MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-262J09
Chromosome	16 (Build37)
Map Location	93,228,098 - 93,357,687
singlet/doublet	doublet
Overlap gene	LOC100040747
Upstream gene	Kcne2, 1190017O12Rik, 4930563D23Rik, Kcne1, Dscr1, 2410124H12Rik, Clic6, Runx1, EG666023
Downstream gene	Setd4, LOC670912, Cbr1, EG435489, Cbr3, Dopey2, Morc3, Chaf1b, Cldn14, Sim2, Hlcs
Link	Open Mouse BAC browser

Click to get alignment info.

name	Kcne2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:246133 MGI:1891123
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1190017O12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68936 MGI:1916186
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930563D23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75328 MGI:1922578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcne1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16509 MGI:96673
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dscr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54720 MGI:1890564
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	2410124H12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76785 MGI:1924035
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Clic6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209195 MGI:2146607
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Runx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12394 MGI:99852
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666023 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666023 MGI:3648339
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100040747 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040747
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Setd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224440 MGI:2136890
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC670912 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670912
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	Cbr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12408 MGI:88284
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG435489 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435489 MGI:3646098
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 8 Proteins

name	Cbr3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109857 MGI:1309992
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dopey2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70028 MGI:1917278
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Morc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:338467 MGI:2136841
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chaf1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110749 MGI:1314881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cldn14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56173 MGI:1860425
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sim2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20465 MGI:98307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hlcs (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110948 MGI:894646
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcne2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374181 GeneID:246133 MGI:1891123
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium voltage-gated channel, Isk-related subfamily, gene 2 transcript_id : NM_134110.2

name	1190017O12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124358928 GeneID:68936 MGI:1916186
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1190017O12 gene transcript_id : NM_138743.2

name	4930563D23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113461978 GeneID:75328 MGI:1922578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930563D23 gene transcript_id : NM_029252.2

name	Kcne1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227204 GeneID:16509 MGI:96673
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium voltage-gated channel, Isk-related subfamily, member 1 transcript_id : NM_008424.3

name	Dscr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125656175 GeneID:54720 MGI:1890564
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Down syndrome critical region homolog 1 (human) transcript_id : NM_001081549.1

name	Dscr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125656174 GeneID:54720 MGI:1890564
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Down syndrome critical region homolog 1 (human) transcript_id : NM_019466.3

name	2410124H12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268205 GeneID:76785 MGI:1924035
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 2410124H12 gene transcript_id : XM_001475819.1

name	Clic6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366821 GeneID:209195 MGI:2146607
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chloride intracellular channel 6 transcript_id : NM_172469.2

name	Runx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753297 GeneID:12394 MGI:99852
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : runt related transcription factor 1 transcript_id : NM_009821.1

name	EG666023 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400741 GeneID:666023 MGI:3648339
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG666023 transcript_id : XM_981017.1

name	LOC100040747 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268198 GeneID:100040747
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100040747 transcript_id : XM_001475175.1

name	Setd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803504 GeneID:224440 MGI:2136890
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SET domain containing 4 transcript_id : NM_145482.2

name	LOC670912 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268200 GeneID:670912
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : hypothetical LOC670912 transcript_id : XM_001475221.1

name	Cbr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113680351 GeneID:12408 MGI:88284
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbonyl reductase 1 transcript_id : NM_007620.2

name	EG435489 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400743 GeneID:435489 MGI:3646098
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 8 Proteins product : predicted gene, EG435489 transcript_id : XM_487442.3

name	Cbr3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982073 GeneID:109857 MGI:1309992
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbonyl reductase 3 transcript_id : NM_173047.2

name	Dopey2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62243807 GeneID:70028 MGI:1917278
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dopey family member 2 transcript_id : NM_027293.1

name	Dopey2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62243773 GeneID:70028 MGI:1917278
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dopey family member 2 transcript_id : NM_026700.2

name	Morc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803512 GeneID:338467 MGI:2136841
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microrchidia 3 transcript_id : NM_001045529.2

name	Chaf1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385111 GeneID:110749 MGI:1314881
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chromatin assembly factor 1, subunit B (p60) transcript_id : NM_028083.2

name	Cldn14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328493 GeneID:56173 MGI:1860425
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : claudin 14 transcript_id : NM_019500.3

name	Sim2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119226236 GeneID:20465 MGI:98307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : single-minded homolog 2 (Drosophila) transcript_id : NM_011377.2

name	Hlcs (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803440 GeneID:110948 MGI:894646
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) transcript_id : NM_139145.3

name	Kcne2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19882205 CCDS:CCDS28333.1 GeneID:246133 MGI:1891123
definition	GO_function : GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA] GO_process : GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : minK-related peptide 1; minimum potassium ion channel related peptide 1 product : potassium voltage-gated channel, Isk-related subfamily, gene 2 protein_id : NP_598871.1

name	1190017O12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20270271 GeneID:68936 MGI:1916186
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : hypothetical protein LOC68936 protein_id : NP_620082.1

name	4930563D23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794180 CCDS:CCDS28335.1 GeneID:75328 MGI:1922578
definition	codon_start : 1 product : hypothetical protein LOC75328 protein_id : NP_083528.1

name	Kcne1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680528 CCDS:CCDS28336.1 GeneID:16509 MGI:96673
definition	GO_component : GO:0016324 - apical plasma membrane [Evidence IDA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0002070 - epithelial cell maturation [Evidence IMP]; GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : potassium voltage-gated channel, Isk-related subfamily, member 1 protein_id : NP_032450.1

name	Dscr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125656176 GeneID:54720 MGI:1890564
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0019722 - calcium-mediated signaling [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; myocyte-enriched calcineurin interactin protein 1; calcineurin inhibitor; calcipressin 1 product : calcipressin 1 isoform 1 protein_id : NP_001075018.1

name	Dscr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542574 CCDS:CCDS28337.1 GeneID:54720 MGI:1890564
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0019722 - calcium-mediated signaling [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; myocyte-enriched calcineurin interactin protein 1; calcineurin inhibitor; calcipressin 1 product : calcipressin 1 isoform 2 protein_id : NP_062339.2

name	2410124H12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268206 GeneID:76785 MGI:1924035
definition	codon_start : 1 product : hypothetical protein LOC76785 protein_id : XP_001475869.1

name	Clic6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369633 CCDS:CCDS28338.1 GeneID:209195 MGI:2146607
definition	GO_function : GO:0005254 - chloride channel activity [Evidence IEA]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : chloride intracellular channel 6 protein_id : NP_766057.1

name	Runx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753298 CCDS:CCDS28339.1 GeneID:12394 MGI:99852
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0016563 - transcriptional activator activity [Evidence ISS] GO_process : GO:0048266 - behavioral response to pain [Evidence IMP]; GO:0030097 - hemopoiesis [Evidence TAS]; GO:0048666 - neuron development [Evidence IMP]; GO:0030182 - neuron differentiation [Evidence IMP]; GO:0045766 - positive regulation of angiogenesis [Evidence IMP]; GO:0030854 - positive regulation of granulocyte differentiation [Evidence ISS]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0001501 - skeletal development [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation function : transcription factor note : core binding factor alpha 2; runt domain, alpha subunit 2 product : runt related transcription factor 1 protein_id : NP_033951.1

name	EG666023 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94400742 GeneID:666023 MGI:3648339
definition	codon_start : 1 product : hypothetical protein protein_id : XP_986111.1

name	LOC100040747 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268199 GeneID:100040747
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475225.1

name	Setd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703952 CCDS:CCDS28340.1 GeneID:224440 MGI:2136890
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 exception : mismatches in translation product : SET domain containing 4 protein_id : NP_663457.1

name	LOC670912 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268201 GeneID:670912
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475271.1

name	Cbr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113680352 CCDS:CCDS28341.1 GeneID:12408 MGI:88284
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004090 - carbonyl reductase (NADPH) activity [Evidence TAS]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : carbonyl reductase 1 protein_id : NP_031646.2

name	EG435489 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51830180 GeneID:435489 MGI:3646098
definition	codon_start : 1 product : similar to Carbonyl reductase 1 protein_id : XP_487442.1

name	Cbr3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27413160 CCDS:CCDS28342.1 GeneID:109857 MGI:1309992
definition	codon_start : 1 product : carbonyl reductase 3 protein_id : NP_766635.1

name	Dopey2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62243808 CCDS:CCDS28343.1 GeneID:70028 MGI:1917278
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : pad-1-like isoform 1 protein_id : NP_081569.1

name	Dopey2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15022807 GeneID:70028 MGI:1917278
definition	codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : pad-1-like isoform 2 protein_id : NP_080976.1

name	Morc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113865911 GeneID:338467 MGI:2136841
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : zinc finger, CW-type with coiled-coil domain 3 product : microrchidia 3 protein_id : NP_001038994.1

name	Chaf1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312470 CCDS:CCDS28344.1 GeneID:110749 MGI:1314881
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : CAF-1 subunit B; CAF-I 60 kDa subunit product : chromatin assembly factor 1 subunit B protein_id : NP_082359.1

name	Cldn14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328494 CCDS:CCDS28345.1 GeneID:56173 MGI:1860425
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005923 - tight junction [Evidence ISS] [Evidence IEA] GO_function : GO:0042802 - identical protein binding [Evidence ISS]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence ISS] codon_start : 1 product : claudin 14 protein_id : NP_062373.3

name	Sim2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119226237 GeneID:20465 MGI:98307
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046982 - protein heterodimerization activity [Evidence IPI]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA]; GO:0000155 - two-component sensor activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0009880 - embryonic pattern specification [Evidence IMP]; GO:0030324 - lung development [Evidence IMP]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0007399 - nervous system development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0000160 - two-component signal transduction system (phosphorelay) [Evidence IEA] codon_start : 1 note : single-minded 2 product : single-minded homolog 2 protein_id : NP_035507.2

name	Hlcs (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20982837 CCDS:CCDS28346.1 GeneID:110948 MGI:894646
definition	GO_function : GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]; GO:0004078 - biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity [Evidence IEA]; GO:0004079 - biotin-[methylmalonyl-CoA-carboxytransferase] ligase activity [Evidence IEA]; GO:0004080 - biotin-[propionyl-CoA-carboxylase (ATP-hydrolyzing)] ligase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA] GO_process : GO:0006464 - protein modification [Evidence IEA] codon_start : 1 note : biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase product : holocarboxylase synthetase protein_id : NP_631884.1

clone name	MSMg01-446K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382G16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-291M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158J16
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-262J09.b	B6Ng01-262J09.g
ACC	GA066963	GA066964
length	524	1,138
definition	B6Ng01-262J09.b	B6Ng01-262J09.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(93,228,098 - 93,228,627)	(93,356,557 - 93,357,687)
sequence	aactctaacataagcaattgtaaaatgtgtgtctgaagctaccttttttt tcctatgtaagaatttaattactgtggtctctacttgaccagagtgtaga caacattttagaattgtgttattggttgtatataccacacccatgataat ccgggcacccaacttaattgccaaaaagattttaatttatcttttaaata aagcatatcaaatatatttgacagaggagcttgcatattccatcttggcc agtctccaggaacacagaattttgttcctttcggattcttctttactttg gatgttcccaaatggtttgggcatgactaatttcctgtcctcaacatccc accagctaaacaagataggccaatctagctttaagaggacattaattcta gaaaccaaacccaacaggaaattctatggtcaactacttttaatatacta aaaaattacattgtgttttctaattcatggtctccccaggtataattcca ctgaaggggtgggggtgggggaat	gaattcaaaatttgggaggtgcggatctgtggatgatggggcctgggggc aggaggtgcatcacaggaatcagggcatggactccctcaagctctttaat gtcagcatctcagaatctctttctgccagagacacatgatcaccacggtc cccttctgcctgcatgtcagcaccacagaaggcctgctctcttgcccacc agccatggagtctttggaaagagccatcaagccatggtgtctctggtagg agctatcagcatcagaaatgtccagacaataacttctcttggagaaggga agggaagatcttgcccaaagtgatttttaggagtttgacctgttcctagt atctagtctctgttggctccaaaatcatgtgtcttacctgcctgtgttgc tataaaaacagaacaccacagactggggcattcacaaggaaagaaattaa ttaaccttacagttcttagagttgggagttcaaaaccaagacacctccac tatctgcctagtatcttagccactcctgcaagatggctgtagagggaggg cagttacctcaggacagcaggtgccaggtgaggccgagctcattttgtgt gagatgcctgcgcagtagaaatcaatttgcaacagtgttcttttctaaaa ccccaggatcccactgcctgttactaggttctgcgttccagctgtcagag tgagattatgtttccaatagaccacgtttgaagggaaagttccaaccatc acaccatgcaacactgacctaataatagtcaaaggtgcgtgggggtttgt tttagttaagaatcacagcatgaaacaaatcgcatttatccaatggtggc agcctctctgctttcttctataaaagccctttgtgttggtatatgggagg agatgggtctcgggctcagggtgatgagtagtttctctgtcagtataaca gtgaagtcgtctccttacttgtactgggcaagcccattttggtgacaacc aacaggtacagcttgttcaaataggctctcctgtaaggggttggcttgat gctgctctggtattcaaatgctatatgctgcaccagattctggaatgccc cctgtactaagaatccctacattatcacaaaagatact
quality values	Open. Hide. 19 44 62 62 62 62 62 62 43 44 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 59 59 46 42 35 42 59 59 56 62 62 56 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 62 54 62 62 62 59 62 59 59 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 54 54 54 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 59 59 62 62 62 62 62 62 62 56 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 51 62 62 56 56 56 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 54 58 58 58 58 58 46 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 33 25 16	Open. Hide. 62 47 36 39 62 47 42 62 62 62 43 56 50 38 34 38 44 43 44 56 62 62 62 62 59 59 62 62 62 62 62 62 59 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 59 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 59 59 62 59 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 50 43 37 43 62 62 62 62 62 62 62 62 62 62 62 62 46 46 62 62 62 62 62 62 62 47 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 58 58 58 58 58 36 58 58 58 58 58 58 52 58 45 51 58 58 58 58 58 58 58 58 58 52 58 52 58 58 41 58 58 58 54 58 54 58 58 58 58 47 58 54 52 58 58 52 52 30 22 41 54 58 52 38 49 58 52 38 54 58 52 47 58 50 58 52 39 41 52 58 54 58 58 34 54 47 58 47 58 35 58 58 53 40 53 58 58 58 53 53 53 49 58 54 40 41 30 41 42 58 51 58 58 53 53 54 38 47 58 32 58 38 25 42 53 49 50 51 58 58 54 53 41 29 41 48 50 53 54 52 51 47 51 58 58 48 52 53 39 58 58 44 42 58 58 58 31 31 58 35 32 49 44 40 39 53 51 54 50 58 52 58 51 49 33 45 53 51 32 46 28 32 47 52 40 49 47 51 49 50 52 31 18 51 52 53 39 53 39 25 58 19 30 42 46 32 40 33 53 42 41 32 26 54 35 29 44 27 47 32 32 9 17 26 35 37 47 31 38 54 31 41 53 39 23 54 39 42 54 40 30 37 31 28 25 23 37 39 39 36 37 37 37 47 40 47 52 25 38 52 42 35 52 39 30 32 28 51 37 32 46 31 23 33 37 32 45 33 45 32 42 31 21 44 25 22 51 29 34 34 30 32 41 49 46 49 21 21 51 34 52 31 53 53 8 15 28 53 53 30 32 26 38 22 30 45 23 32 33 32 41 16 25 34 31 51 29 18 25 41 23 31 21 26 30 26 30 51 46 28 24 21 25 10 32 31 26 10 16 30 33 27 33 7 8 33 30 32 30 29 16 31 31 20 46 8 9 31 31 31 23 30 25 31 46 46 31 12 31 46 31 38 48 30 42 31 34 20 30 34 35 23 21 18 21 26 17 46 15 31 31 21 41 18 25 12 28 46 18 23 21 15 23 38 21 11 8 9 19 9 9 33 8 5 9 26 23 30 43 38 33 33 18 29 43 24 21 10 8 5 7 10 27 21 19 8 8 21 33 16 16 12 38 23 24 30 8 9 24 33 25 14 26 14 9 14 9 24 19 18 10 8 26 8 18 7 4 5 48 17 25 39 30 14 25 28 17 11 9 48 48 34 19 28 11 11 12 17 22 23 17 18 7 31 17 9 17 29 6 8 15 13 32 15 17 9 15 4 9 14 18 30 19 4 6 17 10 9 24 7 4 6 7 7 13 7 7 8 24 34 26 15 4 18 15 15 16 15 19 13 14 16 16 13 16 16 8 9 6 13 11 14 5 5 7 13 9 22 27 9 7 6 8 7 7 9 9 5 7 12 13 16 3 5 14 3 2 1 4 5 12 6 12 7 16 12 8 8 7 16 9 30 22 12 5 15 5 18 5 8 11 10 9 11 19 21 10 26 9 6 7 5 4 20 13 4 5 7 4 6 7 23 17 6 5 25 7 9 8 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr16_93228098_93228627
seq2: B6Ng01-262J09.b_43_572

seq1  GAATTCAACTCTAACATAAGCAATTGTAAAATGTGTGTCTGAAGCTACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTCTAACATAAGCAATTGTAAAATGTGTGTCTGAAGCTACCT  50

seq1  TTTTTTTCCTATGTAAGAATTTAATTACTGTGGTCTCTACTTGACCAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCCTATGTAAGAATTTAATTACTGTGGTCTCTACTTGACCAGAG  100

seq1  TGTAGACAACATTTTAGAATTGTGTTATTGGTTGTATATACCACACCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACAACATTTTAGAATTGTGTTATTGGTTGTATATACCACACCCAT  150

seq1  GATAATCCGGGCACCCAACTTAATTGCCAAAAAGATTTTAATTTATCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATCCGGGCACCCAACTTAATTGCCAAAAAGATTTTAATTTATCTTT  200

seq1  TAAATAAAGCATATCAAATATATTTGACAGAGGAGCTTGCATATTCCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAAGCATATCAAATATATTTGACAGAGGAGCTTGCATATTCCATC  250

seq1  TTGGCCAGTCTCCAGGAACACAGAATTTTGTTCCTTTCGGATTCTTCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCAGTCTCCAGGAACACAGAATTTTGTTCCTTTCGGATTCTTCTTT  300

seq1  ACTTTGGATGTTCCCAAATGGTTTGGGCATGACTAATTTCCTGTCCTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGATGTTCCCAAATGGTTTGGGCATGACTAATTTCCTGTCCTCAA  350

seq1  CATCCCACCAGCTAAACAAGATAGGCCAATCTAGCTTTAAGAGGACATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCACCAGCTAAACAAGATAGGCCAATCTAGCTTTAAGAGGACATTA  400

seq1  ATTCTAGAAACCAAACCCAACAGGAAATTCTATGGTCAACTACTTTTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAGAAACCAAACCCAACAGGAAATTCTATGGTCAACTACTTTTAAT  450

seq1  ATACTAAAAAATTACATTGTGTTTTCTAATTCATGGTCTCCCCAGGTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAAAAAATTACATTGTGTTTTCTAATTCATGGTCTCCCCAGGTATA  500

seq1  ATTCCACTGAAGGGGTGGGGGTGGGGGAAT  530
      ||||||||||||||||||||||||||||||
seq2  ATTCCACTGAAGGGGTGGGGGTGGGGGAAT  530

seq1: chr16_93356557_93357687
seq2: B6Ng01-262J09.g_67_1204 (reverse)

seq1  AGTATCTTTTGTGATAA-GTGAGGA-TCTTAGT-CA-GGGGCA-TCCAG-  44
      ||||||||||||||||| ||  ||| ||||||| || |||||| ||||| 
seq2  AGTATCTTTTGTGATAATGTAGGGATTCTTAGTACAGGGGGCATTCCAGA  50

seq1  ATCTTGGGTGCCAGCAT-TAGCATTTGAATA-CAGAGCAGCATCAAGCCA  92
      ||||  |||| |||||| ||||||||||||| ||||||||||||||||||
seq2  ATCT--GGTG-CAGCATATAGCATTTGAATACCAGAGCAGCATCAAGCCA  97

seq1  ACCCCCTACAGAGAAGCCTATTTGAACCAGCTGTACCTGTTGGTTGTCAC  142
      ||||| |||||   ||||||||||||| ||||||||||||||||||||||
seq2  ACCCCTTACAGGAGAGCCTATTTGAACAAGCTGTACCTGTTGGTTGTCAC  147

seq1  CAAAATGGGCTTTGCCAAGTAC-AGTAAGGAAGACGAC-TCACTGTTATA  190
      |||||||||| ||||| ||||| ||||||| ||||||| |||||||||||
seq2  CAAAATGGGC-TTGCCCAGTACAAGTAAGG-AGACGACTTCACTGTTATA  195

seq1  CTGACAGAGAAACTACTCATCACCCTGAGCCCGAGACCCATCTCCT-CCA  239
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTGACAGAGAAACTACTCATCACCCTGAGCCCGAGACCCATCTCCTCCCA  245

seq1  TATACCAACACAAAGGGCTTTTTATAGAAG-AAGCAGAGAGGCTGCCA-C  287
      |||||||||||||||||| ||||||||||| ||||||||||||||||| |
seq2  TATACCAACACAAAGGGC-TTTTATAGAAGAAAGCAGAGAGGCTGCCACC  294

seq1  ATTGGATAAATGCGATTTGTTTCATGCTGTGATTCTTAACTAAAACAAAC  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGATAAATGCGATTTGTTTCATGCTGTGATTCTTAACTAAAACAAAC  344

seq1  CCCCACGCACCTTTGACTATTATTAGGTCAGTGTTGCATGGTGTGATGGT  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACGCACCTTTGACTATTATTAGGTCAGTGTTGCATGGTGTGATGGT  394

seq1  TGGAACTTTCCCTTCAAACGTGGTCTATTGGAAACATAATCTCACTCTGA  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTTTCCCTTCAAACGTGGTCTATTGGAAACATAATCTCACTCTGA  444

seq1  CAGCTGGAACGCAGAACCTAGTAACAGGCAGTGGGATCCTGGGGTTTTAG  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGGAACGCAGAACCTAGTAACAGGCAGTGGGATCCTGGGGTTTTAG  494

seq1  AAAAGAACACTGTTGCAAATTGATTTCTACTGCGCAGGCATCTCACACAA  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAACACTGTTGCAAATTGATTTCTACTGCGCAGGCATCTCACACAA  544

seq1  AATGAGCTCGGCCTCACCTGGCACCTGCTGTCCTGAGGTAACTGCCCTCC  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGCTCGGCCTCACCTGGCACCTGCTGTCCTGAGGTAACTGCCCTCC  594

seq1  CTCTACAGCCATCTTGCAGGAGTGGCTAAGATACTAGGCAGATAGTGGAG  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACAGCCATCTTGCAGGAGTGGCTAAGATACTAGGCAGATAGTGGAG  644

seq1  GTGTCTTGGTTTTGAACTCCCAACTCTAAGAACTGTAAGGTTAATTAATT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTGGTTTTGAACTCCCAACTCTAAGAACTGTAAGGTTAATTAATT  694

seq1  TCTTTCCTTGTGAATGCCCCAGTCTGTGGTGTTCTGTTTTTATAGCAACA  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTTGTGAATGCCCCAGTCTGTGGTGTTCTGTTTTTATAGCAACA  744

seq1  CAGGCAGGTAAGACACATGATTTTGGAGCCAACAGAGACTAGATACTAGG  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGGTAAGACACATGATTTTGGAGCCAACAGAGACTAGATACTAGG  794

seq1  AACAGGTCAAACTCCTAAAAATCACTTTGGGCAAGATCTTCCCTTCCCTT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGTCAAACTCCTAAAAATCACTTTGGGCAAGATCTTCCCTTCCCTT  844

seq1  CTCCAAGAGAAGTTATTGTCTGGACATTTCTGATGCTGATAGCTCCTACC  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAGAGAAGTTATTGTCTGGACATTTCTGATGCTGATAGCTCCTACC  894

seq1  AGAGACACCATGGCTTGATGGCTCTTTCCAAAGACTCCATGGCTGGTGGG  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACCATGGCTTGATGGCTCTTTCCAAAGACTCCATGGCTGGTGGG  944

seq1  CAAGAGAGCAGGCCTTCTGTGGTGCTGACATGCAGGCAGAAGGGGACCGT  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGAGCAGGCCTTCTGTGGTGCTGACATGCAGGCAGAAGGGGACCGT  994

seq1  GGTGATCATGTGTCTCTGGCAGAAAGAGATTCTGAGATGCTGACATTAAA  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATCATGTGTCTCTGGCAGAAAGAGATTCTGAGATGCTGACATTAAA  1044

seq1  GAGCTTGAGGGAGTCCATGCCCTGATTCCTGTGATGCACCTCCTGCCCCC  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTGAGGGAGTCCATGCCCTGATTCCTGTGATGCACCTCCTGCCCCC  1094

seq1  AGGCCCCATCATCCACAGATCCGCACCTCCCAAATTTTGAATTC  1131
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCCATCATCCACAGATCCGCACCTCCCAAATTTTGAATTC  1138

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information