BAC Information

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BAC

Clone NameB6Ng01-261L10
Chromosome16 (Build37)X (Build37)
Map Location 61,274,520 - 61,274,90191,983,438 - 91,983,935
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEpha6, LOC100043804, EG668168, LOC668170, LOC100043524
Downstream geneLOC668183
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261L10.bB6Ng01-261L10.g
ACCGA066313GA066314
length1,001492
definitionB6Ng01-261L10.b B6Ng01-261L10.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(61,274,520 - 61,274,901)(91,983,438 - 91,983,935)
sequence
gaattccaaatagactggaccagaaaagaaattcctcccgacacataatc
atcagaacaacaaatgcactaaataaagatagaatattaaaagcagtaag
ggtaaaagttcaagtaacatataaaggcaagcctatcagaattacaccag
atttttcaccagagactatgaaagccagaagatcctggacagatgttata
cagacactaagagaacacaaatgccatcccaggctactatacacagcaaa
actttcaattactggagatggagaaaccaaagtattccatgactgaacca
aattcacacattatccttccatgaatccagcccttcaaaggataataaca
gaaaaaaaccaatacaaggacagaaacaaggacaatacaaggacagatat
cctcaaggataaaagaacctctggtggaatcaccatgtctgacctaaagc
tgtactacagagcaattgtgattaaaaactgcatggtactggtatagtga
cagacaagtagaccaatggaatagaattgaagacccagaaatgaacccac
acacctatggtcacgtgatctttgacaagggagcaaaaaaccatccagtg
gaaaaaagacagcattttcaacaaatggtactgtcacaactggcagttat
catgtagaagaatgcgaattgatccattcctctctccttgtaataaggtc
aaatctaaatgaagtaaggaactccacataaaaccagagacactgaaact
tatagaggagaaagtagggaaaagcctagaagatatgggtacaggggaaa
attcctgagtagaacagcaaaggcttgtgctgtaagatagagaattgaca
aatgggacctcaaaaaattgcaaagcttcggcaaggcaaaagacaccgtt
caataagacaaaaggaccaccaacagattgggaaaggatcttttacctat
cctaaatcagataggggactaatacccaatatatataaaggaactcaaga
a

ttgtaaattgtgaatacttgagtctcttctttagggtgaaaagtgtttct
agtcaatctgtgtgggaacatcctgcttgttttaaatgtcttatatatta
aaagtatggtcagtatcctccctttacatatacctttggcaaggtggtcc
cctcaccctggactgtgtggttccatcagccttaggatggatggcttcat
tacacagttgatgtcattcacagagagatccgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtccattcagatgtgtaggtggggtcagtgaagggtg
atctagatggctgatgagccagcttcatggtgtggggtaacggatgattc
cctgtgccgtgagaatttcactagaatgtcactaaacagcccaactgcct
catgtgaaattggttgtggacaatctgtgtttgatgagaaatgtgtttga
agaaatttattctgattaataagttaaataagttcttctaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_61274520_61274901
seq2: B6Ng01-261L10.b_51_443

seq1  TCCAAATAGACTTGACCAGAAAAGAATTTCCTCCCTACACATAATAATCA  50
      |||||||||||| ||||||||||||| |||||||| ||||||||| ||||
seq2  TCCAAATAGACTGGACCAGAAAAGAAATTCCTCCCGACACATAATCATCA  50

seq1  AAACAACAAATGCACTAAATAAGGATAGAATACTAAAAGCAGTAAGGGAA  100
       ||||||||||||||||||||| ||||||||| ||||||||||||||| |
seq2  GAACAACAAATGCACTAAATAAAGATAGAATATTAAAAGCAGTAAGGGTA  100

seq1  AAAGGTCAAGTAACATATAAAGGCAAGCCAAGCAGAATTACACCAGATTT  150
      |||| |||||||||||||||||||||||| | ||||||||||||||||||
seq2  AAAGTTCAAGTAACATATAAAGGCAAGCCTATCAGAATTACACCAGATTT  150

seq1  TTCACCAGAGACTATGAAAGCCAGAAGAGCCTGGACAGATGTTATACAGA  200
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTCACCAGAGACTATGAAAGCCAGAAGATCCTGGACAGATGTTATACAGA  200

seq1  CACTAAGAGAACAAAAATTCCAGCCCAGGCTACTATACCCAGCCAAACTC  250
      ||||||||||||| |||| ||| ||||||||||||||| |||| ||||| 
seq2  CACTAAGAGAACACAAATGCCATCCCAGGCTACTATACACAGCAAAACTT  250

seq1  TCAATTACCATAGATGGAGAAACCAAAGTATTCCACAACAAAACCAAATT  300
      ||||||||   ||||||||||||||||||||||||  ||  |||||||||
seq2  TCAATTACTGGAGATGGAGAAACCAAAGTATTCCATGACTGAACCAAATT  300

seq1  CACACATTATCTTTCCATGAATCCAGCCCTTC-AAGGATAATAACAGAAA  349
      ||||||||||| |||||||||||||||||||| |||||||||||||||||
seq2  CACACATTATCCTTCCATGAATCCAGCCCTTCAAAGGATAATAACAGAAA  350

seq1  AAAA--AAAAAAA------AAAAAA--ACAATACAAGGACAGA  382
      ||||  || | ||      ||| ||  ||||||||||||||||
seq2  AAAACCAATACAAGGACAGAAACAAGGACAATACAAGGACAGA  393


seq1: chrX_91983438_91983935
seq2: B6Ng01-261L10.g_69_566 (reverse)

seq1  ATTAGAAGAACTTATTTAACTTATTAATCAGAATAAATTTCTTCAAACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAAGAACTTATTTAACTTATTAATCAGAATAAATTTCTTCAAACAC  50

seq1  ATTTCTCATCAAACACAGATTGTCCACAGCCAATTTCACATGAGGCAGTT  100
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATTTCTCATCAAACACAGATTGTCCACAACCAATTTCACATGAGGCAGTT  100

seq1  GGGCTGTTTAGTGACATTCTAGTGAAATTCTCACGGCACAGGGAATCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGTTTAGTGACATTCTAGTGAAATTCTCACGGCACAGGGAATCATC  150

seq1  CGTTACCCCACACCATGAAGCTGGCTCATCAGCCATCTAGATCACCCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTACCCCACACCATGAAGCTGGCTCATCAGCCATCTAGATCACCCTTC  200

seq1  ACTGACCCCACCTACACATCTGAATGGACACACACACACACACACACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACCCCACCTACACATCTGAATGGACACACACACACACACACACACA  250

seq1  CACACACACACGGATCTCTCTGTGAATGACATCAACTGTGTAATGAAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACGGATCTCTCTGTGAATGACATCAACTGTGTAATGAAGCC  300

seq1  ATCCATCCTAAGGCTGATGGAACCACACAGTCCAGGGTGAGGGGACCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCCTAAGGCTGATGGAACCACACAGTCCAGGGTGAGGGGACCACC  350

seq1  TTGCCAAAGGTATATGTAAAGGGAGGATACTGACCATACTTTTAATATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAAAGGTATATGTAAAGGGAGGATACTGACCATACTTTTAATATAT  400

seq1  AAGACATTTAAAACAAGCAGGATGTTCCCACACAGATTGACTAGAAACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATTTAAAACAAGCAGGATGTTCCCACACAGATTGACTAGAAACAC  450

seq1  TTTTCACCCTAAAGAAGAGACTCAAGTATTCACAATTTACAAGAATTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACCCTAAAGAAGAGACTCAAGTATTCACAATTTACAAGAATTC  498


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