTTGCAGTATTTATATCTCCATTTACAGATTTGTGTTC  800

seq1  AATATTTAGCTACAGCAA-TTCAAACACAGCAGGACTGTTACCTCTTAAA  849
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AATATTTAGCTACAGCAATTTCAAACACAGCAGGACTGTTACCTCTTAAA  850

seq1  TTCACTCATATAGCTTTGGCATAGTTTATTTTCTGGGTTTCAAAATGTGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTCATATAGCTTTGGCATAGTTTATTTTCTGGGTTTCAAAATGTGT  900

seq1  ATACAAAGAAAATACTACGTGACAT-AAATTTATAGTTTCTTTCATTCTT  948
      |||||| |||||||||||||||||| |||||||||||||||||||||| |
seq2  ATACAAGGAAAATACTACGTGACATAAAATTTATAGTTTCTTTCATTC-T  949

seq1  TTTAGTTTCTTAAAATATGACGTGTTTACAATATGTGCTAAA-ATTTTTT  997
      ||||||||||||||||||||||||||||||   |||||||||  ||||||
seq2  TTTAGTTTCTTAAAATATGACGTGTTTACATATTGTGCTAAATTTTTTTT  999

seq1  TTGGAAATATACTGCGATAAAAATTTAAAACTCCCCCCCCA--TTTTTTT  1045
      |||||||||||||||||| ||||||||||  ||||||||||  |||||||
seq2  TTGGAAATATACTGCGAT-AAAATTTAAACTTCCCCCCCCAATTTTTTTT  1048

seq1  AG-ATATAAGAAAAATGTG-TTTGTTT-GCTCAAAGGATATATGGAATGA  1092
      || |||||||||||||||| ||||||| |||||||| |||||||   | |
seq2  AGAATATAAGAAAAATGTGTTTTGTTTGGCTCAAAGAATATATGATTTAA  1098

seq1  GTATTGATAGAAATACATTGAAAATGCCAAACATTTTTATTT  1134
      |||||||  ||| |||||||  ||||| || || ||||||||
seq2  GTATTGAATGAATTACATTG-GAATGCTAACCA-TTTTATTT  1138