BAC Information

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BAC

Clone NameB6Ng01-262E22
Chromosome16 (Build37)
Map Location 26,031,001 - 26,032,179
singlet/doubletsinglet
Overlap geneLeprel1
Upstream gene5430420C16Rik, Trp63, LOC100043571
Downstream geneCldn1, Cldn16, LOC100043057, Il1rap, Gm606
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262E22.bB6Ng01-262E22.g
ACCGA066759GA066760
length1,174698
definitionB6Ng01-262E22.b B6Ng01-262E22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactaccaacattatttttgtaagaattcattttgtaatctatac
taattttagatttctttactcaaaaatttatattattttctagatgtacc
gataaaatagatcccactggtgatagaaaatatttgtatagaaaacagga
aaaatgaagctgaattagaaggttgcagtcttgtgatatagctacatata
tgggaaaaatctttgctaattcctatataatcttttatatattattctca
ctgtgtctaagaaaacacatcaaattaataactgttcccaaatcaagagc
cttcactggccaaagcttcacagaaactggtgatagcatggtgagatgat
caggattaggatactagggcagctgaggtctctcctgggatgctcagaat
ccacttgacctccagagagtcagccacagctctctgccaccaatatcagc
cccatacactcttaatttaaaacaaacaaacaaacaaacaaacaaaaacc
cctagatatgaagactaactacagagtgaaaagaatgtggaaaaaaacaa
gcataggtggggaagggtcatctaaaatggaagctggcgaattctgagtc
tacaactcaccgaagacttcgagaatgataccagcattaaaactcaaaca
acacttacctccagggcacattaatcactgaaacatagaatacaaaccac
tatatgggccatttacttcttcctctagagaagacaggaatataccttac
agctttcctccaaaaatccactcagatctatcatgccgtgaacagaaata
tttgctataataattcatactttataaacaaatagaagcccaaggtttaa
gaataaatgaggcattgcctttcattacagatttttttttagttgttttg
tcattttccttaacaattgagcaatttaacaatttgttaagaattgacaa
tgtaataaaaatgaacaatttaacaataagggcaaaacatttgagatgac
ctagtgtcatttattgctatgataaataccggatgaaaacagtggcttgt
tatttcagctatatttctaggatacagtcaatcaatgtgaaagtccaagg
cacgagtttataggtagatcatcacattaacattcgatagtccagagcag
tgatgttagatgatgtatacatgt

gaattcttaggatgtgtctgttattcagtaaatgatacagtttcctctgg
cactgatggtactcatattgatgctgactattgtgaagatggaaagagtg
attcagaaagtgaagttttaaatgaacaatgctaggaacaattgtcaccc
gaatcaggtatccatagtagaagcctaggaggaactggcatttctcaaga
agaaaggagagatggttttgaagtgtcattgggaggcaagaacagaaggt
tgcaagaagcatatcctaagacatcctgttagtgccaagatgaacaggaa
ggagatatggtggtttgaataagaatgcttcctataggctcacagtgaag
agttcagctcagagacattgaaaaattccaccaggcacctctcccctcct
agaagagacgggtcagagaggacataggctggaagaaagaggctaattaa
gcccctactatctaattccctatatatcaatcagtttcaagggcacactg
ttccaccaatcatattgtgcctagtggctgatgctctattccacccctgg
aaactgtataaaaactctccaaatgggctgtccagtgtcacctctccttt
gggcacaagacgatgaccccagcatggtggaacaataaattccttttgct
tttgcatcgatccttggctccgagtgtgggagtgggagtgggagtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_26031001_26032179
seq2: B6Ng01-262E22.b_46_1219

seq1  GAATTCACTACCAACATTATTTTTGTAAGAATTCATTTTGTAATCTATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTACCAACATTATTTTTGTAAGAATTCATTTTGTAATCTATAC  50

seq1  TAATTTTAGATTTCTTTACTCAAAAATTTATATTATTTTCTAGATGTACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTAGATTTCTTTACTCAAAAATTTATATTATTTTCTAGATGTACC  100

seq1  GATAAAATAGATCCCACTGGTGATAGAAAATATTTGTATAGAAAACAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAATAGATCCCACTGGTGATAGAAAATATTTGTATAGAAAACAGGA  150

seq1  AAAATGAAGCTGAATTAGAAGGTTGCAGTCTTGTGATATAGCTACATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAAGCTGAATTAGAAGGTTGCAGTCTTGTGATATAGCTACATATA  200

seq1  TGGGAAAAATCTTTGCTAATTCCTATATAATCTTTTATATATTATTCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAAAATCTTTGCTAATTCCTATATAATCTTTTATATATTATTCTCA  250

seq1  CTGTGTCTAAGAAAACACATCAAATTAATAACTGTTCCCAAATCAAGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCTAAGAAAACACATCAAATTAATAACTGTTCCCAAATCAAGAGC  300

seq1  CTTCACTGGCCAAAGCTTCACAGAAACTGGTGATAGCATGGTGAGATGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTGGCCAAAGCTTCACAGAAACTGGTGATAGCATGGTGAGATGAT  350

seq1  CAGGATTAGGATACTAGGGCAGCTGAGGTCTCTCCTGGGATGCTCAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATTAGGATACTAGGGCAGCTGAGGTCTCTCCTGGGATGCTCAGAAT  400

seq1  CCACTTGACCTCCAGAGAGTCAGCCACAGCTCTCTGCCACCAATATCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTGACCTCCAGAGAGTCAGCCACAGCTCTCTGCCACCAATATCAGC  450

seq1  CCCATACACTCTTAATTTAAAACAAACAAACAAACAAACAAACAAAAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATACACTCTTAATTTAAAACAAACAAACAAACAAACAAACAAAAACC  500

seq1  CCTAGATATGAAGACTAACTACAGAGTGAAAAGAATGTGGAAAAAAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGATATGAAGACTAACTACAGAGTGAAAAGAATGTGGAAAAAAACAA  550

seq1  GCATAGGTGGGGAAGGGTCATCTAAAATGGAAGCTGGCGAATTCTGAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGGTGGGGAAGGGTCATCTAAAATGGAAGCTGGCGAATTCTGAGTC  600

seq1  TACAACTCACCGAAGACTTCGAGAATGATACCAGCATTAAAACTCAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACTCACCGAAGACTTCGAGAATGATACCAGCATTAAAACTCAAACA  650

seq1  ACACTTACCTCCAGGGCACATTAATCACTGAAACATAGAATACAAACCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTACCTCCAGGGCACATTAATCACTGAAACATAGAATACAAACCAC  700

seq1  TATATGGGCCATTTACTTCTTCCTCTAGAGAAGACAGGAATATACCTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGGGCCATTTACTTCTTCCTCTAGAGAAGACAGGAATATACCTTAC  750

seq1  AGCTTTCCTCCAAAAATCCACTCAGATCTATCATGCCGTGAACAGAAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCCTCCAAAAATCCACTCAGATCTATCATGCCGTGAACAGAAATA  800

seq1  TTTGCTATAATAATTCATACTTTATAAACAAAATAGAAGCCCAAGGTTTA  850
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTTGCTATAATAATTCATACTTTATAAAC-AAATAGAAGCCCAAGGTTTA  849

seq1  AGAATAAATGAGGCATTGCCTTTCATTACAGA-TTTTTTTTAGTTGTTTT  899
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGAATAAATGAGGCATTGCCTTTCATTACAGATTTTTTTTTAGTTGTTTT  899

seq1  GTCATTTTCCTTAACAATTGAGCAATTTAACAA-TTGTTAAGAATTGACA  948
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GTCATTTTCCTTAACAATTGAGCAATTTAACAATTTGTTAAGAATTGACA  949

seq1  ATGTAAT-AAAATGAACAATTTAACAATAAGGGCAAAACA-TTGAGATGA  996
      ||||||| |||||||||||||||||||||||||||||||| |||||||||
seq2  ATGTAATAAAAATGAACAATTTAACAATAAGGGCAAAACATTTGAGATGA  999

seq1  CCTAGTGTCATTTATTGCTATGATAAAATACCGGATGGAAAACAGGTTGG  1046
      |||||||||||||||||||||||| ||||||||||| ||||||||  |||
seq2  CCTAGTGTCATTTATTGCTATGAT-AAATACCGGAT-GAAAACAG--TGG  1045

seq1  C-TGTTATTTCAGCCTATATTTCTAGGATACAGTCAATCATTGTGGAAAA  1095
      | ||||||||||| |||||||||||||||||||||||||| ||||  |||
seq2  CTTGTTATTTCAG-CTATATTTCTAGGATACAGTCAATCAATGTG--AAA  1092

seq1  GT-CAAAGCACGAGTTTATA-GTAGATAAATCACATT-ACATTC-ATAGT  1141
      || ||| ||||||||||||| ||||||  |||||||| |||||| |||||
seq2  GTCCAAGGCACGAGTTTATAGGTAGAT-CATCACATTAACATTCGATAGT  1141

seq1  CAAGAGCAGGTAGAATGTATAGATGAATGTATACATGT  1179
      | |||||||     |||| |||||| ||||||||||||
seq2  CCAGAGCAG---TGATGT-TAGATG-ATGTATACATGT  1174


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