BAC Information

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BAC

Clone NameB6Ng01-263D19
Chromosome16 (Build37)
Map Location 37,807,151 - 37,944,152
singlet/doubletdoublet
Overlap geneFstl1, LOC100043264, Lrrc58, Gpr156, LOC100043271
Upstream geneEaf2, Iqcb1, LOC628101, Golgb1, Hcls1, Fbxo40, LOC100043252, Polq, Stxbp5l, Gtf2e1, Rabl3, Hgd, Ndufb4, LOC100043709
Downstream geneLOC100043713, Gsk3b, Nr1i2, 4932425I24Rik, Cox17, LOC100043715, Popdc2, Pla1a, Adprh, Cd80, LOC667353, Ck-ps3, 4930455C21Rik, 9630046K23Rik, Tmem39a, Cdgap, B4galt4, LOC100043289, Upk1b, 4930435E12Rik, Igsf11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263D19.bB6Ng01-263D19.g
ACCGA067456GA067457
length1,107231
definitionB6Ng01-263D19.b B6Ng01-263D19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,807,151 - 37,808,252)(37,943,922 - 37,944,152)
sequence
gaattcaaacagtccaagggaactgagcatcgtgtacagccgccgtatat
tggaagttggtaaacgaaggctcggagagatgaagctttttcccccgagt
cacactgtataggcggcaggcacatatctagggtccctcccctaggtcca
gcctgcctcttggtgcctgattcagcactgaaatgctctcgccgcctcac
cccagcgtctacccagtcaccgttcactcatcttccattcttcagagcct
ccttcccaggatcctgaatcttcctctgctactctcttggcagctttacc
tttagagccctcgcacgctgagcaagctgctgactacagagaaaggagag
agcctgtaaccctacctgcattgtgcttgccaagccctgtacaccagtct
gctactgcatctgcctggagagaaggtgtcctttctgctcgcagagaccc
ctggtgggctggtgggcacacgctgtgcttgttcttgggttctgtttccg
attttcccgcccctccacagctgccctcagccttcccccccccccaccct
ttctcctgagtccaaaggctcttcttcccccacctctcactcctacaaga
tgacatccagatgtgcatctccttccctatttccagctgccagtggggat
gttctactgcctgcttagactagtgtccatacctgactctgcctaccttg
tgtccccctaccctcttgccaaggctgggtctctgacagagaccttcctc
cacctgatggtccctcaagactaaaggcctccatggctccttccttcccc
aacacccagtatattggcagacctccatattctttagaaagttttaaatg
tccctttaattatgtctctacccttcctcccatgagtggtctcagcatgt
tcccagttcttttcttgtttcttccgtgtatctacagggcttatgggtag
accctgccatactgcagggggtacaacaagcccccttttggcagattaca
ggtgtcaacatgcctgtctcagcaccaagctatgtttagaaatcctctaa
agatgaaggccatggccctcagttccctttaacctaatgctattattcct
cgtgccg
cccactgtgagaattgctttactcctgtaaacaacttaaaaaccagacaa
aacatatgaagcaattttttttcagacattgggcaacagatcataggact
ttagctcctaagagacattctgcctgaaggcagattctgggctggggcgc
aaagagagagaaccaaaccaaacagaaactagatgtcttgctgaagtgtg
tgtgtgtgtgtgtgtgagagagagggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_37807151_37808252
seq2: B6Ng01-263D19.b_47_1153

seq1  GAATTCAAACAGTCCAAGGGAACTGAGCATCGTGTACAGCCGCCGTATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACAGTCCAAGGGAACTGAGCATCGTGTACAGCCGCCGTATAT  50

seq1  TGGAAGTTGGTAAACGAAGGCTCGGAGAGATGAAGCTTTTTCCCCCGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTTGGTAAACGAAGGCTCGGAGAGATGAAGCTTTTTCCCCCGAGT  100

seq1  CACACTGTATAGGCGGCAGGCACATATCTAGGGTCCCTCCCCTAGGTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGTATAGGCGGCAGGCACATATCTAGGGTCCCTCCCCTAGGTCCA  150

seq1  GCCTGCCTCTTGGTGCCTGATTCAGCACTGAAATGCTCTCGCCGCCTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCTCTTGGTGCCTGATTCAGCACTGAAATGCTCTCGCCGCCTCAC  200

seq1  CCCAGCGTCTACCCAGTCACCGTTCACTCATCTTCCATTCTTCAGAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCGTCTACCCAGTCACCGTTCACTCATCTTCCATTCTTCAGAGCCT  250

seq1  CCTTCCCAGGATCCTGAATCTTCCTCTGCTACTCTCTTGGCAGCTTTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCAGGATCCTGAATCTTCCTCTGCTACTCTCTTGGCAGCTTTACC  300

seq1  TTTAGAGCCCTCGCACGCTGAGCAAGCTGCTGACTACAGAGAAAGGAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGCCCTCGCACGCTGAGCAAGCTGCTGACTACAGAGAAAGGAGAG  350

seq1  AGCCTGTAACCCTACCTGCATTGTGCTTGCCAAGCCCTGTACACCAGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGTAACCCTACCTGCATTGTGCTTGCCAAGCCCTGTACACCAGTCT  400

seq1  GCTACTGCATCTGCCTGGAGAGAAGGTGTCCTTTCTGCTCGCAGAGACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTGCATCTGCCTGGAGAGAAGGTGTCCTTTCTGCTCGCAGAGACCC  450

seq1  CTGGTGGGCTGGTGGGCACACGCTGTGCTTGTTCTTGGGTTCTGTTTCCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGGGCTGGTGGGCACACGCTGTGCTTGTTCTTGGGTTCTGTTTCCG  500

seq1  ATTTTCCCGCCCCTCCACAGCTGCCCTCAGCCTTCCCCCCCCCCCACCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCCGCCCCTCCACAGCTGCCCTCAGCCTTCCCCCCCCCCCACCCT  550

seq1  TTCTCCTGAGTCCAAAGGCTCTTCTTCCCCCACCTCTCACTCCTACAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTGAGTCCAAAGGCTCTTCTTCCCCCACCTCTCACTCCTACAAGA  600

seq1  TGACATCCAGATGTGCATCTCCTTCCCTATTTCCAGCTGCCAGTGGGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATCCAGATGTGCATCTCCTTCCCTATTTCCAGCTGCCAGTGGGGAT  650

seq1  GTTCTACTGCCTGCTTAGACTAGTGTCCATACCTGACTCTGCCTACCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTACTGCCTGCTTAGACTAGTGTCCATACCTGACTCTGCCTACCTTG  700

seq1  TGTCCCCCTACCCTCTTGCCAAGGCTGGGTCTCTGACAGAGACCTTCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCCTACCCTCTTGCCAAGGCTGGGTCTCTGACAGAGACCTTCCTC  750

seq1  CACCTGATGGTCCCTCAAGACTAAAGGCCTCCATGGCTCCTTCCTTCCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGATGGTCCCTCAAGACTAAAGGCCTCCATGGCTCCTTCCTTCCCC  800

seq1  AACACCCAGTATATTGGCAGACCTCCATATTCTTTAGAAAGTTTTAAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCCAGTATATTGGCAGACCTCCATATTCTTTAGAAAGTTTTAAATG  850

seq1  T-CCTTTAATTATGTCTCTACCC-TCCTCCCATGAGTGGTCTCAGCATGT  898
      | ||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TCCCTTTAATTATGTCTCTACCCTTCCTCCCATGAGTGGTCTCAGCATGT  900

seq1  TCCCAGTCCTTTCTTTGTTTC-TCCGTGTATCTACAGGGCTTATGGGTAG  947
      ||||||| ||||  ||||||| ||||||||||||||||||||||||||||
seq2  TCCCAGTTCTTTTCTTGTTTCTTCCGTGTATCTACAGGGCTTATGGGTAG  950

seq1  ACCCTGCCATACTGCAGGGGGTACAACAAGCCCCCCTTTGGCAGGATTAC  997
      ||||||||||||||||||||||||||||||||||| ||||||| ||||||
seq2  ACCCTGCCATACTGCAGGGGGTACAACAAGCCCCCTTTTGGCA-GATTAC  999

seq1  AGGTGTCAACATGCCTGTCTCAGCACCCAGCTATG-TTAGAAA-CCTCTT  1045
      ||||||||||||||||||||||||||| ||||||| ||||||| |||| |
seq2  AGGTGTCAACATGCCTGTCTCAGCACCAAGCTATGTTTAGAAATCCTC-T  1048

seq1  AAAGATGGAGGCCAT-GCCCTCAGTTCCTTTTAAACTTATGCTA-TATTC  1093
      ||||||| ||||||| |||||||||||| ||||| || |||||| |||||
seq2  AAAGATGAAGGCCATGGCCCTCAGTTCCCTTTAACCTAATGCTATTATTC  1098

seq1  CTCGTGCCG  1102
      |||||||||
seq2  CTCGTGCCG  1107

seq1: chr16_37943922_37944152
seq2: B6Ng01-263D19.g_72_302 (reverse)

seq1  CCCCCCCCTCTCTCTCACACACACACACACACACACTTCAGCAAGACATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCTCTCTCTCACACACACACACACACACACTTCAGCAAGACATC  50

seq1  TAGTTTCTGTTTGGTTTGGTTCTCTCTCTTTGCGCCCCAGCCCAGAATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTCTGTTTGGTTTGGTTCTCTCTCTTTGCGCCCCAGCCCAGAATCT  100

seq1  GCCTTCAGGCAGAATGTCTCTTAGGAGCTAAAGTCCTATGATCTGTTGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCAGGCAGAATGTCTCTTAGGAGCTAAAGTCCTATGATCTGTTGCC  150

seq1  CAATGTCTGAAAAAAAATTGCTTCATATGTTTTGTCTGGTTTTTAAGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTCTGAAAAAAAATTGCTTCATATGTTTTGTCTGGTTTTTAAGTTG  200

seq1  TTTACAGGAGTAAAGCAATTCTCACAGTGGG  231
      |||||||||||||||||||||||||||||||
seq2  TTTACAGGAGTAAAGCAATTCTCACAGTGGG  231